FC921266

Overview
NameFC921266
Unique NameFC921266
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length683
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921266 vs. ExPASy Swiss-Prot
Match: CPR1_DROME (Putative cysteine proteinase CG12163 OS=Drosophila melanogaster GN=CG12163 PE=2 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 8.851e-18
Identity = 53/152 (34.87%), Postives = 77/152 (50.66%), Query Frame = 2
Query:  215 DKLVELFESWMLKHGKSHESTEEKLHRLEIFKDNLKHIDARNRELQITSSYWLGLNEFSDMSHEEFKNKYLTGLKPDDDEFXXXXXXXXXXXXXXXXXNHFLYKNVEDLPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGK 670
            DK+  LF  + ++ G+ + ST E+  RL IF+ NLK I+  N     ++ Y  G+ EF+DM+  E+K +  TGL   D+                            +LP+  DWR+K AVT VKNQ  CG CWAFS    +EG+  + TG+
Sbjct:  302 DKVDHLFYKFQVRFGRRYVSTAERQMRLRIFRQNLKTIEELNANEMGSAKY--GITEFADMTSSEYKER--TGLWQRDEAKATGGSAAVVPAYHG------------ELPKEFDWRQKDAVTQVKNQGSCGSCWAFSVTGNIEGLYAVKTGE 437          
BLAST of FC921266 vs. ExPASy Swiss-Prot
Match: CATLL_FASHE (Cathepsin L-like proteinase OS=Fasciola hepatica GN=Cat-1 PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.972e-17
Identity = 53/159 (33.33%), Postives = 77/159 (48.43%), Query Frame = 2
Query:  173 FSIVGYSLEVLTSTDKLVELFESWMLKHGKSHESTEEKLHRLEIFKDNLKHIDARNRELQI-TSSYWLGLNEFSDMSHEEFKNKYLTGLKPDDDEFXXXXXXXXXXXXXXXXXNHFLYKNVEDLPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEG 646
            F +   ++ VL S D   +L+  W   + K +   +++ HR  I++ N+KHI   N    +   +Y LGLN+F+DM+ EEFK KYLT +    D                         N   +P  +DWR+ G VT VK+Q  CG CWAFS    +EG
Sbjct:    4 FILAVLTVGVLGSND---DLWHQWKRMYNKEYNGADDQ-HRRNIWEKNVKHIQEHNLRHDLGLVTYTLGLNQFTDMTFEEFKAKYLTEMSRASDILSHGVPYEA---------------NNRAVPDKIDWRESGYVTEVKDQGNCGSCWAFSTTGTMEG 143          
BLAST of FC921266 vs. ExPASy Swiss-Prot
Match: CYSP6_DICDI (Cysteine proteinase 6 OS=Dictyostelium discoideum GN=cprF PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.363e-17
Identity = 61/165 (36.97%), Postives = 84/165 (50.91%), Query Frame = 2
Query:  194 LEVLTSTDKLVEL-----FESWMLKHGKSHESTEEKLHRLEIFKDNLKHIDARNRELQITSSYWLGLNEFSDMSHEEFKNKYLTGLKPDDDEFXXXXXXXXXXXXXXXXXNHFLYKNVEDLPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGKS 673
            + V T+  +L EL     F +WM+ H + H S+EE   R  IFK N+ +I+  N +    S   LGLN F+D+++EE++  YL G   D                     +  ++  V+    SVDWR KGAVT +KNQ  CGGCW+FSA  A EG   I  G S
Sbjct:   12 VSVATAKQQLSELQYRNAFTNWMIAHQR-HYSSEEFNGRFNIFKANMDYINEWNTK---GSETVLGLNVFADITNEEYRATYL-GTPFDASSLEMTP-------------SEKVFGGVQ--ANSVDWRAKGAVTPIKNQGECGGCWSFSATGATEGAQYIANGDS 156          
BLAST of FC921266 vs. ExPASy Swiss-Prot
Match: CATK_RAT (Cathepsin K OS=Rattus norvegicus GN=Ctsk PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.737e-17
Identity = 60/164 (36.59%), Postives = 83/164 (50.61%), Query Frame = 2
Query:  203 LTSTDKLVELFESWMLKHGKSHESTEEKLHRLEIFKDNLKHIDARNRELQITS-SYWLGLNEFSDMSHEEFKNKYLTGLK-PDDDEFXXXXXXXXXXXXXXXXXNHFLYKNVED--LPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGKSTAL 682
            L+  + L   +E W   HGK + S  +++ R  I++ NLK I   N E  + + +Y L +N   DM+ EE   K +TGL+ P    F                 N  LY    +  +P S+D+RKKG VT VKNQ  CG CWAFS+  A+EG  +  TGK  AL
Sbjct:   16 LSPEETLDTQWELWKKTHGKQYNSKVDEISRRLIWEKNLKKISVHNLEASLGAHTYELAMNHLGDMTSEEVVQK-MTGLRVPPSRSFS----------------NDTLYTPEWEGRVPDSIDYRKKGYVTPVKNQGQCGSCWAFSSAGALEGQLKKKTGKLLAL 162          
BLAST of FC921266 vs. ExPASy Swiss-Prot
Match: CATK_MOUSE (Cathepsin K OS=Mus musculus GN=Ctsk PE=2 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 2.847e-16
Identity = 59/164 (35.98%), Postives = 82/164 (50.00%), Query Frame = 2
Query:  203 LTSTDKLVELFESWMLKHGKSHESTEEKLHRLEIFKDNLKHIDARNRELQI-TSSYWLGLNEFSDMSHEEFKNKYLTGLK-PDDDEFXXXXXXXXXXXXXXXXXNHFLYKNVED--LPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGKSTAL 682
            L+  + L   +E W   H K + S  +++ R  I++ NLK I A N E  +   +Y L +N   DM+ EE   K +TGL+ P    +                 N  LY    +  +P S+D+RKKG VT VKNQ  CG CWAFS+  A+EG  +  TGK  AL
Sbjct:   16 LSPEEMLDTQWELWKKTHQKQYNSKVDEISRRLIWEKNLKQISAHNLEASLGVHTYELAMNHLGDMTSEEVVQK-MTGLRIPPSRSYS----------------NDTLYTPEWEGRVPDSIDYRKKGYVTPVKNQGQCGSCWAFSSAGALEGQLKKKTGKLLAL 162          
BLAST of FC921266 vs. ExPASy Swiss-Prot
Match: CYSP7_DICDI (Cysteine proteinase 7 OS=Dictyostelium discoideum GN=cprG PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.719e-16
Identity = 56/164 (34.15%), Postives = 79/164 (48.17%), Query Frame = 2
Query:  194 LEVLTSTDKLVEL-----FESWMLKHGKSHESTEEKLHRLEIFKDNLKHIDARNRELQITSSYWLGLNEFSDMSHEEFKNKYLTGLKPDDDEFXXXXXXXXXXXXXXXXXNHFLYKNVEDLPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGK 670
            + V T+  +L E+     F +WM+ H + H S+EE   R  IFK N+ +++  N +    S   LGLN F+D+S+EE++  YL G   D                            + D    VDWR +GAVT +KNQ  CGGCW+FS   A EG   +  GK
Sbjct:   12 VSVATAKQQLSEVEYRNAFTNWMIAHQR-HYSSEEFNGRYNIFKANMDYVNEWNTK---GSETVLGLNVFADISNEEYRATYL-GTPFDASSLEMTESD-----------------KIFDASAQVDWRTQGAVTPIKNQGQCGGCWSFSTTGATEGAQYLANGK 153          
BLAST of FC921266 vs. ExPASy Swiss-Prot
Match: CYSP1_HOMAM (Digestive cysteine proteinase 1 OS=Homarus americanus GN=LCP1 PE=1 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 3.719e-16
Identity = 51/153 (33.33%), Postives = 82/153 (53.59%), Query Frame = 2
Query:  233 FESWMLKHGKSHESTEEKLHRLEIFKDNLKHIDARNRELQITS-SYWLGLNEFSDMSHEEFKNKYLTGLKPDDDEFXXXXXXXXXXXXXXXXXNHFLYKNVEDLPQS--VDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGKSTAL 682
            +E +  K G+ +   EE+ +RL +F DNL++I+  N++ +    +Y L +N+FSDM++E+F N  + G K                          ++ + +  P+S  VDWR KGAVT VK+Q  CG CWAFS    +EG + + TG+  +L
Sbjct:   20 WEEFKGKFGRKYVDLEEERYRLNVFLDNLQYIEEFNKKYERGEVTYNLAINQFSDMTNEKF-NAVMKGYKKGPRPAA-------------------VFTSTDAAPESTEVDWRTKGAVTPVKDQGQCGSCWAFSTTGGIEGQHFLKTGRLVSL 152          
BLAST of FC921266 vs. ExPASy Swiss-Prot
Match: ALEU_HORVU (Thiol protease aleurain OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.719e-16
Identity = 52/150 (34.67%), Postives = 75/150 (50.00%), Query Frame = 2
Query:  233 FESWMLKHGKSHESTEEKLHRLEIFKDNLKHIDARNRELQITSSYWLGLNEFSDMSHEEFKNKYLTGLKPDDDEFXXXXXXXXXXXXXXXXXNHFLYKNVEDLPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGKSTAL 682
            F  + +++GKS+ES  E   R  IF ++L+ + + NR+      Y LG+N FSDMS EEF+   L   +                       NH L ++   LP++ DWR+ G V+ VKNQ  CG CW FS   A+E      TGK+ +L
Sbjct:   61 FARFAVRYGKSYESAAEVRRRFRIFSESLEEVRSTNRK---GLPYRLGINRFSDMSWEEFQATRLGAAQT---------------CSATLAGNH-LMRDAAALPETKDWREDGIVSPVKNQAHCGSCWTFSTTGALEAAYTQATGKNISL 191          
BLAST of FC921266 vs. ExPASy Swiss-Prot
Match: CYSP2_DICDI (Cysteine proteinase 2 OS=Dictyostelium discoideum GN=cprB PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.857e-16
Identity = 52/153 (33.99%), Postives = 78/153 (50.98%), Query Frame = 2
Query:  233 FESWMLKHGKSHESTEEKLHRLEIFKDNLKHIDARNRELQITSSYWLGLNEFSDMSHEEFKNKYLTGLKPDDDEFXXXXXXXXXXXXXXXXXNHFLYKNVEDL---PQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGKSTAL 682
            F  W LK  + + S+E   +R  IFK N+ ++D  N +    S   LGLN F+D+++EE++  YL G + +   +                       NVEDL   P+S+DWR K AVT +K+Q  CG CW+FS   + EG + + T K  +L
Sbjct:   36 FTEWTLKFNRQYSSSEFS-NRYSIFKSNMDYVDNWNSKGD--SQTVLGLNNFADITNEEYRKTYL-GTRVNAHSYNGYDGREVL--------------NVEDLQTNPKSIDWRTKNAVTPIKDQGQCGSCWSFSTTGSTEGAHALKTKKLVSL 170          
BLAST of FC921266 vs. ExPASy Swiss-Prot
Match: CYSP1_MAIZE (Cysteine proteinase 1 OS=Zea mays GN=CCP1 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.857e-16
Identity = 53/150 (35.33%), Postives = 75/150 (50.00%), Query Frame = 2
Query:  233 FESWMLKHGKSHESTEEKLHRLEIFKDNLKHIDARNRELQITSSYWLGLNEFSDMSHEEFKNKYLTGLKPDDDEFXXXXXXXXXXXXXXXXXNHFLYKNVEDLPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGKSTAL 682
            F S++ + GKS++  +E  +RL +FKDNL+   AR  +L +  S   G+ +FSD++  EF+  YL GL+                               + LP   DWR  GAV  VKNQ  CG CW+FSA  A+EG + + TGK   L
Sbjct:   48 FLSFVQRFGKSYKDADEHAYRLSVFKDNLRR--ARRHQL-LDPSAEHGVTKFSDLTPAEFRRTYL-GLRKSRRALLRELGESAHEAPVLP---------TDGLPDDFDWRDHGAVGPVKNQGSCGSCWSFSASGALEGAHYLATGKLEVL 184          
The following BLAST results are available for this feature:
BLAST of FC921266 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
CPR1_DROME8.851e-1834.87Putative cysteine proteinase CG12163 OS=Drosophila... [more]
CATLL_FASHE1.972e-1733.33Cathepsin L-like proteinase OS=Fasciola hepatica G... [more]
CYSP6_DICDI3.363e-1736.97Cysteine proteinase 6 OS=Dictyostelium discoideum ... [more]
CATK_RAT5.737e-1736.59Cathepsin K OS=Rattus norvegicus GN=Ctsk PE=2 SV=1[more]
CATK_MOUSE2.847e-1635.98Cathepsin K OS=Mus musculus GN=Ctsk PE=2 SV=2[more]
CYSP7_DICDI3.719e-1634.15Cysteine proteinase 7 OS=Dictyostelium discoideum ... [more]
CYSP1_HOMAM3.719e-1633.33Digestive cysteine proteinase 1 OS=Homarus america... [more]
ALEU_HORVU3.719e-1634.67Thiol protease aleurain OS=Hordeum vulgare PE=2 SV... [more]
CYSP2_DICDI4.857e-1633.99Cysteine proteinase 2 OS=Dictyostelium discoideum ... [more]
CYSP1_MAIZE4.857e-1635.33Cysteine proteinase 1 OS=Zea mays GN=CCP1 PE=2 SV=... [more]

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Properties
Property NameValue
Genbank descriptionC32103A08EF RVDevelopN Citrus clementina cDNA clone C32103A08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921266 ID=FC921266; Name=FC921266; organism=Citrus clementina; type=EST; length=683bp
GAAGTAATTAACTTGAAGATAAAGGGTGGGGGAGAGAGAGAGAGAGAGAG
AGATGAAAATGTTATCTTCCAATTGTAAGTTGTTGCTTCGTCTTTCTTTG
TGCGTGTCTCTCTTGATGATCATATGCATACGCTGCTCTAGCAGTAGAAC
TCTTCAAGGTCATGATGGTGAGTTCTCCATTGTGGGGTATTCACTAGAGG
TGTTGACATCCACGGACAAGCTGGTTGAGCTATTCGAGTCATGGATGTTG
AAACATGGGAAATCGCATGAAAGCACGGAAGAGAAGTTGCATAGATTGGA
GATATTCAAAGACAACTTGAAGCACATTGATGCGAGGAACAGAGAGCTGC
AAATTACTAGTAGCTATTGGCTTGGTCTGAATGAGTTTTCAGATATGAGC
CACGAAGAGTTCAAGAACAAGTACTTAACAGGACTCAAACCCGATGATGA
TGAGTTCCGCAGAAGGAGTCACCGCGACTCCAGTAGTAGATCTTCTGCTA
GCAGTAGTAATCATTTTTTGTACAAAAATGTAGAGGATTTGCCTCAATCC
GTTGACTGGAGGAAGAAAGGAGCTGTCACTCATGTCAAAAACCAAAATCC
TTGTGGTGGATGTTGGGCATTTTCAGCAGTAGCAGCAGTGGAGGGGATAA
ATCAGATAGTGACGGGAAAATCTACGGCGTTGT
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