FC921241

Overview
NameFC921241
Unique NameFC921241
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length708
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921241 vs. ExPASy Swiss-Prot
Match: GDL9_ARATH (GDSL esterase/lipase At1g28600 OS=Arabidopsis thaliana GN=At1g28600 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.184e-14
Identity = 67/215 (31.16%), Postives = 101/215 (46.98%), Query Frame = 2
Query:   80 AQDAAPLVPAIITFGDSAVDVGNNNYLAT---LFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAG-----SGYDDRTSYLNHA-ISLTQQLQYYREYQSKLAKVAGSKQSA-SIIKDAIYIVGSGSGDFLQNYYVNPLLNK--VYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGC 688
            ++   P   +II+FGDS  D GN   L+    L    +PPYG  F +H PTGR C+G++  DF A+ +G   Y P Y    +  +N   G NFA AG     S +  +     H  +SL  QL   + ++  L  + GS      +I +A+ ++G   G    N Y  P  N+  V   E+    ++   SS I  + G+G + F V    P+GC
Sbjct:   22 SETPCPNFKSIISFGDSIADTGNLVGLSDRNQLPVTAFPPYGETFFHH-PTGRSCDGRIIMDFIAEFVGL-PYVPPYFG--SKNRNFDKGVNFAVAGATALKSSFLKKRGIQPHTNVSLGVQL---KSFKKSLPNLCGSPSDCRDMIGNALILMGEIGG----NDYNFPFFNRKPVKEVEELVPFVIASISSTITELIGMGGKTFLVPGEFPIGC 225          
BLAST of FC921241 vs. ExPASy Swiss-Prot
Match: GDL53_ARATH (GDSL esterase/lipase At3g26430 OS=Arabidopsis thaliana GN=At3g26430 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.184e-14
Identity = 68/209 (32.54%), Postives = 101/209 (48.33%), Query Frame = 2
Query:  104 PAIITFGDSAVDVGNNNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTSYLNHA----ISLTQQLQYYREY--QSKLAKVAGSKQSASIIK-----DAIYIVGSGSGDFLQNYYVNPLLN--KVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCL 691
            PAI  FGDS  D G  +  A+  +A YP  G+ F  H P+GRF +G+L  DF A+ LG   Y  A+L   + G N   GANFA+AGS      + +  +    ISL  QL  + ++  +S+L +  G      + K      A+Y    G  D      +N   +  K Y P+ +  +     S+ I+ +Y  G R+F + +  PLGCL
Sbjct:   30 PAIFNFGDSNSDTGGLS--ASFGQAPYPN-GQTFF-HSPSGRFSDGRLIIDFIAEELGL-PYLNAFL--DSIGSNFSHGANFATAGSTVRPPNATIAQSGVSPISLDVQLVQFSDFITRSQLIRNRGGVFKKLLPKKEYFSQALYTFDIGQNDLTAGLKLNMTSDQIKAYIPDVHDQL-----SNVIRKVYSKGGRRFWIHNTAPLGCL 226          
BLAST of FC921241 vs. ExPASy Swiss-Prot
Match: GDL21_ARATH (GDSL esterase/lipase At1g54030 OS=Arabidopsis thaliana GN=At1g54030 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.865e-14
Identity = 61/202 (30.20%), Postives = 94/202 (46.53%), Query Frame = 2
Query:  110 IITFGDSAVDVGNNNYLA-TLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGS---GYDDRTSYLNHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLQQQK 703
            +  FGD   D GN  +L+     A++PPYG      Q TGR+ +G +  D+ A  +G    +P  L    T  +   GANFA A +   G    T      ++L+QQ++ + E ++K      S        +AIY++  GS D+L     NP  +     + +   ++    + IK +YG G RKF   +L PLGCL   K
Sbjct:   53 LFVFGDGLYDAGNKQFLSQNRVDASFPPYGVTV--GQATGRWSDGSIVPDYLAKFMGIPKISPILL----TTADFSHGANFAIADATVLGSPPET------MTLSQQVKKFSENKNKWTNQTRS--------EAIYLIYIGSDDYLSYAKSNPSPSDTQK-QAFVDQVITTIKAEIKVVYGSGGRKFAFQNLAPLGCLPAVK 233          
BLAST of FC921241 vs. ExPASy Swiss-Prot
Match: GDL13_ARATH (GDSL esterase/lipase At1g28670 OS=Arabidopsis thaliana GN=At1g28670 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.415e-13
Identity = 61/205 (29.76%), Postives = 99/205 (48.29%), Query Frame = 2
Query:  107 AIITFGDSAVDVGNNNYLAT---LFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTSYLNHAI-------SLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGS-GSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGC 688
            +II+FGDS  D GN  +L+    L ++ + PYG  F  H P+GR  NG+L  DF A+ LG   Y P Y   Q    +   G NFA  G+   DR   L   I       SL+ QL  +++    L   + ++    ++ D++ ++G  G  D+   ++    +N++   ++   ++V   SS I ++  LG + F V    P GC
Sbjct:   35 SIISFGDSIADTGNYLHLSDVNHLPQSAFLPYGESFF-HPPSGRASNGRLIIDFIAEFLGL-PYVPPYFGSQ--NVSFEQGINFAVYGATALDRAFLLGKGIESDFTNVSLSVQLDTFKQILPNLC-ASSTRDCKEMLGDSLILMGEIGGNDYNYPFFEGKSINEI---KELVPLIVKAISSAIVDLIDLGGKTFLVPGGFPTGC 231          
BLAST of FC921241 vs. ExPASy Swiss-Prot
Match: GDL76_ARATH (GDSL esterase/lipase At5g14450 OS=Arabidopsis thaliana GN=At5g14450 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.153e-13
Identity = 64/210 (30.48%), Postives = 95/210 (45.24%), Query Frame = 2
Query:  104 PAIITFGDSAVDVGNNNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTS----YLNHAISLTQQLQYYREYQSKLAKVAGSKQSA---------SIIKDAIYIVGSGSGDFLQNYYVNPLLN-KVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCL 691
            PAI  FGDS  D G    ++  F+    PYG+ F  H+PTGR  +G+L  DF A+ LG   Y  AYL+  + G N   GANFA+ GS    +      Y     SL  Q+  + +++++ A +    +S               A+Y    G  D    +    +   K   P+     +VN  +S ++N+Y  G R F V +  P GCL
Sbjct:   40 PAIYNFGDSNSDTGG---ISAAFEPIRDPYGQGFF-HRPTGRDSDGRLTIDFIAERLGLP-YLSAYLN--SLGSNFRHGANFATGGSTIRRQNETIFQYGISPFSLDMQIAQFDQFKARSALLFTQIKSRYDREKLPRQEEFAKALYTFDIGQNDLSVGFRTMSVDQLKATIPD-----IVNHLASAVRNIYQQGGRTFWVHNTGPFGCL 237          
BLAST of FC921241 vs. ExPASy Swiss-Prot
Match: GDL20_ARATH (GDSL esterase/lipase At1g54020 OS=Arabidopsis thaliana GN=At1g54020 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.118e-13
Identity = 56/195 (28.72%), Postives = 90/195 (46.15%), Query Frame = 2
Query:  110 IITFGDSAVDVGNNNYLATL-FKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTSYLNHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCL 691
            + TFGDS  D GN  +L +     N+ PYG+      P G+F +GK+  DF A  +G     P  L P   G ++  GA+FA   +           +++L QQ++ + +  S              I+ +++++  G  D+  N+  N    +V   + + + + N F S I  +Y  GA KF V  L PLGCL
Sbjct:   34 LFTFGDSNFDAGNKKFLTSAPLPQNFWPYGKS--RDDPKGKFSDGKIVPDFIAKFMGIPHDLPPALKP---GTDVSRGASFAVGSASI---LGSPKDSLALNQQVRKFNQMISNW--------KVDYIQKSVFMISIGMEDYY-NFTKNNPNAEVSAQQAFVTSVTNRFKSDINLLYSSGASKFVVHLLAPLGCL 211          
BLAST of FC921241 vs. ExPASy Swiss-Prot
Match: GDL19_ARATH (GDSL esterase/lipase At1g54010 OS=Arabidopsis thaliana GN=At1g54010 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.118e-13
Identity = 62/200 (31.00%), Postives = 91/200 (45.50%), Query Frame = 2
Query:  101 VPAI--ITFGDSAVDVGNNNYLA-TLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTSYLNHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCL 691
            +PA+   TFGDS  D GN   L  TL    + PYG+      P G+F +G +A DF A  +      P  L P     N+  GA+FA A     D T       SLT   Q  +  Q K A       +   +K +++++  G+ D+L     NP  +   T + + + + N   + I  +Y  GA KF + +L PLGCL
Sbjct:   32 IPAVGLFTFGDSNFDAGNKQTLTKTLLPQTFWPYGKS--RDDPNGKFSDGLIAPDFLAKFMRIPIVIPPALQPNV---NVSRGASFAVA-----DATLLGAPVESLTLNQQVRKFNQMKAAN-----WNDDFVKKSVFMIYIGANDYLNFTKNNPNAD-ASTQQAFVTSVTNKLKNDISLLYSSGASKFVIQTLAPLGCL 215          
BLAST of FC921241 vs. ExPASy Swiss-Prot
Match: GDL57_ARATH (GDSL esterase/lipase At3g48460 OS=Arabidopsis thaliana GN=At3g48460 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.175e-13
Identity = 55/205 (26.83%), Postives = 92/205 (44.88%), Query Frame = 2
Query:  110 IITFGDSAVDVGNNNY---LATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLI----GANFASAGSGYDDRTSYLNHAISL---TQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGS-GSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCL 691
            I  FGDS  D GN+      A     + PPYG  F   +PT R+ +G+L  DF A+++    + P YLS + T  N       G NFA +GS       ++ + +SL    Q ++    +  K  +  G+ Q  S+ KD+++ +G  G  D+         L    + +    + ++ F+ F++ +   G +   V   P  GCL
Sbjct:   39 IYAFGDSFTDTGNSRSGEGPAGFGHLSSPPYGMTFFR-RPTNRYSDGRLTIDFVAESMNL-PFLPPYLSLKTTNANGTATDTHGVNFAVSGSTVIKHAFFVKNNLSLDMTPQSIETELAWFEKYLETLGTNQKVSLFKDSLFWIGEIGVNDYAYT------LGSTVSSDTIRELSISTFTRFLETLLNKGVKYMLVQGHPATGCL 235          
BLAST of FC921241 vs. ExPASy Swiss-Prot
Match: ESM1_ARATH (GDSL esterase/lipase ESM1 OS=Arabidopsis thaliana GN=ESM1 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.198e-12
Identity = 61/208 (29.33%), Postives = 98/208 (47.12%), Query Frame = 2
Query:   77 YAQDAAPLVPAIITFGDSAVDVGNNNYLATL--FKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKT-YAPAYLSPQATGKNLLIGANFASAGSGYDDRTSYLNHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCL 691
            YA +  P V A+ TFGDS  D GN  +L+        Y PYG+      P G+F +G +  DF AD +       P  L P   G ++  G +FA A +           +++L QQ+  ++  +S          + S I+ +++++  G+ D+L     NP  +     + + + ++N   + IK +Y LGA KF V  L PLGCL
Sbjct:   27 YAGEGVPNV-ALFTFGDSYYDAGNKVFLSQRKDLPQTYWPYGKS--RDYPNGKFSDGHIVPDFIADFISIPNGVLPPVLKP---GVDISRGVSFAVADASILGAPV---ESMTLNQQVVKFKNMKSNW--------NDSYIEKSLFMIYIGTEDYLNFTKANPNAD-ASAQQAFVTNVINRLKNDIKLLYSLGASKFVVQLLAPLGCL 216          
BLAST of FC921241 vs. ExPASy Swiss-Prot
Match: GDL8_ARATH (GDSL esterase/lipase At1g28590 OS=Arabidopsis thaliana GN=At1g28590 PE=2 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 2.044e-12
Identity = 65/206 (31.55%), Postives = 98/206 (47.57%), Query Frame = 2
Query:  107 AIITFGDSAVDVGNNNYLAT---LFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTSYLNHA--------ISLTQQLQYYREYQSKLAKVAGSKQSA-SIIKDAIYIVGS-GSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLG 685
            +II+FGDS  D GN   L+    L  + +PPYG  F +H PTGR+ +G+L  DF A+ LGF    P Y    A  K    G NFA AG+   +  S+L           +SL+ QL   R +   L  + GS      +I++A+ ++G  G  D+    +    + +V   E+    ++   SS I  +  +G R F V    P+G
Sbjct:   36 SIISFGDSIADTGNLLGLSDPNDLPASAFPPYGETFFHH-PTGRYSDGRLIIDFIAEFLGFPLVPPFYGCQNANFKK---GVNFAVAGATALE-PSFLEERGIHSTITNVSLSVQL---RSFTESLPNLCGSPSDCRDMIENALILMGEIGGNDYNFALFQRKPVKEV---EELVPFVIATISSAITELVCMGGRTFLVPGNFPIG 230          
The following BLAST results are available for this feature:
BLAST of FC921241 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
GDL9_ARATH2.184e-1431.16GDSL esterase/lipase At1g28600 OS=Arabidopsis thal... [more]
GDL53_ARATH2.184e-1432.54GDSL esterase/lipase At3g26430 OS=Arabidopsis thal... [more]
GDL21_ARATH4.865e-1430.20GDSL esterase/lipase At1g54030 OS=Arabidopsis thal... [more]
GDL13_ARATH1.415e-1329.76GDSL esterase/lipase At1g28670 OS=Arabidopsis thal... [more]
GDL76_ARATH3.153e-1330.48GDSL esterase/lipase At5g14450 OS=Arabidopsis thal... [more]
GDL20_ARATH4.118e-1328.72GDSL esterase/lipase At1g54020 OS=Arabidopsis thal... [more]
GDL19_ARATH4.118e-1331.00GDSL esterase/lipase At1g54010 OS=Arabidopsis thal... [more]
GDL57_ARATH9.175e-1326.83GDSL esterase/lipase At3g48460 OS=Arabidopsis thal... [more]
ESM1_ARATH1.198e-1229.33GDSL esterase/lipase ESM1 OS=Arabidopsis thaliana ... [more]
GDL8_ARATH2.044e-1231.55GDSL esterase/lipase At1g28590 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionC32102G07EF RVDevelopN Citrus clementina cDNA clone C32102G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921241 ID=FC921241; Name=FC921241; organism=Citrus clementina; type=EST; length=708bp
GAAAGTGGATATGTGTTGCGGGAAAACAGTTCTGTTTGTGGTGCTTGCAT
TTGCACTTGCACTTGCAAGCAAAGGGTATGCACAAGATGCAGCACCACTT
GTTCCTGCAATCATAACATTTGGTGATTCTGCTGTAGATGTTGGAAACAA
CAACTATCTTGCCACCCTTTTCAAGGCTAATTACCCTCCTTATGGAAGGG
ACTTTATCAATCATCAACCTACTGGAAGATTTTGCAATGGGAAATTAGCC
ACTGACTTCACTGCTGATACCCTAGGCTTTAAGACTTATGCGCCAGCATA
TCTCAGCCCACAGGCTACAGGGAAAAACCTCCTTATTGGAGCCAACTTTG
CTTCAGCGGGATCTGGTTATGATGACAGGACATCCTACTTAAATCATGCA
ATTTCATTGACTCAGCAGTTGCAGTACTATAGAGAGTACCAGAGTAAGCT
AGCAAAGGTAGCCGGTAGCAAACAATCAGCTTCCATAATCAAGGATGCGA
TATACATAGTGGGTTCTGGGAGTGGTGACTTTCTTCAGAATTACTATGTC
AATCCTTTACTTAACAAAGTCTACACTCCTGAGCAGTATAGCTCAATGCT
TGTCAATATTTTCTCAAGTTTTATTAAGAACATGTATGGATTGGGGGCAA
GAAAATTTGGAGTGACTTCACTGCCACCATTGGGTTGCCTTCAGCAGCAG
AAACTTAT
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