FC921282

Overview
NameFC921282
Unique NameFC921282
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length706
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921282 vs. ExPASy Swiss-Prot
Match: SPA3N_MOUSE (Serine protease inhibitor A3N OS=Mus musculus GN=Serpina3n PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.047e-16
Identity = 58/202 (28.71%), Postives = 101/202 (50.00%), Query Frame = 2
Query:   80 SNQTDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLK----SKSDDQLNTFASELVAVVFADGSPSGGPRLSVANGVWIDKSLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREANMWAEKETNGLVKEVLPPGSVDNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMT 673
            S  TD A SL K + L    D N+VFSP SI   L+++S G+KG TL+++L  LK      S+  ++     L+  +     P    ++S  + ++I+K   +   F++    +Y+A +   DFQ +  +  +  N +  K+T G++KE++    +D  T ++  N +YFK  W   FD   T   +F+      + VP M+
Sbjct:   49 SINTDFAFSLYKELVLKNP-DKNIVFSPLSISAALAVMSLGAKGNTLEEILEGLKFNLTETSEADIHQGFGHLLQRL---NQPKDQVQISTGSALFIEKRQQILTEFQEKAKTLYQAEAFTADFQ-QPRQAKKLINDYVRKQTQGMIKELV--SDLDKRTLMVLVNYIYFKAKWKVPFDPLDTFKSEFYAGKRRPVIVPMMS 243          
BLAST of FC921282 vs. ExPASy Swiss-Prot
Match: ALMM_TAMSI (Alpha-1-antitrypsin-like protein CM55-MM OS=Tamias sibiricus PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.047e-16
Identity = 60/198 (30.30%), Postives = 103/198 (52.02%), Query Frame = 2
Query:   92 DVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKSDDQLNTFASELVAVVFAD-----GSPSGGPRLSVANGVWIDKSLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREANMWAEKETNGLVKEVLPPGSVDNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFM 670
            + ALSL + +A  ++  +N+ FSP SI   L+++S G+KG T  Q+L  L    D  L   A   +   F +       P+   +L+  NG++I ++L L + F + V ++Y + +   +F T   E  ++ N + EK T G + E++    +   T L   N ++FKG W E F+   TK+ DFH+    +++VP M
Sbjct:   51 EFALSLYRVLA-HQSNTTNIFFSPVSIATALAMLSLGTKGDTHTQILEGL----DFNLTEMAEADIHQGFQNLLQTLNRPNTQLQLTSGNGLFIHQNLKLLDKFLEDVKSLYHSEALPTNF-TNTEEARQQINSYVEKGTQGKIVELVK--ELHRDTVLALVNYIFFKGKWEEPFNEEDTKEEDFHVDEATTVRVPMM 240          
BLAST of FC921282 vs. ExPASy Swiss-Prot
Match: A1AT_PAPAN (Alpha-1-antitrypsin (Fragment) OS=Papio anubis GN=SERPINA1 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.047e-16
Identity = 55/197 (27.92%), Postives = 102/197 (51.78%), Query Frame = 2
Query:   92 DVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKSDD----QLNTFASELVAVVFADGSPSGGPRLSVANGVWIDKSLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREANMWAEKETNGLVKEVLPPGSVDNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFM 670
            + A SL + +A  ++  +N+ FSP SI    +++S G+K  T  ++L  L     +    Q++    EL+  +     P    +L+  NG++++KSL + + F + V N+Y + +  V+F+    E  ++ N + EK T G V +++    +D  T     N ++FKG W   F+   T++ DFH+    ++KVP M
Sbjct:   47 EFAFSLYRQLA-HQSNSTNIFFSPVSIATAFAMLSLGTKADTHSEILEGLNFNLTEIPEAQVHEGFQELLRTL---NKPDSQLQLTTGNGLFLNKSLKVVDKFLEDVKNLYHSEAFSVNFED-TEEAKKQINNYVEKGTQGKVVDLVK--ELDRDTVFALVNYIFFKGKWERPFEVEATEEEDFHVDQATTVKVPMM 236          
BLAST of FC921282 vs. ExPASy Swiss-Prot
Match: SPB8_BOVIN (Serpin B8 OS=Bos taurus GN=SERPINB8 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.368e-16
Identity = 53/165 (32.12%), Postives = 84/165 (50.91%), Query Frame = 2
Query:  146 NLVFSPSSIHVLLSLISAGSKGPTLDQLLSFL-KSKSDDQLNTFASELVAVVFADGSPSGGPR--LSVANGVWIDKSLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREANMWAEKETNGLVKEVLPPGSVDNSTRLIFANALYFKGAWNETFDSSKTKDYDF 631
            N+ FSP S+  +L+++  G+KG T  Q+   L  ++S D    F S L  V       + GP+  L  AN ++ +K+      FK+     Y+A   ++ F     E  +  N W  ++T+G + E+L  G+V   T+L+  NA+YFKG WNE FD   T+   F
Sbjct:   27 NVFFSPLSLSSVLTMVLMGAKGNTAAQMSQALCLNESGDVHRGFQSLLREV------STSGPKCLLRTANRLFGEKTCDFLPAFKESCQKFYQADLEELSFAEDTEECRKHINDWVMEKTDGKISEILGAGTVSPLTKLVLVNAIYFKGKWNEQFDRKHTRGMPF 185          
BLAST of FC921282 vs. ExPASy Swiss-Prot
Match: SPA3N_RAT (Serine protease inhibitor A3N OS=Rattus norvegicus GN=Serpina3n PE=1 SV=3)

HSP 1 Score: 86.6557 bits (213), Expect = 1.368e-16
Identity = 60/202 (29.70%), Postives = 101/202 (50.00%), Query Frame = 2
Query:   80 SNQTDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKSDDQLNT-----FASELVAVVFADGSPSGGPRLSVANGVWIDKSLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREANMWAEKETNGLVKEVLPPGSVDNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFM 670
            S  TD A SL K +AL    D N+VFSP SI   L+++S G+KG +++++L  LK    +   T     F   L  +      P    ++S  N ++I+K L +   F++    +Y+A +   DFQ ++ E  +  N +  K+T G ++ ++   ++   T ++  N +YFKG W   FD   T   +F+      +KVP M
Sbjct:   49 SINTDFAFSLYKKLALRNP-DKNVVFSPLSISAALAVVSLGAKGNSMEEILEGLKFNLTETPETEIHRGFGHLLQRL----SQPRDEIQISTGNALFIEKRLQVLAEFQEKAKALYQAEAFTADFQ-QSREAKKLINDYVSKQTQGKIQGLIT--NLAKKTSMVLVNYIYFKGKWKVPFDPRDTFQSEFYSGKRRPVKVPMM 242          
BLAST of FC921282 vs. ExPASy Swiss-Prot
Match: A1AF_RABIT (Alpha-1-antiproteinase F OS=Oryctolagus cuniculus PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.368e-16
Identity = 58/198 (29.29%), Postives = 105/198 (53.03%), Query Frame = 2
Query:   92 DVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLK----SKSDDQLNTFASELVAVVFADGSPSGGPRLSVANGVWIDKSLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREANMWAEKETNGLVKEVLPPGSVDNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMT 673
            + ALSL + VA  E+  +N+ FSP SI +  +++S G+KG T  Q+L  LK      ++ Q++     L+  V     P    +L+  N + + ++L L++ F +   N+Y++ +  VDF+    +   + N   EK T G + +++    +D  T L   N ++FKG W + F+   TK+ DFH+    +++VP M+
Sbjct:   51 EFALSLYREVA-HESNTTNIFFSPVSIALAFAMLSLGAKGDTHTQVLEGLKFNLTETAEAQIHDGFRHLLHTV---NRPDSELQLAARNALVVHENLKLQHKFLEDAKNLYQSEAFLVDFRDPE-QAKTKINSHVEKGTRGKIVDLVQ--ELDARTLLALVNYVFFKGKWEKPFEPENTKEEDFHVNATTTVRVPMMS 241          
BLAST of FC921282 vs. ExPASy Swiss-Prot
Match: SPB10_CALJA (Serpin B10 OS=Callithrix jacchus GN=SERPINB10 PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.786e-16
Identity = 63/234 (26.92%), Postives = 101/234 (43.16%), Query Frame = 2
Query:   59 MDVRESISNQTDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKSDD--------------------------QLNTFASELVAVVFADGSPSGGPRLSVANGVWIDKSLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREANMWAEKETNGLVKEVLPPGSVDNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKK 682
            MD   +  NQ   AL L++ +A   A+  N+ FS  SI   L+++  G+KG T  Q+   L+ K D                              T  SE++        P+    L  AN  + +K+    N + + V   + A    V+F   + ++ +E N W E++T G ++ +L   SVD++TR++  NALYFKG W   F    T +  F +    S  V  M  K+
Sbjct:    1 MDALATSINQ--FALELSQKLA-ESAQGKNIFFSAWSISASLAMVHLGAKGNTAAQMAQVLQFKRDQGVKSDPESEKKRKMEFNLSNSGEIHCNFQTLISEIL-------KPNNDYILKTANATYSEKTYPFHNKYLEDVKTYFGAEPQSVNFVEASDQIRKEINSWVERQTEGKIQNLLSDDSVDSTTRMVLVNALYFKGIWEHQFLVQHTTEKPFRINETTSKPVQMMFMKE 224          
BLAST of FC921282 vs. ExPASy Swiss-Prot
Match: SPB5_XENTR (Serpin B5 OS=Xenopus tropicalis GN=serpinb5 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.333e-16
Identity = 61/186 (32.80%), Postives = 93/186 (50.00%), Query Frame = 2
Query:   89 TDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPT---LDQLLSFLKSKSDDQLNTFASELVAVVFADGSPSGGPRLSVANGVWIDKSLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREANMWAEKETNGLVKEVLPPGSVDNSTRLIFANALYFKGAWNETFDSSKTKDYDFHL 637
            T +A+ + K +    A D N V SP  I   LSLI  GS+G T   L++ L F K K  D    F  +L++   +  S +    L +   V++D S+  K  F       Y      +DF+++A E   + N   ++ T+G  + VL  GS D +T++I   A  FKG W  TF+ S+TK+ DFH+
Sbjct:    9 TALAVDIFKKLCEKSATD-NFVCSPLCISSSLSLIRKGSQGNTASELEKALHFEKVKDPD----FGFQLLSSDISKISSANS--LKLLKRVYVDNSIECKKDFINSAKKPYPLELETIDFKSQAEEARTQINSSVKELTDGNFETVLNEGSCDENTKIIMLGAASFKGKWVYTFNKSETKEMDFHI 187          
BLAST of FC921282 vs. ExPASy Swiss-Prot
Match: Y2246_METAC (Uncharacterized serpin-like protein MA_2246 OS=Methanosarcina acetivorans GN=MA_2246 PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.047e-16
Identity = 48/184 (26.09%), Postives = 88/184 (47.83%), Query Frame = 2
Query:  122 ALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLS-FLKSKSDDQLNTFASELVAVVFADGSPSGGPRLSVANGVWIDKSLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREANMWAEKETNGLVKEVLPPGSVDNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFM 670
            ++ + +D N++FSP SI   +++   G++G T +Q+ + F    +   L   + +++  +    S +    L   N +W+ ++ +L   +     N Y      VDF  +    +   N W E++TN  +K+++P G +   TRL+  N +YF G W + FD   T+   F L NG    V  M
Sbjct:   67 SMVKNEDENVLFSPYSIFSAMAVCYDGTEGSTKEQMSNAFYYPLNKLVLEESSKKMIGTI---NSNNDAYDLETTNALWVLENYTLNEQYVSNAKNYYDGMVTPVDFVNEPEASTDTINKWVEEKTNEKIKKLIPEGEIGPDTRLVITNTIYFNGTWVKEFDPDITRTRSFTLSNGDEKSVSTM 247          
BLAST of FC921282 vs. ExPASy Swiss-Prot
Match: SPB10_CALMO (Serpin B10 OS=Callicebus moloch GN=SERPINB10 PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.047e-16
Identity = 63/234 (26.92%), Postives = 100/234 (42.74%), Query Frame = 2
Query:   59 MDVRESISNQTDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKSDD--------------------------QLNTFASELVAVVFADGSPSGGPRLSVANGVWIDKSLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREANMWAEKETNGLVKEVLPPGSVDNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKK 682
            MD   +  NQ   AL L+K +A   A+  N+ FS  SI   L+++  G+KG T  Q+   L+ K D                              T  SE++        P+    L  AN  + +K+    N + + V   + A    V+F   + ++ +E N W E++T G ++ +L   SV ++TR++  NALYFKG W   F    T +  F +    S  V  M  K+
Sbjct:    1 MDALATSINQ--FALELSKKLA-ESAQGKNIFFSAWSISASLAMVHLGAKGNTAAQMAQVLQFKRDQGVKSDPESEKKRKTEFNLSNSGEIHCNFQTLISEIL-------KPNNDYILKTANAAYSEKTYPFHNKYLEDVKTYFGAEPQSVNFVEASDQIRKEINSWVERQTEGKIQNLLSDDSVGSTTRMVLVNALYFKGIWEHQFLVQNTTEKPFRINETTSKPVQMMFMKE 224          
The following BLAST results are available for this feature:
BLAST of FC921282 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 184
Match NameE-valueIdentityDescription
SPA3N_MOUSE1.047e-1628.71Serine protease inhibitor A3N OS=Mus musculus GN=S... [more]
ALMM_TAMSI1.047e-1630.30Alpha-1-antitrypsin-like protein CM55-MM OS=Tamias... [more]
A1AT_PAPAN1.047e-1627.92Alpha-1-antitrypsin (Fragment) OS=Papio anubis GN=... [more]
SPB8_BOVIN1.368e-1632.12Serpin B8 OS=Bos taurus GN=SERPINB8 PE=2 SV=1[more]
SPA3N_RAT1.368e-1629.70Serine protease inhibitor A3N OS=Rattus norvegicus... [more]
A1AF_RABIT1.368e-1629.29Alpha-1-antiproteinase F OS=Oryctolagus cuniculus ... [more]
SPB10_CALJA1.786e-1626.92Serpin B10 OS=Callithrix jacchus GN=SERPINB10 PE=3... [more]
SPB5_XENTR2.333e-1632.80Serpin B5 OS=Xenopus tropicalis GN=serpinb5 PE=2 S... [more]
Y2246_METAC3.047e-1626.09Uncharacterized serpin-like protein MA_2246 OS=Met... [more]
SPB10_CALMO3.047e-1626.92Serpin B10 OS=Callicebus moloch GN=SERPINB10 PE=3 ... [more]

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Properties
Property NameValue
Genbank descriptionC32103B12EF RVDevelopN Citrus clementina cDNA clone C32103B12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921282 ID=FC921282; Name=FC921282; organism=Citrus clementina; type=EST; length=706bp
GATCTAAAACTTGTCAGTCCGTTTCTTCATCGTTTCCAGAGAGAGTAGTT
TGCAGAGCATGGACGTACGCGAATCAATCAGCAACCAAACCGACGTCGCT
TTGTCTCTAACAAAGCACGTTGCCCTAACCGAAGCTAAAGACTCGAACCT
CGTCTTCTCGCCGTCATCGATCCACGTTCTGCTGAGCCTGATCTCGGCTG
GATCCAAGGGCCCCACTCTCGACCAGTTGCTCTCTTTTCTCAAGTCCAAA
TCCGACGACCAACTTAACACCTTCGCCTCCGAACTCGTCGCCGTCGTTTT
TGCCGACGGAAGTCCTAGCGGCGGGCCCCGCTTGTCCGTGGCCAATGGTG
TTTGGATTGATAAGTCACTTTCTCTCAAGAATACTTTCAAACAGGTTGTG
GACAACGTCTACAAGGCTGCTTCTAATCAAGTCGATTTCCAAACCAAGGC
TGCTGAAGTATCCAGAGAAGCGAACATGTGGGCTGAGAAGGAGACCAATG
GCCTTGTTAAAGAGGTTCTTCCTCCTGGTTCAGTTGACAATTCAACCAGG
CTCATCTTTGCAAATGCACTATACTTCAAAGGAGCTTGGAATGAAACATT
TGATTCATCAAAGACAAAAGACTATGACTTTCACCTTCTCAATGGAGGCT
CCATTAAAGTGCCGTTCATGACTAGCAAGAAGAATCAGTTTGTGAGTGCC
TTTGAT
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