FC921241

Overview
NameFC921241
Unique NameFC921241
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length708
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921241 vs. ExPASy Swiss-Prot
Match: GLIP3_ARATH (GDSL esterase/lipase 3 OS=Arabidopsis thaliana GN=GLIP3 PE=2 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 3.599e-17
Identity = 56/196 (28.57%), Postives = 91/196 (46.43%), Query Frame = 2
Query:  107 AIITFGDSAVDVGNNNYLATL--FKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTSYLNHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGC 688
            A+  FGDS  D GNNNY+ T+  F++N  PYG+      PTGR  +G            +    P  L P         G +FASAG+G     S+L   I+L  QL  +++ +  L    G  ++  +   A+Y+   G+ D+   +  N    K  + E++   ++   +  I+ +Y +G RKFG  ++ P  C
Sbjct:   35 ALFVFGDSLFDAGNNNYINTVSSFRSNIWPYGQTNFKF-PTGRLSDG--------PEKAWLPSIPPNLQPNNGNNQFTYGVSFASAGAG-ALAESFLGMVINLGTQLNNFKDVEKSLRSELGDAETKRVFSRAVYLFHIGANDYFYPFSANSSTFKSNSKEKFVDFVIGNITFVIEEVYKMGGRKFGFLNVGPYEC 220          
BLAST of FC921241 vs. ExPASy Swiss-Prot
Match: GDL63_ARATH (GDSL esterase/lipase At4g16220 OS=Arabidopsis thaliana GN=At4g16220 PE=2 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 6.140e-17
Identity = 47/89 (52.81%), Postives = 53/89 (59.55%), Query Frame = 2
Query:  101 VPAIITFGDSAVDVGNNNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSG 367
            +PA   FGDS V+VGNNNYLATL KAN  P G DF    PTGRF NG+   D     LG     P YL+P   G  +L GAN+A  GSG
Sbjct:   28 IPANFVFGDSLVEVGNNNYLATLAKANNFPNGIDF--GSPTGRFTNGRTIVDIIYQALGSDELTPPYLAPTTRGPLILNGANYAPGGSG 114          
BLAST of FC921241 vs. ExPASy Swiss-Prot
Match: GDL6_ARATH (GDSL esterase/lipase At1g28570 OS=Arabidopsis thaliana GN=At1g28570 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.786e-16
Identity = 63/202 (31.19%), Postives = 99/202 (49.01%), Query Frame = 2
Query:  107 AIITFGDSAVDVGNNNYLA---TLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQAT---GKNLLIGANFASAGSGYDDRTSYLNHA-ISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGS-GSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGC 688
            +II+FGDS  D GN   L+    L K  + PYG  F +H PTGRF NG+L  DF A+ LGF    P Y S  A    G N  +G   A   S  ++R  +  +  +SL  QL  ++E    L           +I++++ ++G  G  D+   ++V   + ++   ++   +++   SS I  + G+G + F V    PLGC
Sbjct:   34 SIISFGDSIADTGNLLALSDPTNLPKVAFLPYGETFFHH-PTGRFSNGRLIIDFIAEFLGFPLVPPFYGSQNANFEKGVNFAVGGATALERSFLEERGIHFPYTNVSLAVQLSSFKESLPNLC--VSPSDCRDMIENSLILMGEIGGNDYNYAFFVGKNIEEI---KELVPLVIETISSAITELIGMGGKTFLVPGEFPLGC 229          
BLAST of FC921241 vs. ExPASy Swiss-Prot
Match: GDL51_ARATH (GDSL esterase/lipase At3g14220 OS=Arabidopsis thaliana GN=At3g14220 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.786e-16
Identity = 65/200 (32.50%), Postives = 99/200 (49.50%), Query Frame = 2
Query:  104 PAIITFGDSAVDVGNNNYLATLF-KANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGS---GYDDRTSYLNHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCL 691
            P + TFGDS+ DVGN  + ++ F  A   PYG D I+  P+GR+ +G +  DF    +G +   P  L P+A   +L  GA+FA AG+   G    T+ +N    +++ L+ ++++  K               +AIY+V  G+ D+L     +P  N V    Q + +L  I           GARKF V +L PLGCL
Sbjct:   31 PILFTFGDSSYDVGNTKFFSSEFDPATTWPYG-DSID-DPSGRWSDGHIVPDFVGRLIGHREPIPPVLDPKA---DLSRGASFAIAGAVVLGSQSTTASMNFGQQISKFLELHKQWTDKER------------AEAIYMVNIGAEDYLNFAKAHPNANTVEQLTQVAHVLQRIPRELTSLYRAGGARKFAVQNLGPLGCL 213          
BLAST of FC921241 vs. ExPASy Swiss-Prot
Match: GDL40_ARATH (GDSL esterase/lipase At2g27360 OS=Arabidopsis thaliana GN=At2g27360 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.580e-15
Identity = 64/203 (31.53%), Postives = 103/203 (50.74%), Query Frame = 2
Query:  107 AIITFGDSAVDVGNNNYLAT---LFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQAT---GKNLLIGANFASAGSGYDDRTSYLNHA-ISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLLNK--VYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGC 688
            +II+FGDS  D GN   L++   L ++ +PPYG  F +H P+GRF +G+L  DF A+ LG     P Y S       G N  +G   A   S  +++ ++ + + ISL  QL+ ++E    L   + S     +I++A  ++G   G    N Y  PL ++  +   ++   +++   SS I  +  +GAR F V    PLGC
Sbjct:   33 SIISFGDSITDTGNLLGLSSPNDLPESAFPPYGETFFHH-PSGRFSDGRLIIDFIAEFLGIPHVPPFYGSKNGNFEKGVNFAVGGATALECSVLEEKGTHCSQSNISLGNQLKSFKESLPYLCG-SSSPDCRDMIENAFILIGEIGG----NDYNFPLFDRKNIEEVKELVPLVITTISSAISELVDMGARTFLVPGNFPLGC 229          
BLAST of FC921241 vs. ExPASy Swiss-Prot
Match: EST_HEVBR (Esterase OS=Hevea brasiliensis PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.580e-15
Identity = 70/218 (32.11%), Postives = 104/218 (47.71%), Query Frame = 2
Query:   68 SKGYAQDAAPLVPAIITFGDSAVDVGNNNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTSYLN-----HAISLTQQLQYYREY--QSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSM---LVNIFSSFIKNMYGLGARKFGVTSLPPLGCL 691
            S  YA +     PAI  FGDS  D G     A  F    PPYG  F  H+ TGR+ +G+L  DF A++      +P YLS  + G N   GA+FA+AGS     T+ +          L  Q   +R++  +S+  +  G   +  + ++  +     + D  QN      LN   T E+ ++    LVN FS+ +K +Y LGAR F + +  P+GCL
Sbjct:   22 SLAYASETCDF-PAIFNFGDSNSDTGGK---AAAFYPLNPPYGETFF-HRSTGRYSDGRLIIDFIAESFNLPYLSP-YLS--SLGSNFKHGADFATAGSTIKLPTTIIPAHGGFSPFYLDVQYSQFRQFIPRSQFIRETGGIFAELVPEEYYFEKALYTFDIGQNDLTEGFLN--LTVEEVNATVPDLVNSFSANVKKIYDLGARTFWIHNTGPIGCL 229          
BLAST of FC921241 vs. ExPASy Swiss-Prot
Match: GDL16_ARATH (GDSL esterase/lipase At1g31550 OS=Arabidopsis thaliana GN=At1g31550 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.369e-15
Identity = 65/204 (31.86%), Postives = 103/204 (50.49%), Query Frame = 2
Query:  107 AIITFGDSAVDVGNNNYLA---TLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASA------GSGYDDRTSYLNHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGS-GSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGC 688
            +II+FGDS  D GN   L+    L  + +PPYG  F +H PTGRF +G+L  DF A+ LG   Y P Y    +T  N   G NFA A       S  +++  +  H  SL  QL+ +++    L  +        +I +A+ ++G  G+ D+   ++    L++V   ++   ++++  SS I  + G+G R F V    PLGC
Sbjct:   36 SIISFGDSIADTGNLLGLSDHNNLPMSAFPPYGETFFHH-PTGRFSDGRLIIDFIAEFLGL-PYVPPYFG--STNGNFEKGVNFAVASATALESSFLEEKGYHCPHNFSLGVQLKIFKQSLPNLCGL--PSDCRDMIGNALILMGEIGANDYNFPFFQLRPLDEV---KELVPLVISTISSAITELIGMGGRTFLVPGGFPLGC 230          
BLAST of FC921241 vs. ExPASy Swiss-Prot
Match: GDL11_ARATH (GDSL esterase/lipase At1g28650 OS=Arabidopsis thaliana GN=At1g28650 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.747e-15
Identity = 60/205 (29.27%), Postives = 101/205 (49.27%), Query Frame = 2
Query:  107 AIITFGDSAVDVGNNNYLAT---LFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTSYLNHA-------ISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGS-GSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGC 688
            +II+FGDS  D GN  +L+    L +A + PYG  F  H P+GR+ +G+L  DF A+ LG   Y P Y   Q    N   G NFA  G+   DR   +          ISL+ QL  +++    L   + ++    ++ D++ ++G  G  D+   ++    +N++   ++   +++   SS I ++  LG + F V    P+GC
Sbjct:   37 SIISFGDSIADTGNYVHLSNVNNLPQAAFLPYGESFF-HPPSGRYSDGRLVIDFIAEFLGL-PYVPPYFGSQNVSFNQ--GINFAVYGATALDRAFLVKQGIKSDFTNISLSVQLNTFKQILPNLC-ASSTRDCREMLGDSLILMGEIGGNDYNYPFFEGKSINEI---KELVPLIIKAISSAIVDLIDLGGKTFLVPGNFPIGC 233          
BLAST of FC921241 vs. ExPASy Swiss-Prot
Match: GDL10_ARATH (GDSL esterase/lipase At1g28610 OS=Arabidopsis thaliana GN=At1g28610 PE=2 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 5.747e-15
Identity = 73/210 (34.76%), Postives = 98/210 (46.67%), Query Frame = 2
Query:  107 AIITFGDSAVDVGN-------NNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAG------SGYDDRTSYLNHA-ISLTQQLQYYREYQSKLAKVAGSKQSA-SIIKDAIYIVGS-GSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGC 688
            +II+FGDS  D GN       N+   T F     PYG  F +H PTGR CNG++  DF A+ LG     P Y S      N   G NFA AG      S  + R  Y  H+ ISL  QL+ ++E    L  + GS      +I +A  I+G  G  DF   ++V    NK    ++   +++   SS I  +  +G R F V    PLGC
Sbjct:   31 SIISFGDSITDTGNLVGLSDRNHLPVTAFL----PYGETFFHH-PTGRSCNGRIIIDFIAEFLGLPHVPPFYGSKNG---NFEKGVNFAVAGATALETSILEKRGIYYPHSNISLGIQLKTFKE---SLPNLCGSPTDCRDMIGNAFIIMGEIGGNDFNFAFFV----NKTSEVKELVPLVITKISSAIVELVDMGGRTFLVPGNFPLGC 225          
BLAST of FC921241 vs. ExPASy Swiss-Prot
Match: GDL91_ARATH (GDSL esterase/lipase At1g28640 OS=Arabidopsis thaliana GN=At1g28640 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.280e-14
Identity = 61/205 (29.76%), Postives = 102/205 (49.76%), Query Frame = 2
Query:  107 AIITFGDSAVDVGNNNYLAT---LFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTSYLNHAI-------SLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGS-GSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGC 688
            +II+FGDS  D GN  +L+    L ++ + PYG  F  H P+GR+ +G+L  DF A+ LG   Y P+Y   Q    +   G NFA  G+   DR   +   I       SL+ QL  +++    L   + S+    ++ D++ ++G  G  D+   ++    +N++   +Q   +++   SS I ++  LG + F V    PLGC
Sbjct:   35 SIISFGDSIADTGNYLHLSDVNHLPQSAFLPYGESFF-HPPSGRYSDGRLIIDFIAEFLGL-PYVPSYFGSQNVSFDQ--GINFAVYGATALDRVFLVGKGIESDFTNVSLSVQLNIFKQILPNLC-TSSSRDCREMLGDSLILMGEIGVNDYNYPFFEGKSINEI---KQLVPLVIKAISSAIVDLIDLGGKTFLVPGNFPLGC 231          
The following BLAST results are available for this feature:
BLAST of FC921241 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
GLIP3_ARATH3.599e-1728.57GDSL esterase/lipase 3 OS=Arabidopsis thaliana GN=... [more]
GDL63_ARATH6.140e-1752.81GDSL esterase/lipase At4g16220 OS=Arabidopsis thal... [more]
GDL6_ARATH1.786e-1631.19GDSL esterase/lipase At1g28570 OS=Arabidopsis thal... [more]
GDL51_ARATH1.786e-1632.50GDSL esterase/lipase At3g14220 OS=Arabidopsis thal... [more]
GDL40_ARATH2.580e-1531.53GDSL esterase/lipase At2g27360 OS=Arabidopsis thal... [more]
EST_HEVBR2.580e-1532.11Esterase OS=Hevea brasiliensis PE=1 SV=1[more]
GDL16_ARATH3.369e-1531.86GDSL esterase/lipase At1g31550 OS=Arabidopsis thal... [more]
GDL11_ARATH5.747e-1529.27GDSL esterase/lipase At1g28650 OS=Arabidopsis thal... [more]
GDL10_ARATH5.747e-1534.76GDSL esterase/lipase At1g28610 OS=Arabidopsis thal... [more]
GDL91_ARATH1.280e-1429.76GDSL esterase/lipase At1g28640 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionC32102G07EF RVDevelopN Citrus clementina cDNA clone C32102G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921241 ID=FC921241; Name=FC921241; organism=Citrus clementina; type=EST; length=708bp
GAAAGTGGATATGTGTTGCGGGAAAACAGTTCTGTTTGTGGTGCTTGCAT
TTGCACTTGCACTTGCAAGCAAAGGGTATGCACAAGATGCAGCACCACTT
GTTCCTGCAATCATAACATTTGGTGATTCTGCTGTAGATGTTGGAAACAA
CAACTATCTTGCCACCCTTTTCAAGGCTAATTACCCTCCTTATGGAAGGG
ACTTTATCAATCATCAACCTACTGGAAGATTTTGCAATGGGAAATTAGCC
ACTGACTTCACTGCTGATACCCTAGGCTTTAAGACTTATGCGCCAGCATA
TCTCAGCCCACAGGCTACAGGGAAAAACCTCCTTATTGGAGCCAACTTTG
CTTCAGCGGGATCTGGTTATGATGACAGGACATCCTACTTAAATCATGCA
ATTTCATTGACTCAGCAGTTGCAGTACTATAGAGAGTACCAGAGTAAGCT
AGCAAAGGTAGCCGGTAGCAAACAATCAGCTTCCATAATCAAGGATGCGA
TATACATAGTGGGTTCTGGGAGTGGTGACTTTCTTCAGAATTACTATGTC
AATCCTTTACTTAACAAAGTCTACACTCCTGAGCAGTATAGCTCAATGCT
TGTCAATATTTTCTCAAGTTTTATTAAGAACATGTATGGATTGGGGGCAA
GAAAATTTGGAGTGACTTCACTGCCACCATTGGGTTGCCTTCAGCAGCAG
AAACTTAT
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