FC921282

Overview
NameFC921282
Unique NameFC921282
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length706
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921282 vs. ExPASy Swiss-Prot
Match: SPB10_RAT (Serpin B10 OS=Rattus norvegicus GN=Serpinb10 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.158e-15
Identity = 55/219 (25.11%), Postives = 97/219 (44.29%), Query Frame = 2
Query:   98 ALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFL-----------------------KSKSDDQLNTFASELVAVVFADGSPSGGPRLSVANGVWIDKSLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREANMWAEKETNGLVKEVLPPGSVDNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKKN 685
            A+  +K +A   A+  N+ FSP  I   L+++  G+KG T  Q+   L                         KS++  + F + L A +   G+      L +AN ++++K+    N + + +   + A    V+F   + ++ +E N W   +T   +  +LP  +VDN T ++  NALYFKG W   F    T +  F +    S  V  M+ K++
Sbjct:   12 AVEFSKKLA-ESAEGRNIFFSPWGISTSLAMVYLGTKGTTAAQMSQVLHFGSIQDFKFGPDSEKKRKMECHSGKSEEMQSDFQT-LTAKILKHGNSYV---LKIANRIYVEKTYLFHNKYLEDMKTYFGAEPQSVNFVEASGQIRKEINSWVGSQTGDKIPNLLPDDAVDNKTTMVLVNALYFKGTWEHQFSVQNTTERPFRINKTTSKPVQMMSMKQS 225          
BLAST of FC921282 vs. ExPASy Swiss-Prot
Match: CBG_SAISC (Corticosteroid-binding globulin OS=Saimiri sciureus GN=SERPINA6 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.158e-15
Identity = 56/201 (27.86%), Postives = 102/201 (50.75%), Query Frame = 2
Query:   80 SNQTDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFL----KSKSDDQLNTFASELVAVVFADGSPSGGPRLSVANGVWIDKSLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREANMWAEKETNGLVKEVLPPGSVDNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFM 670
            S   D A SL KH+     K  N+  SP SI + L+++S G+ G T  QLL  L      KS+ +++     L  ++    S      +++ N +++D SL L  +F   + + Y++    ++FQ  A   SR+ N + + +T G + ++     +++   LI  N ++FKG W + FD + T++ +F++     +KVP M
Sbjct:   41 SVNADFAFSLYKHLVALSPK-KNVFISPVSISMALAMLSLGTCGHTRAQLLHGLGFNLTEKSEAEIHQSFQHLHQLLAESDSSL---EMTLGNALFLDGSLELLESFSADIKHYYESEVLTLNFQDWATTASRQINGYVKSKTQGKIDDLF--SGLNSPAVLILINYIFFKGTWKQPFDLASTREENFYVDETTVVKVPMM 235          
BLAST of FC921282 vs. ExPASy Swiss-Prot
Match: ILEU_HUMAN (Leukocyte elastase inhibitor OS=Homo sapiens GN=SERPINB1 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.512e-15
Identity = 55/201 (27.36%), Postives = 94/201 (46.77%), Query Frame = 2
Query:   83 NQTDVALSLTKHVALTEAKDS-NLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKSDDQLNTFASELVAVVFADGSPSGGPRLSVANGVWIDKSLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREANMWAEKETNGLVKEVLPPGSVDNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKK 682
            +  +   +L   +AL+E   + N+  SP SI   ++++  G++G T  QL       + +++++    L A +   G+      L +AN ++ +K+ +    F       Y A    VDFQ  + +  +  N W + +T G + E+L  G VDN T+L+  NA+YFKG W + F    T +  F L       V  M  KK
Sbjct:    5 SSANTRFALDLFLALSENNPAGNIFISPFSISSAMAMVFLGTRGNTAAQLSKTFHFNTVEEVHSRFQSLNADINKRGASY---ILKLANRLYGEKTYNFLPEFLVSTQKTYGADLASVDFQHASEDARKTINQWVKGQTEGKIPELLASGMVDNMTKLVLVNAIYFKGNWKDKFMKEATTNAPFRLNKKDRKTVKMMYQKK 202          
BLAST of FC921282 vs. ExPASy Swiss-Prot
Match: SPB11_MOUSE (Serpin B11 OS=Mus musculus GN=Serpinb11 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.975e-15
Identity = 53/205 (25.85%), Postives = 95/205 (46.34%), Query Frame = 2
Query:   89 TDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKSDDQL------NTFASELVAVVFAD-----GSPSGGPRLSVANGVWIDKSLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREANMWAEKETNGLVKEVLPPGSVDNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFM 670
            T+  L + K ++     + N+ FSP +    LS++  G++G + +Q+   L   S   +      N+     V V+  D        +    LSVAN ++  +S+S    + +  + +Y+A    VDF+    E  +  N W + +TNG +  +   G++D S+ ++  +A+YFKG W   F   +T    FH+  G S  V  M
Sbjct:    9 TEFCLDVFKELSSNNVGE-NIFFSPLTTFYALSMLLLGTRGKSAEQMEKVLHYDSFSGVLKAKTKNSSECSQVGVMHPDFRALISHINQQNSLSVANRIYGTRSISFHKQYVRCCEKLYQAKLQTVDFELSTEETRKSINAWVKNKTNGKITNLFAKGTIDPSSVMVLVSAIYFKGQWQNKFQKRETVKAPFHMGVGKSAVVNMM 212          
BLAST of FC921282 vs. ExPASy Swiss-Prot
Match: AACT_PONAB (Alpha-1-antichymotrypsin OS=Pongo abelii GN=SERPINA3 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.975e-15
Identity = 55/202 (27.23%), Postives = 100/202 (49.50%), Query Frame = 2
Query:   80 SNQTDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLK----SKSDDQLNTFASELVAVVFADGSPSGGPRLSVANGVWIDKSLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREANMWAEKETNGLVKEVLPPGSVDNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMT 673
            S   D A SL K + L +A D N++FSP SI   L+ +S G+   TL ++L+ L+      S+ +++     L+  +      S   +LS+ N +++++ LSL + F +    +Y + +   DFQ  AA   +  N + +  T G + +++    +D+ T ++  N ++FK  W   FD   T    F+L     + VP M+
Sbjct:   51 STNVDFAFSLYKQLVL-KAPDKNVIFSPLSISTALAFLSLGAHNTTLTEILTGLRFNLTETSEAEIHQSFQHLLRTL---NQSSDELQLSMGNAMFVEEQLSLLDRFMEDAKRLYGSEAFATDFQDSAA-AKKLINDYVKNRTRGKITDLIK--DLDSQTMMVLVNYIFFKAKWKMPFDPQDTHQSRFYLSKKKWVMVPMMS 245          
BLAST of FC921282 vs. ExPASy Swiss-Prot
Match: A1AT_PONAB (Alpha-1-antitrypsin OS=Pongo abelii GN=SERPINA1 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.975e-15
Identity = 55/200 (27.50%), Postives = 101/200 (50.50%), Query Frame = 2
Query:   83 NQTDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKSDD----QLNTFASELVAVVFADGSPSGGPRLSVANGVWIDKSLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREANMWAEKETNGLVKEVLPPGSVDNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFM 670
            N  + A SL + +A  ++  +N+ FSP SI    +++S G+K  T  ++L  L     +    Q++    EL+  +     P    +L+  NG+++++SL L + F + V  +Y + +  V+F     E  ++ N + EK T G + +++    +D  T     N ++FKG W   F+   TK+ DFH+    ++KVP M
Sbjct:   53 NLAEFAFSLYRQLA-HQSNSTNIFFSPVSIATAFAMLSLGTKADTHSEILEGLHFNLTEIPEAQVHEGFQELLRTL---NQPDSQLQLTTGNGLFLNESLKLVDKFLEDVKKLYHSDAFTVNFGD-TEEAKKQINDYVEKGTQGKIVDLVK--ELDRDTVFALVNYIFFKGKWERPFEVKDTKEEDFHVDEVTTVKVPMM 245          
BLAST of FC921282 vs. ExPASy Swiss-Prot
Match: A1AT_HUMAN (Alpha-1-antitrypsin OS=Homo sapiens GN=SERPINA1 PE=1 SV=3)

HSP 1 Score: 82.8037 bits (203), Expect = 1.975e-15
Identity = 54/200 (27.00%), Postives = 100/200 (50.00%), Query Frame = 2
Query:   83 NQTDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKSDD----QLNTFASELVAVVFADGSPSGGPRLSVANGVWIDKSLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREANMWAEKETNGLVKEVLPPGSVDNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFM 670
            N  + A SL + +A  ++  +N+ FSP SI    +++S G+K  T D++L  L     +    Q++    EL+  +     P    +L+  NG+++ + L L + F + V  +Y + +  V+F     E  ++ N + EK T G + +++    +D  T     N ++FKG W   F+   T++ DFH+    ++KVP M
Sbjct:   53 NLAEFAFSLYRQLA-HQSNSTNIFFSPVSIATAFAMLSLGTKADTHDEILEGLNFNLTEIPEAQIHEGFQELLRTL---NQPDSQLQLTTGNGLFLSEGLKLVDKFLEDVKKLYHSEAFTVNFGD-TEEAKKQINDYVEKGTQGKIVDLVK--ELDRDTVFALVNYIFFKGKWERPFEVKDTEEEDFHVDQVTTVKVPMM 245          
BLAST of FC921282 vs. ExPASy Swiss-Prot
Match: Y2678_METMA (Uncharacterized serpin-like protein MM_2675 OS=Methanosarcina mazei GN=MM_2675 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.580e-15
Identity = 49/180 (27.22%), Postives = 79/180 (43.89%), Query Frame = 2
Query:  146 NLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKSDDQLNTFASELVAVVFADGSPSGGPRLSVANGVWIDKSLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREANMWAEKETNGLVKEVLPPGSVDNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKKN 685
            N++FSP SI   +++   G++  T +Q+ +     ++  +     E +      GS  G   L  AN +WI +   +K  +   V   Y      +DF  K  +     N W E  T+  +K+++P   +   TR+I  NA+YF G W  TFD   T+   F+  NG    V  M    N
Sbjct:   74 NILFSPYSISAAMAICYEGAENTTKEQISNVFYFPTNKTVLKVRLERINDRINSGS--GDYELQTANALWIQEGYPVKEEYLFNVKKYYDGEVANLDFVRKPDDSRNTINEWVETRTSDKIKDLVPKSMITPDTRIIITNAIYFNGKWAYTFDKQLTEKRAFYPANGEEASVDMMYMYNN 251          
BLAST of FC921282 vs. ExPASy Swiss-Prot
Match: SPB3_HUMAN (Serpin B3 OS=Homo sapiens GN=SERPINB3 PE=1 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 2.580e-15
Identity = 47/183 (25.68%), Postives = 84/183 (45.90%), Query Frame = 2
Query:  131 EAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKSDDQLNTFASELVAVVFADGS----------------PSGGPRLSVANGVWIDKSLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREANMWAEKETNGLVKEVLPPGSVDNSTRLIFANALYFKGAWNETFDSSKTKDYDF 631
            ++K++N+ +SP SI   L ++  G+K  T  Q+   L     DQ+    +   A    D S                 +    L +AN ++ +K+      +   +   Y+ +   VDF     E  ++ N W E +TN  +K ++P G++ ++T L+  NA+YFKG W + F+   TK+  F
Sbjct:   21 KSKENNIFYSPISITSALGMVLLGAKDNTAQQIKKVLHF---DQVTENTTGKAATYHVDRSGNVHHQFQKLLTEFNKSTDAYELKIANKLFGEKTYLFLQEYLDAIKKFYQTSVESVDFANAPEESRKKINSWVESQTNEKIKNLIPEGNIGSNTTLVLVNAIYFKGQWEKKFNKEDTKEEKF 200          
BLAST of FC921282 vs. ExPASy Swiss-Prot
Match: SPB7_HUMAN (Serpin B7 OS=Homo sapiens GN=SERPINB7 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.369e-15
Identity = 46/171 (26.90%), Postives = 79/171 (46.20%), Query Frame = 2
Query:  140 DSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLK-------SKSDDQLNTFASELVAVVFADGSPSGGPRLSVANGVWIDKSLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREANMWAEKETNGLVKEVLPPGSVDNSTRLIFANALYFKGAWNETFDSSKTKDYDF 631
            + N+ FS  S+   L+L+  G++  +L Q+   L          S +  +   S+L  V     +      LS+ NG++ +K       + +  + +Y A   +VDF     +  R  N W E ET+G +K V+  G + +S  ++  NA+YFKG W   F  S+T +  F
Sbjct:   25 NGNVFFSSLSLFAALALVRLGAQDDSLSQIDKLLHVNTASGYGNSSNSQSGLQSQLKRVFSDINASHKDYDLSIVNGLFAEKVYGFHKDYIECAEKLYDAKVERVDFTNHLEDTRRNINKWVENETHGKIKNVIGEGGISSSAVMVLVNAVYFKGKWQSAFTKSETINCHF 195          
The following BLAST results are available for this feature:
BLAST of FC921282 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 184
Match NameE-valueIdentityDescription
SPB10_RAT1.158e-1525.11Serpin B10 OS=Rattus norvegicus GN=Serpinb10 PE=2 ... [more]
CBG_SAISC1.158e-1527.86Corticosteroid-binding globulin OS=Saimiri sciureu... [more]
ILEU_HUMAN1.512e-1527.36Leukocyte elastase inhibitor OS=Homo sapiens GN=SE... [more]
SPB11_MOUSE1.975e-1525.85Serpin B11 OS=Mus musculus GN=Serpinb11 PE=2 SV=1[more]
AACT_PONAB1.975e-1527.23Alpha-1-antichymotrypsin OS=Pongo abelii GN=SERPIN... [more]
A1AT_PONAB1.975e-1527.50Alpha-1-antitrypsin OS=Pongo abelii GN=SERPINA1 PE... [more]
A1AT_HUMAN1.975e-1527.00Alpha-1-antitrypsin OS=Homo sapiens GN=SERPINA1 PE... [more]
Y2678_METMA2.580e-1527.22Uncharacterized serpin-like protein MM_2675 OS=Met... [more]
SPB3_HUMAN2.580e-1525.68Serpin B3 OS=Homo sapiens GN=SERPINB3 PE=1 SV=2[more]
SPB7_HUMAN3.369e-1526.90Serpin B7 OS=Homo sapiens GN=SERPINB7 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC32103B12EF RVDevelopN Citrus clementina cDNA clone C32103B12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921282 ID=FC921282; Name=FC921282; organism=Citrus clementina; type=EST; length=706bp
GATCTAAAACTTGTCAGTCCGTTTCTTCATCGTTTCCAGAGAGAGTAGTT
TGCAGAGCATGGACGTACGCGAATCAATCAGCAACCAAACCGACGTCGCT
TTGTCTCTAACAAAGCACGTTGCCCTAACCGAAGCTAAAGACTCGAACCT
CGTCTTCTCGCCGTCATCGATCCACGTTCTGCTGAGCCTGATCTCGGCTG
GATCCAAGGGCCCCACTCTCGACCAGTTGCTCTCTTTTCTCAAGTCCAAA
TCCGACGACCAACTTAACACCTTCGCCTCCGAACTCGTCGCCGTCGTTTT
TGCCGACGGAAGTCCTAGCGGCGGGCCCCGCTTGTCCGTGGCCAATGGTG
TTTGGATTGATAAGTCACTTTCTCTCAAGAATACTTTCAAACAGGTTGTG
GACAACGTCTACAAGGCTGCTTCTAATCAAGTCGATTTCCAAACCAAGGC
TGCTGAAGTATCCAGAGAAGCGAACATGTGGGCTGAGAAGGAGACCAATG
GCCTTGTTAAAGAGGTTCTTCCTCCTGGTTCAGTTGACAATTCAACCAGG
CTCATCTTTGCAAATGCACTATACTTCAAAGGAGCTTGGAATGAAACATT
TGATTCATCAAAGACAAAAGACTATGACTTTCACCTTCTCAATGGAGGCT
CCATTAAAGTGCCGTTCATGACTAGCAAGAAGAATCAGTTTGTGAGTGCC
TTTGAT
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