FC921282

Overview
NameFC921282
Unique NameFC921282
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length706
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921282 vs. ExPASy Swiss-Prot
Match: SPZ6C_ORYSJ (Putative serpin-Z6C OS=Oryza sativa subsp. japonica GN=Os11g0231200 PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.100e-33
Identity = 78/227 (34.36%), Postives = 128/227 (56.39%), Query Frame = 2
Query:   50 LQSMDVRESISNQTDVALSLTKHVALTEAKDS----NLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKSDDQLNTFASELVAVVFADGS----PSGGPRLSVANGVWIDKSLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREANMWAEKETNGLVKEVLPPGSVDNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKKNQFVSAFD 706
            ++S   R ++S  T +++ LTK ++   A  +    NLVFSP SI+ +LS+++AG++G TL +LL  L ++S ++L   A E+   + A G     P GGPR++ A GVW +++ +++  F+      + AA+  VDF     E  +E N W    T  L+  +LPPGSV   T L+  +A+YF G W   F    T+   FH L+GG ++  FM S ++Q+++  D
Sbjct:    1 MESCARRCAVSGLTALSMRLTKQLSAAAASKAGAAGNLVFSPLSIYSVLSVVTAGARGRTLTELLGALGAESREKLAANAGEMARALPAPGGGAAQPGGGPRVAHACGVWHERTRTVRPAFRDAAAASFNAAALAVDFLNNPEEARKEINSWVAAATENLIDTILPPGSVSTDTGLVVTSAIYFNGQWWTPFCKEITEKRAFHRLDGGDVEADFMRSGEDQYIAVHD 227          
BLAST of FC921282 vs. ExPASy Swiss-Prot
Match: SPZ5_ORYSJ (Putative serpin-Z5 OS=Oryza sativa subsp. japonica GN=Os11g0232000 PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.100e-33
Identity = 74/194 (38.14%), Postives = 110/194 (56.70%), Query Frame = 2
Query:   89 TDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKSDDQLNTFASELVAVVFADGSPSGGPRLSVANGVWIDKSLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREANMWAEKETNGLVKEVLPPGSVDNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFM 670
            T++AL + + +    A D NLVFSP S++  L+L++AG+ G TL +LL  L + S D+L   A  L     AD S +GGPR+S  +GVW DK+ +L  +F+      + A +   DF+ K  E   + N WA K TN L+  V+  G +   T ++ ANA+YFKG W + F  + TK   FH L+G ++   FM
Sbjct:   15 TELALRVARRIQAGGAPDGNLVFSPLSVYAALALVAAGAGGDTLAELLGVLGAGSRDELAGLAGRLAGRALADRSRAGGPRVSFVSGVWYDKTRTLSPSFRDAAVQSFMAETRAADFREKPGEAVNQINAWARKATNKLIDTVI-DGGLPADTDVVVANAVYFKGKWKDPFTKALTKTGKFHRLDGAAVDASFM 207          
BLAST of FC921282 vs. ExPASy Swiss-Prot
Match: SPZ6A_ORYSJ (Putative serpin-Z6A OS=Oryza sativa subsp. japonica GN=Os11g0230400 PE=3 SV=2)

HSP 1 Score: 142.124 bits (357), Expect = 2.743e-33
Identity = 75/188 (39.89%), Postives = 112/188 (59.57%), Query Frame = 2
Query:  146 NLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKSDDQLNTFASELVAVVFADGSPSGGPRLSVANGVWIDKSLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREANMWAEKETNGLVKEVLPPGSVDNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNG-GSIKVPFMTSKKNQFVSAFD 706
            NLVFSP SI+  LS+++AG++G TL +LL+ L + S D L   A+E +A   A G+ +GGPR++ A G+W +++ SLK  F+      + AA+  VDF     E  +E N W    T  L+  +LPPGSV   T L+  +A+YF G W   F    TK   FHLL+G G++   FM + ++Q+++A D
Sbjct:   23 NLVFSPLSIYSALSVVTAGARGTTLTELLAALGAPSRDALAKNAAE-IARALAGGTATGGPRVAHACGLWHERTRSLKLAFRDAAAASFNAATRAVDFLANPEEARKEINSWVAAATENLIDTILPPGSVSTDTGLVVTSAIYFNGTWQTPFRKQDTKKDKFHLLDGHGTVDADFMRTGEDQYIAAHD 209          
BLAST of FC921282 vs. ExPASy Swiss-Prot
Match: SPZ6B_ORYSJ (Serpin-Z6B OS=Oryza sativa subsp. japonica GN=Os11g0230700 PE=2 SV=2)

HSP 1 Score: 138.272 bits (347), Expect = 3.961e-32
Identity = 79/209 (37.80%), Postives = 118/209 (56.46%), Query Frame = 2
Query:   95 VALSLTKHVALTEAK--DSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKSD-DQLNTFASELV-AVVFADGSPSGGPRLSVANGVWIDKSLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREANMWAEKETNGLVKEVLPPGSVDNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLL-NGGSIKVPFMTSKKNQFVSAFD 706
            +AL L + ++L E      NLVFSP SI+  L++++AG++G TL +LL+ L + S  D L   A E+V A+    G+ +GGPR++ A G+W D+  ++K  F+      ++A +  VDF     E   E N W    T  L+  +LPPGSV   TRL+ A+A+YF   W   F    TK   FH+L  GG +   FM S  +Q+V+A+D
Sbjct:    1 MALRLAERLSLEEDSVGGGNLVFSPLSIYSALTVVTAGARGTTLAELLAALGAPSSRDALAEDAGEIVRALPGGSGTATGGPRVAHACGLWHDRRRNVKPAFRDAAAASFQATTRAVDFLANPEEARNEINSWVAAATENLIDTILPPGSVSTDTRLVVASAIYFNATWQTPFRKQDTKKDKFHILGGGGDVDADFMRSGDDQYVAAYD 209          
BLAST of FC921282 vs. ExPASy Swiss-Prot
Match: SPZ8_ORYSJ (Putative serpin-Z8 OS=Oryza sativa subsp. japonica GN=Os11g0224800 PE=3 SV=2)

HSP 1 Score: 135.961 bits (341), Expect = 1.966e-31
Identity = 73/193 (37.82%), Postives = 104/193 (53.89%), Query Frame = 2
Query:  146 NLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKSDDQLNTFASELVAVVFADGSPSG-GPRLSVANGVWIDKSLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREANMWAEKETNGLVKEVLPPGSVDNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGS-----IKVPFMTSKKNQFVSAFD 706
            NL FSP S+H  LSL +AG+ G TLD++L+ L + S D L  F         AD  P   GPR+  A GVW D +   K  ++  V   Y A +  VDF+ K  E  ++ N WA + T  L+ +VLPP SV   T ++  NA+YFKG W+  F+ S T+   F+  +G +       VP+M+S+  Q V+  D
Sbjct:   38 NLAFSPLSVHAALSLAAAGAAGGTLDEILAVLGAASRDDLAAFVGRTAETALADRGPESLGPRVVFAPGVWCDAARPFKPAYRAAVAAEYNAEATVVDFKNKVEEARKQINAWARRATGKLITDVLPPRSVGPETAVVLGNAIYFKGKWDRPFNESDTERKPFYRHDGAAAAAAVADVPYMSSRSYQRVAVHD 230          
BLAST of FC921282 vs. ExPASy Swiss-Prot
Match: SPZ9_ORYSJ (Probable non-inhibitory serpin-Z9 OS=Oryza sativa subsp. japonica GN=Os11g0222200 PE=2 SV=2)

HSP 1 Score: 129.028 bits (323), Expect = 2.403e-29
Identity = 71/200 (35.50%), Postives = 108/200 (54.00%), Query Frame = 2
Query:  125 LTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFL------KSKSDDQLNTFASELVAVVFADGSPSGGPRLSVANGVWIDKSLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREANMWAEKETNGLVKEVLPPGSVDNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKKNQFVSAFD 706
            L  A   N   S  ++HV L+L + G++G T  Q+L  L      +  + D  N  AS +V  V  D S SGGPRL+ A GVW D S SL   F  +  NVY +A+ + DF+ K  +   + N W +  T G V  +LP G++D +T L+  +ALYF+G W +  D  +T +  F+ L+G S++VPF+   + +  +  D
Sbjct:   71 LAAAGTGNAAVSAPAVHVSLALAAGGARGATRRQVLQALGCGGGGRGGAADAANV-ASRVVKRVLRDRSTSGGPRLAFAGGVWADASRSLSPEFVGLAGNVYGSAAKKADFKNKPEDAPDQINSWVKDSTKGTVTTLLPAGTIDQNTGLVLGSALYFRGRWLDRDDLRRTTEQKFYCLDGTSVEVPFVEYDRTRLFAVHD 269          
BLAST of FC921282 vs. ExPASy Swiss-Prot
Match: SPZ10_ORYSJ (Putative non-inhibitory serpin-10 OS=Oryza sativa subsp. japonica GN=Os04g0533700 PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 7.731e-28
Identity = 68/195 (34.87%), Postives = 110/195 (56.41%), Query Frame = 2
Query:  122 ALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKSDDQLNTFASELVAVVFADGSPSGGPRLSVANGVWIDKSLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREANMWAEKETNGLVKEVLPPGSVDNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKKNQFVSAFD 706
            A+TE   SN +FSP  +   L+L++ G+ G TL QLL+FL S+   QLN  ++ L+A + A       P+LS A G+++D+SL L+  F+      + A    VDFQ +A   + E N +  + TNG +   + PG+  +ST+ + ANA++FK  W   F+S  T+   FH  +G  + VPF++  +  + + FD
Sbjct:   15 AITE--QSNFMFSPLGLRAGLALLATGTDGETLRQLLAFLGSQHIHQLNAASAGLLAEMRA------WPQLSFAAGIFVDRSLRLRPEFQSTAAAAHGAFPRSVDFQNQANAAAAEVNRFISQATNGRLNNTISPGTFGSSTKCVLANAMHFKATWGRKFESYDTQRRRFHRQDGTRVTVPFLSDPRTHYAARFD 201          
BLAST of FC921282 vs. ExPASy Swiss-Prot
Match: SPZ12_ORYSJ (Putative serpin-Z12 OS=Oryza sativa subsp. japonica GN=Os01g0267300 PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.249e-27
Identity = 67/179 (37.43%), Postives = 101/179 (56.42%), Query Frame = 2
Query:  146 NLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKSDDQLNTF-ASELVAVVFADGSPSGGPRLSVANGVWIDKSLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREANMWAEKETNGLVKEVLPPGSVDNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSK 679
            N + SP S H  L+L++ G++G T  +LL FL S S  +L+    + LVA +         P  S A GVW+D+  +L   F     + Y A +   DF T+  +     N +    T GL+++VLPP SVD+ST ++ ANA++FKG W+  F  S T    FHLL+GG+++ PFMT++
Sbjct:   60 NFIVSPLSFHAALALVADGARGETQRELLGFLGSPSLAELHRSPTTRLVARL------RHLPNTSFACGVWVDRGRALTPEFADAAASRYAAVAEPADFATQPEQARERVNAFVSDATEGLIRDVLPPNSVDSSTVVVLANAVHFKGTWSLPFHPSATFHAPFHLLDGGAVRAPFMTTE 232          
BLAST of FC921282 vs. ExPASy Swiss-Prot
Match: Y1782_PYRKO (Uncharacterized serpin-like protein TK1782 OS=Pyrococcus kodakaraensis GN=TK1782 PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.845e-22
Identity = 58/178 (32.58%), Postives = 94/178 (52.81%), Query Frame = 2
Query:  140 DSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKSDDQLNTFASELVAVVFADGSPSGGPR-LSVANGVWIDKSLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREANMWAEKETNGLVKEVLPPGSVDNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFM 670
            ++N+ FSP SI   L++   G++G T +++   L    DD         + +     SP G P  L   N +W+ +  SL+  +  +V   Y   + +VDFQ   AE +RE N W E++TNG +K+++    +   TRL+  NA+YFK  W+  F +S T++  FH  N G++ VP M
Sbjct:   78 NNNVFFSPFSIETALAMAYEGARGKTAEEMKRVLHLPEDDDARWTGFRYLLLSLK--SPEGSPFILRSVNALWVQRGYSLREEYLGIVKEFYLGEAKEVDFQGNPAEAAREINEWVEEQTNGRIKDIV--SGLSPLTRLVITNAVYFKANWSSRFRASDTRNETFHAPN-GTVIVPMM 250          
BLAST of FC921282 vs. ExPASy Swiss-Prot
Match: SPI_CYACP (Serine protease inhibitor OS=Cyanea capillata PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.081e-21
Identity = 54/177 (30.51%), Postives = 93/177 (52.54%), Query Frame = 2
Query:  140 DSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKSDDQLNTFASELVAVVFADGSPSGGPRLSVANGVWIDKSLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREANMWAEKETNGLVKEVLPPGSVDNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFM 670
            + N+V SP SI   L+L++AGS+G TL ++   L  + D      A    A   A    +  P +  AN VW+D    + ++++ ++ + +     + DF+  +++ + + N W E  TN  +++  PPG +  +T+ +  NALYFKG W E FD   T+D  FH+ N   ++V  M
Sbjct:   26 EKNVVCSPLSISSALALVAAGSRGKTLKEIADALNWREDADGLAKALLAEAEKAAQNCDASCP-VKTANNVWVDNEFKILDSYRDLLKS-FAVNVGKADFKKHSSDETIKINSWIEDHTNKKIRDFFPPGELSEATKAVLVNALYFKGKWAEPFDMESTRDDTFHVSNSKEVQVKMM 200          
The following BLAST results are available for this feature:
BLAST of FC921282 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 184
Match NameE-valueIdentityDescription
SPZ6C_ORYSJ2.100e-3334.36Putative serpin-Z6C OS=Oryza sativa subsp. japonic... [more]
SPZ5_ORYSJ2.100e-3338.14Putative serpin-Z5 OS=Oryza sativa subsp. japonica... [more]
SPZ6A_ORYSJ2.743e-3339.89Putative serpin-Z6A OS=Oryza sativa subsp. japonic... [more]
SPZ6B_ORYSJ3.961e-3237.80Serpin-Z6B OS=Oryza sativa subsp. japonica GN=Os11... [more]
SPZ8_ORYSJ1.966e-3137.82Putative serpin-Z8 OS=Oryza sativa subsp. japonica... [more]
SPZ9_ORYSJ2.403e-2935.50Probable non-inhibitory serpin-Z9 OS=Oryza sativa ... [more]
SPZ10_ORYSJ7.731e-2834.87Putative non-inhibitory serpin-10 OS=Oryza sativa ... [more]
SPZ12_ORYSJ2.249e-2737.43Putative serpin-Z12 OS=Oryza sativa subsp. japonic... [more]
Y1782_PYRKO2.845e-2232.58Uncharacterized serpin-like protein TK1782 OS=Pyro... [more]
SPI_CYACP1.081e-2130.51Serine protease inhibitor OS=Cyanea capillata PE=1... [more]

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Properties
Property NameValue
Genbank descriptionC32103B12EF RVDevelopN Citrus clementina cDNA clone C32103B12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921282 ID=FC921282; Name=FC921282; organism=Citrus clementina; type=EST; length=706bp
GATCTAAAACTTGTCAGTCCGTTTCTTCATCGTTTCCAGAGAGAGTAGTT
TGCAGAGCATGGACGTACGCGAATCAATCAGCAACCAAACCGACGTCGCT
TTGTCTCTAACAAAGCACGTTGCCCTAACCGAAGCTAAAGACTCGAACCT
CGTCTTCTCGCCGTCATCGATCCACGTTCTGCTGAGCCTGATCTCGGCTG
GATCCAAGGGCCCCACTCTCGACCAGTTGCTCTCTTTTCTCAAGTCCAAA
TCCGACGACCAACTTAACACCTTCGCCTCCGAACTCGTCGCCGTCGTTTT
TGCCGACGGAAGTCCTAGCGGCGGGCCCCGCTTGTCCGTGGCCAATGGTG
TTTGGATTGATAAGTCACTTTCTCTCAAGAATACTTTCAAACAGGTTGTG
GACAACGTCTACAAGGCTGCTTCTAATCAAGTCGATTTCCAAACCAAGGC
TGCTGAAGTATCCAGAGAAGCGAACATGTGGGCTGAGAAGGAGACCAATG
GCCTTGTTAAAGAGGTTCTTCCTCCTGGTTCAGTTGACAATTCAACCAGG
CTCATCTTTGCAAATGCACTATACTTCAAAGGAGCTTGGAATGAAACATT
TGATTCATCAAAGACAAAAGACTATGACTTTCACCTTCTCAATGGAGGCT
CCATTAAAGTGCCGTTCATGACTAGCAAGAAGAATCAGTTTGTGAGTGCC
TTTGAT
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