FC921263

Overview
NameFC921263
Unique NameFC921263
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length736
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921263 vs. ExPASy Swiss-Prot
Match: CIPKV_ORYSJ (CBL-interacting protein kinase 31 OS=Oryza sativa subsp. japonica GN=CIPK31 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.558e-16
Identity = 42/89 (47.19%), Postives = 56/89 (62.92%), Query Frame = 2
Query:  401 GKYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMVKHKHIVELHEVMXSKSKIYFAMDLVKGGELF 667
            GKYELGR +G GTFAKV  A+N +  + +A               EQI+REI  MK+VKH ++V L EVM SK++I+  ++ V GGELF
Sbjct:   18 GKYELGRTIGEGTFAKVRFAKNTENDEPVAIKILDKEKVQKHRLVEQIRREICTMKLVKHPNVVRLFEVMGSKARIFIVLEYVTGGELF 106          
BLAST of FC921263 vs. ExPASy Swiss-Prot
Match: CIPKH_ARATH (CBL-interacting serine/threonine-protein kinase 17 OS=Arabidopsis thaliana GN=CIPK17 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.558e-16
Identity = 45/95 (47.37%), Postives = 58/95 (61.05%), Query Frame = 2
Query:  401 GKYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMVKHKHIVELHEVMXSKSKIYFAMDLVKGGELFNRLPRK 685
            GKYELGR LG G  AKV  A +  TG+S A                QIKREI  +K++KH +IV LHEV+ SK+KIY  ++ V GG+LF+R+  K
Sbjct:    9 GKYELGRTLGEGNSAKVKFAIDTLTGESFAIKIIEKSCITRLNVSFQIKREIRTLKVLKHPNIVRLHEVLASKTKIYMVLECVTGGDLFDRIVSK 103          
BLAST of FC921263 vs. ExPASy Swiss-Prot
Match: CIPKE_ARATH (CBL-interacting serine/threonine-protein kinase 14 OS=Arabidopsis thaliana GN=CIPK14 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.238e-15
Identity = 42/102 (41.18%), Postives = 63/102 (61.76%), Query Frame = 2
Query:  377 DDRPTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMVKHKHIVELHEVMXSKSKIYFAMDLVKGGELFNRLPR 682
            ++R   L GKYE+G+++G G FAKVY  R+  TG+S+A                 I+REI++M  ++H  IV L EV+ +KSKI+F M+  KGGELF ++ +
Sbjct:   12 ENRRGQLFGKYEVGKLVGCGAFAKVYHGRSTATGQSVAIKVVSKQRLQKGGLNGNIQREIAIMHRLRHPSIVRLFEVLATKSKIFFVMEFAKGGELFAKVSK 113          
BLAST of FC921263 vs. ExPASy Swiss-Prot
Match: CIPK7_ARATH (CBL-interacting serine/threonine-protein kinase 7 OS=Arabidopsis thaliana GN=CIPK7 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.238e-15
Identity = 43/99 (43.43%), Postives = 66/99 (66.67%), Query Frame = 2
Query:  392 LLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMVKHK-HIVELHEVMXSKSKIYFAMDLVKGGELFNRLPRK 685
            +L GKYELGR LG G+FAKV+LAR++++ + +A                +I REI  M+ ++H  +I+++HEVM +KSKIY  M+L  GGELF+++ R+
Sbjct:   20 ILLGKYELGRRLGSGSFAKVHLARSIESDELVAVKIIEKKKTIESGMEPRIIREIDAMRRLRHHPNILKIHEVMATKSKIYLVMELASGGELFSKVLRR 118          
BLAST of FC921263 vs. ExPASy Swiss-Prot
Match: CIPK4_ARATH (CBL-interacting serine/threonine-protein kinase 4 OS=Arabidopsis thaliana GN=CIPK4 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.758e-15
Identity = 43/99 (43.43%), Postives = 63/99 (63.64%), Query Frame = 2
Query:  389 TLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMV-KHKHIVELHEVMXSKSKIYFAMDLVKGGELFNRLPR 682
            T+L GKYELGR LG G+FAKV++AR++ TG+ +A                +I REI  M+ +  H +++++HEVM +KSKIY  ++   GGELF +L R
Sbjct:   15 TVLLGKYELGRRLGSGSFAKVHVARSISTGELVAIKIIDKQKTIDSGMEPRIIREIEAMRRLHNHPNVLKIHEVMATKSKIYLVVEYAAGGELFTKLIR 113          
BLAST of FC921263 vs. ExPASy Swiss-Prot
Match: PP395_ARATH (Pentatricopeptide repeat-containing protein At5g21222 OS=Arabidopsis thaliana GN=ATC401 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.602e-15
Identity = 37/92 (40.22%), Postives = 60/92 (65.22%), Query Frame = 2
Query:  401 GKYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMVKHKHIVELHEVMXSKSKIYFAMDLVKGGELFNRL 676
            GKYE+GR++G   F K+  A + +TG  +A               EQIKREIS+MK++ H ++V+L+EV+ SK+KIY  ++ + GG+LF+++
Sbjct:   11 GKYEVGRLIGECNFGKLRSAVDTETGDPVALMILDKDKVLKHKMAEQIKREISIMKLINHPNVVQLYEVLASKAKIYIVLEFISGGKLFDKI 102          
BLAST of FC921263 vs. ExPASy Swiss-Prot
Match: CIPK7_ORYSJ (CBL-interacting protein kinase 7 OS=Oryza sativa subsp. japonica GN=CIPK7 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.048e-14
Identity = 43/113 (38.05%), Postives = 65/113 (57.52%), Query Frame = 2
Query:  347 MATSNSNGGGDDRPTLLHGKYELGRMLGHGTFAKVYLARNLQTGK---SMAXXXXXXXXXXXXXXXEQIKREISVMKMVKHKHIVELHEVMXSKSKIYFAMDLVKGGELFNRL 676
            MA + S       P L  GKYELGR+LG GTFAKVY AR+L  G    ++                 ++ RE++ M+ ++H +++ LHEV+ ++SK+Y  M+L  GG+L +RL
Sbjct:    1 MAATKSKAAKKGAPLL--GKYELGRLLGRGTFAKVYHARSLAPGADPVAVKVLDKPDLAAAGAGMATRVLREVAAMRRLRHPNVLRLHEVLATRSKVYLVMELAPGGDLLSRL 111          
BLAST of FC921263 vs. ExPASy Swiss-Prot
Match: CIPKL_ARATH (CBL-interacting serine/threonine-protein kinase 21 OS=Arabidopsis thaliana GN=CIPK21 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.050e-14
Identity = 43/107 (40.19%), Postives = 61/107 (57.01%), Query Frame = 2
Query:  401 GKYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMVKHKHIVELHEVMXSKSKIYFAMDLVKGGELFNRLPRKITR--DVAGLFQ 715
            GKYE+GR +G G FAKV L  +   G  +A                Q+KREI  MK++ H +IV++HEV+ +K+KI   M+ V GG+L +RL R+  +  D   LFQ
Sbjct:   10 GKYEIGRTIGEGNFAKVKLGYDTTNGTYVAVKIIDKALVIQKGLESQVKREIRTMKLLNHPNIVQIHEVIGTKTKICIVMEYVSGGQLSDRLGRQKMKESDARKLFQ 116          
BLAST of FC921263 vs. ExPASy Swiss-Prot
Match: CIPKT_ORYSJ (CBL-interacting protein kinase 29 OS=Oryza sativa subsp. japonica GN=CIPK29 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.582e-13
Identity = 40/115 (34.78%), Postives = 67/115 (58.26%), Query Frame = 2
Query:  392 LLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQ---------IKREISVMKMVKHKHIVELHEVMXSKSKIYFAMDLVKGGELFNRLPR--KITRDVA 703
            +L G+YELG +LG G  AKVYLAR+L TG+ +A                +         I+RE +++  ++H+H++ L E++ ++ K++F +DL  GGELF+ L    ++T D+A
Sbjct:   27 VLLGRYELGGLLGRGASAKVYLARDLLTGRDVAIKSFPNPRHGGGLRGGEEDVLLRPAPIEREAAILPRLRHRHVMRLREILATRKKVHFVLDLAAGGELFSLLDASGRMTEDLA 141          
BLAST of FC921263 vs. ExPASy Swiss-Prot
Match: AMPKA_DICDI (5'-AMP-activated serine/threonine-protein kinase catalytic subunit alpha OS=Dictyostelium discoideum GN=snfA PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.751e-13
Identity = 37/99 (37.37%), Postives = 59/99 (59.60%), Query Frame = 2
Query:  371 GGDDRPTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMVKHKHIVELHEVMXSKSKIYFAMDLVKGGELF 667
            GG ++ + + G Y L + LG G+F KV LA +++TG  +A               E+I+REI  MK+ +H HI++L+EV+ + + I+  M+ V GGELF
Sbjct:   19 GGIEKSSQIIGNYRLDKTLGIGSFGKVKLAEHIRTGVKVAIKILNRTKIKNLKMDEKIRREIQNMKLFRHPHIIKLYEVIETTTDIFMVMEYVTGGELF 117          
The following BLAST results are available for this feature:
BLAST of FC921263 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
CIPKV_ORYSJ5.558e-1647.19CBL-interacting protein kinase 31 OS=Oryza sativa ... [more]
CIPKH_ARATH5.558e-1647.37CBL-interacting serine/threonine-protein kinase 17... [more]
CIPKE_ARATH1.238e-1541.18CBL-interacting serine/threonine-protein kinase 14... [more]
CIPK7_ARATH1.238e-1543.43CBL-interacting serine/threonine-protein kinase 7 ... [more]
CIPK4_ARATH2.758e-1543.43CBL-interacting serine/threonine-protein kinase 4 ... [more]
PP395_ARATH3.602e-1540.22Pentatricopeptide repeat-containing protein At5g21... [more]
CIPK7_ORYSJ1.048e-1438.05CBL-interacting protein kinase 7 OS=Oryza sativa s... [more]
CIPKL_ARATH3.050e-1440.19CBL-interacting serine/threonine-protein kinase 21... [more]
CIPKT_ORYSJ2.582e-1334.78CBL-interacting protein kinase 29 OS=Oryza sativa ... [more]
AMPKA_DICDI5.751e-1337.375'-AMP-activated serine/threonine-protein kinase c... [more]

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Properties
Property NameValue
Genbank descriptionC32103A05EF RVDevelopN Citrus clementina cDNA clone C32103A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921263 ID=FC921263; Name=FC921263; organism=Citrus clementina; type=EST; length=736bp
GAAAGGAAGAGCGAGCAAACAACTCCCGGTAAACACCATCGATAAGCCTT
TGATCAATAGCAACAAATCAAAATCCTTCTCGTCTCCCCCCAAGAAAAAA
TAAATAAGCAAACACTACAAGCCCCTTCAGGGAATGCAGAGAGATGAGAG
GACCTTCGTGGAGATTGCCTGAGCTGTGTTTACGTGCCCAGCGGTGCGTC
GGCGGCCGTAATTGCCACCGGAAACACGTCGAAGACGGGTGATCCTCAAC
CACCACCACAACACAAAAGAAAACCTGAAAGAATTATTTAATTAGCTAAA
CTTGGTACATATATACGTATAAAAGGAAAAAAAAGACCGCGTGGAGATGG
CTACATCAAACAGTAACGGCGGAGGCGATGACAGGCCGACGTTGCTACAT
GGGAAATACGAGCTGGGGCGTATGCTAGGCCACGGAACCTTCGCGAAGGT
GTACCTGGCAAGAAATTTGCAGACGGGGAAAAGCATGGCCATGAAAGTTG
TTGGTAAAGACAAGGTTATCAAGGTGGGCATGATGGAGCAAATCAAGCGT
GAAATCTCTGTCATGAAGATGGTGAAGCACAAGCACATAGTTGAGCTACA
CGAAGTCATGGNCAGTAAGTCCAAGATTTACTTCGCCATGGACCTCGTCA
AAGGCGGCGAGCTGTTCAACAGATTACCAAGGAAGATTACGAGAGATGTT
GCAGGGTTATTTCAGCACTGATTCAGCGTTGATTCT
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