FC921266

Overview
NameFC921266
Unique NameFC921266
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length683
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921266 vs. ExPASy Swiss-Prot
Match: CYSP4_DICDI (Cysteine proteinase 4 OS=Dictyostelium discoideum GN=cprD PE=2 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 3.848e-13
Identity = 48/145 (33.10%), Postives = 72/145 (49.66%), Query Frame = 2
Query:  233 FESWMLKHGKSHESTEEKLHRLEIFKDNLKHIDARNRELQITSSYWLGLNEFSDMSHEEFKNKYLTGLKPDDDEFXXXXXXXXXXXXXXXXXNHFLYKNVEDLPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTG 667
            F +WM  H +++ S+EE   R +IFK N+ ++   N +   T    LGLN F+D++++E++  YL G   D                          K       +VDWR +GAVT +KNQ  CGGCW+FS   + EG + I +G
Sbjct:   30 FTNWMQAHQRTY-SSEEFNARYQIFKSNMDYVHQWNSKGGETV---LGLNVFADITNQEYRTTYL-GTPFDGSALIGTEEE----------------KIFSTPAPTVDWRAQGAVTPIKNQGQCGGCWSFSTTGSTEGAHFIASG 153          
BLAST of FC921266 vs. ExPASy Swiss-Prot
Match: ORYC_ORYSJ (Oryzain gamma chain OS=Oryza sativa subsp. japonica GN=Os09g0442300 PE=2 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 5.026e-13
Identity = 46/150 (30.67%), Postives = 70/150 (46.67%), Query Frame = 2
Query:  233 FESWMLKHGKSHESTEEKLHRLEIFKDNLKHIDARNRELQITSSYWLGLNEFSDMSHEEFKNKYLTGLKPDDDEFXXXXXXXXXXXXXXXXXNHFLYKNVEDLPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGKSTAL 682
            F  + ++HGK +    E   R  IF ++L+ + + NR       Y LG+N F+DMS EEF+   L   +                       NH + ++   LP++ DWR+ G V+ VK+Q  CG CW FS   ++E      TGK  +L
Sbjct:   62 FARFAVRHGKRYGDAAEVQRRFRIFSESLELVRSTNRR---GLPYRLGINRFADMSWEEFQASRLGAAQ---------------NCSATLAGNHRM-RDAAALPETKDWREDGIVSPVKDQGHCGSCWTFSTTGSLEAAYTQATGKPVSL 192          
BLAST of FC921266 vs. ExPASy Swiss-Prot
Match: CYSP_TRYCR (Cruzipain OS=Trypanosoma cruzi PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.026e-13
Identity = 47/147 (31.97%), Postives = 66/147 (44.90%), Query Frame = 2
Query:  203 LTSTDKLVELFESWMLKHGKSHESTEEKLHRLEIFKDNLKHIDARNRELQITSSYWLGLNEFSDMSHEEFKNKYLTGLKPDDDEFXXXXXXXXXXXXXXXXXNHFLYKNVEDLPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVE 643
            L + + L   F  +  KHG+ +ES  E+  RL +F++NL                  G+  FSD++ EEF+++Y  G       F                        V   P +VDWR +GAVT VK+Q  CG CWAFSA+  VE
Sbjct:   28 LHAEETLTSQFAEFKQKHGRVYESAAEEAFRLSVFRENLF---LARLHAAANPHATFGVTPFSDLTREEFRSRYHNGAA----HFAAAQERARVPVKV----------EVVGAPAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVE 157          
BLAST of FC921266 vs. ExPASy Swiss-Prot
Match: CATV_NPVOP (Viral cathepsin OS=Orgyia pseudotsugata multicapsid polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.120e-12
Identity = 50/143 (34.97%), Postives = 71/143 (49.65%), Query Frame = 2
Query:  218 KLVELFESWMLKHGKSHESTEEKLHRLEIFKDNLKHIDARNRELQITSSYWLGLNEFSDMSHEEFKNKYLTGLK-PDDDEFXXXXXXXXXXXXXXXXXNHFLYKNVEDLPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVE 643
            K    FE ++ K  K++ S  EKLHR +IF+ NL+ I  +N   Q  S+    +N+FSD+S EE  +KY TGL  P   +                     L +  +  P   DWR+   VT VKNQ  CG CWAF+ + ++E
Sbjct:   23 KAPNYFEDFLHKFNKNYSSESEKLHRFKIFQHNLEEIINKN---QNDSTAQYEINKFSDLSKEEAISKY-TGLSLPHQTQNFCEVV--------------ILDRPPDRGPLEFDWRQFNKVTSVKNQGVCGACWAFATLGSLE 147          
BLAST of FC921266 vs. ExPASy Swiss-Prot
Match: CATV_NPVLD (Viral cathepsin OS=Lymantria dispar multicapsid nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.120e-12
Identity = 46/139 (33.09%), Postives = 68/139 (48.92%), Query Frame = 2
Query:  227 ELFESWMLKHGKSHESTEEKLHRLEIFKDNLKHIDARNRELQITSSYWLGLNEFSDMSHEEFKNKYLTGLKPDDDEFXXXXXXXXXXXXXXXXXNHFLYKNVEDLPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVE 643
            + FES++  + K++ S  EK  R  IFKDNL  I+A+N       +    +N+FSD+S  E   K+ TGL   +                       L +  +  P   DWR++  VT +KNQ  CG CWAF+ +A+VE
Sbjct:   54 DYFESFVENYNKNYTSDWEKNKRYSIFKDNLHEINAKNGNATDGPTATYKINKFSDLSKSELIAKF-TGLSIPE-------------RVSNFCKTIILNQPPDKGPLHFDWREQNKVTSIKNQGACGACWAFATLASVE 178          
BLAST of FC921266 vs. ExPASy Swiss-Prot
Match: CYSP_THEPA (Cysteine proteinase OS=Theileria parva GN=TP03_0285 PE=3 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.462e-12
Identity = 44/145 (30.34%), Postives = 70/145 (48.28%), Query Frame = 2
Query:  233 FESWMLKHGKSHESTEEKLHRLEIFKDNLKHIDARNRELQITSSYWLGLNEFSDMSHEEFKNKYLTGLKPDDDEFXXXXXXXXXXXXXXXXXNHFLYKNVED-------LPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEG 646
            FE +  K+ + H + +E+L+RL  F+ N   +    +E +    Y  G+N FSD++  EF  K    +KP    +                 N     N ++         +++DWR+  +VT VK+Q+ CGGCWAFS V +VEG
Sbjct:  125 FEEFNSKYNRRHATQQERLNRLVTFRSNYLEV----KEQKGDEPYVKGINRFSDLTEREFY-KLFPVMKPPKATYSNGYYLLSHMANKTYLKNLKKALNTDEDVDLAKLTGENLDWRRSSSVTSVKDQSNCGGCWAFSTVGSVEG 264          
BLAST of FC921266 vs. ExPASy Swiss-Prot
Match: CYSP3_CARCN (Cysteine proteinase 3 (Fragment) OS=Carica candamarcensis PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.462e-12
Identity = 31/42 (73.81%), Postives = 35/42 (83.33%), Query Frame = 2
Query:  542 PQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTG 667
            P+S+DWRKKGAVT VKNQ  CG CWAFS +A VEGIN+IV G
Sbjct:    2 PESIDWRKKGAVTPVKNQGSCGSCWAFSTIATVEGINKIVHG 43          
BLAST of FC921266 vs. ExPASy Swiss-Prot
Match: ALEU_ARATH (Thiol protease aleurain OS=Arabidopsis thaliana GN=ALEU PE=1 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.462e-12
Identity = 53/185 (28.65%), Postives = 85/185 (45.95%), Query Frame = 2
Query:  128 IRCSSSRTLQGHDGEFSIVGYSLEVLTSTDKLVELFESWMLKHGKSHESTEEKLHRLEIFKDNLKHIDARNRELQITSSYWLGLNEFSDMSHEEFKNKYLTGLKPDDDEFXXXXXXXXXXXXXXXXXNHFLYKNVEDLPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGKSTAL 682
            IR  S    +  +    I+G S  VL+        F  +  ++GK +++ EE   R  IFK+NL  I + N++     SY LG+N+F+D++ +EF+   L   +                       +H + +    LP++ DWR+ G V+ VK+Q  CG CW FS   A+E       GK  +L
Sbjct:   32 IRMVSDGLREVEESVSQILGQSRHVLS--------FARFTHRYGKKYQNVEEMKLRFSIFKENLDLIRSTNKK---GLSYKLGVNQFADLTWQEFQRTKLGAAQ---------------NCSATLKGSHKVTEAA--LPETKDWREDGIVSPVKDQGGCGSCWTFSTTGALEAAYHQAFGKGISL 188          
BLAST of FC921266 vs. ExPASy Swiss-Prot
Match: CYSP3_DICDI (Cysteine proteinase 3 OS=Dictyostelium discoideum GN=cprC PE=3 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 1.910e-12
Identity = 50/150 (33.33%), Postives = 76/150 (50.67%), Query Frame = 2
Query:  233 FESWMLKHGKSHESTEEKLHRLEIFKDNLKHIDARNRELQITSSYWLGLNEFSDMSHEEFKNKYLTGLKPDDDEFXXXXXXXXXXXXXXXXXNHFLYKNVEDLPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGKSTAL 682
            F  WM  + K++ + +E + R E FK N+ ++   N +    S   LGLN+ +D+S+EE++  YL G +                       N   +K     P +VDWR+K AVT VK+Q  CG C++FS   +VEG+  I TGK  +L
Sbjct:   34 FIDWMRSNNKAY-THKEFMPRYEEFKKNMDYVHNWNSK---GSKTVLGLNQHADLSNEEYRLNYL-GTRAH------IKLNGYHKRNLGLRLNRPQFKQ----PLNVDWREKDAVTPVKDQGQCGSCYSFSTTGSVEGVTAIKTGKLVSL 168          
BLAST of FC921266 vs. ExPASy Swiss-Prot
Match: ERVC_TABDI (Ervatamin-C OS=Tabernaemontana divaricata PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.494e-12
Identity = 32/48 (66.67%), Postives = 36/48 (75.00%), Query Frame = 2
Query:  539 LPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGKSTAL 682
            LP+ +DWRKKGAVT VKNQ  CG CWAFS V+ VE INQI TG   +L
Sbjct:    1 LPEQIDWRKKGAVTPVKNQGSCGSCWAFSTVSTVESINQIRTGNLISL 48          
The following BLAST results are available for this feature:
BLAST of FC921266 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
CYSP4_DICDI3.848e-1333.10Cysteine proteinase 4 OS=Dictyostelium discoideum ... [more]
ORYC_ORYSJ5.026e-1330.67Oryzain gamma chain OS=Oryza sativa subsp. japonic... [more]
CYSP_TRYCR5.026e-1331.97Cruzipain OS=Trypanosoma cruzi PE=1 SV=1[more]
CATV_NPVOP1.120e-1234.97Viral cathepsin OS=Orgyia pseudotsugata multicapsi... [more]
CATV_NPVLD1.120e-1233.09Viral cathepsin OS=Lymantria dispar multicapsid nu... [more]
CYSP_THEPA1.462e-1230.34Cysteine proteinase OS=Theileria parva GN=TP03_028... [more]
CYSP3_CARCN1.462e-1273.81Cysteine proteinase 3 (Fragment) OS=Carica candama... [more]
ALEU_ARATH1.462e-1228.65Thiol protease aleurain OS=Arabidopsis thaliana GN... [more]
CYSP3_DICDI1.910e-1233.33Cysteine proteinase 3 OS=Dictyostelium discoideum ... [more]
ERVC_TABDI2.494e-1266.67Ervatamin-C OS=Tabernaemontana divaricata PE=1 SV=... [more]

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Properties
Property NameValue
Genbank descriptionC32103A08EF RVDevelopN Citrus clementina cDNA clone C32103A08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921266 ID=FC921266; Name=FC921266; organism=Citrus clementina; type=EST; length=683bp
GAAGTAATTAACTTGAAGATAAAGGGTGGGGGAGAGAGAGAGAGAGAGAG
AGATGAAAATGTTATCTTCCAATTGTAAGTTGTTGCTTCGTCTTTCTTTG
TGCGTGTCTCTCTTGATGATCATATGCATACGCTGCTCTAGCAGTAGAAC
TCTTCAAGGTCATGATGGTGAGTTCTCCATTGTGGGGTATTCACTAGAGG
TGTTGACATCCACGGACAAGCTGGTTGAGCTATTCGAGTCATGGATGTTG
AAACATGGGAAATCGCATGAAAGCACGGAAGAGAAGTTGCATAGATTGGA
GATATTCAAAGACAACTTGAAGCACATTGATGCGAGGAACAGAGAGCTGC
AAATTACTAGTAGCTATTGGCTTGGTCTGAATGAGTTTTCAGATATGAGC
CACGAAGAGTTCAAGAACAAGTACTTAACAGGACTCAAACCCGATGATGA
TGAGTTCCGCAGAAGGAGTCACCGCGACTCCAGTAGTAGATCTTCTGCTA
GCAGTAGTAATCATTTTTTGTACAAAAATGTAGAGGATTTGCCTCAATCC
GTTGACTGGAGGAAGAAAGGAGCTGTCACTCATGTCAAAAACCAAAATCC
TTGTGGTGGATGTTGGGCATTTTCAGCAGTAGCAGCAGTGGAGGGGATAA
ATCAGATAGTGACGGGAAAATCTACGGCGTTGT
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