FC921282

Overview
NameFC921282
Unique NameFC921282
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length706
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921282 vs. ExPASy Swiss-Prot
Match: ILEU_HORSE (Leukocyte elastase inhibitor OS=Equus caballus GN=SERPINB1 PE=1 SV=3)

HSP 1 Score: 93.2041 bits (230), Expect = 1.461e-18
Identity = 60/188 (31.91%), Postives = 93/188 (49.47%), Query Frame = 2
Query:  122 ALTEAKDS-NLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKSDDQLNTFASELVAVVFADGSPSGGPRLSVANGVWIDKSLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREANMWAEKETNGLVKEVLPPGSVDNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKK 682
            AL E+  + N+  SP SI   L++I  G++G T  Q+   L   + + +++    L A +   G+P     L +AN ++ +K+ +    F      +Y A    VDFQ    +  +E N W + +T G + E+L  G VDN T+L+  NA+YFKG W E F    T+D  F L    +  V  M  KK
Sbjct:   18 ALNESDPTGNIFISPLSISSALAMIFLGTRGNTAAQVSKALYFDTVEDIHSRFQSLNADINKPGAPY---ILKLANRLYGEKTYNFLADFLASTQKMYGAELASVDFQQAPEDARKEINEWVKGQTEGKIPELLVKGMVDNMTKLVLVNAIYFKGNWQEKFMKEATRDAPFRLNKKDTKTVKMMYQKK 202          
BLAST of FC921282 vs. ExPASy Swiss-Prot
Match: ANT3_BOVIN (Antithrombin-III OS=Bos taurus GN=SERPINC1 PE=1 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 1.461e-18
Identity = 54/196 (27.55%), Postives = 96/196 (48.98%), Query Frame = 2
Query:   98 ALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLK-----SKSDDQLNTFASELVAVVFADGSPSGGPRLSVANGVWIDKSLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREANMWAEKETNGLVKEVLPPGSVDNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFM 670
            A +  +H+A ++  + N+  SP SI    ++   G+   TL QL+   K      K+ DQ++ F ++L   ++   + S    L  AN ++  KS++   T++ + + VY A    +DF+  A +     N W   +T G + +V+PP +++  T L+  N +YFKG W   F    T+   F+  +G S  V  M
Sbjct:   92 ATAFYQHLADSKNNNDNIFLSPLSISTAFAMTKLGACNNTLKQLMEVFKFDTISEKTSDQIHFFFAKLNCRLYRKANKSS--ELVSANRLFGGKSITFNETYQDISEVVYGAKLQPLDFKGNAEQSRLTINQWISNKTEGRITDVIPPQAINEFTVLVLVNTIYFKGLWKSKFSPENTRKELFYKADGESCSVLMM 285          
BLAST of FC921282 vs. ExPASy Swiss-Prot
Match: A1AT4_MOUSE (Alpha-1-antitrypsin 1-4 OS=Mus musculus GN=Serpina1d PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.461e-18
Identity = 64/211 (30.33%), Postives = 104/211 (49.29%), Query Frame = 2
Query:   53 QSMDVRESISNQTDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLK----SKSDDQLNTFASELVAVVFADGSPSGGPRLSVANGVWIDKSLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREANMWAEKETNGLVKEVLPPGSVDNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMT 673
            QS    E  +N  D AL L + + + ++  SN+ FSP SI    +++S GSKG T  Q+L  L+      S+  ++     L+  +     P    +LS  NG++++  L L   F +   N Y+A    V+F  ++ E  +  N + EK T G + E +    +D  T    AN + FKG W + FD   T++ +FH+    ++KVP MT
Sbjct:   37 QSPASHEIATNLGDFALRLYREL-VHQSNTSNIFFSPVSIATAFAMLSLGSKGDTHTQILEGLQFNLTQTSEADIHKSFQHLLQTL---NRPDSELQLSTGNGLFVNNDLKLVEKFLEEAKNHYQAEVFSVNF-AESEEAKKVINDFVEKGTQGKIVEAVK--KLDQDTVFALANYILFKGKWKQPFDPENTEEAEFHVDESTTVKVPMMT 240          
BLAST of FC921282 vs. ExPASy Swiss-Prot
Match: ACH2_BOMMO (Antichymotrypsin-2 OS=Bombyx mori PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.493e-18
Identity = 56/176 (31.82%), Postives = 91/176 (51.70%), Query Frame = 2
Query:  146 NLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKSDDQLNT-FASELVAVVFADGSPSGGPRLSVANGVWIDKSLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREANMWAEKETNGLVKEVLPPGSVDNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFM 670
            ++V S  S+   L+ ++  S G T ++LL  +    DD + T FAS+       D     G  L +AN V++     L   F  V  +V+ +    +DF +K    ++  N W E+ TN  +K+++ P S+ ++T  +  NA+YFKGAW+  FD   T D DF++    +IKVP M
Sbjct:   32 SIVLSAFSVLPPLAQLALASDGETHEELLKAIGFPDDDAIRTEFASKS-----RDLRSIKGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDF-SKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMM 201          
BLAST of FC921282 vs. ExPASy Swiss-Prot
Match: A1AT_BOMMO (Antitrypsin OS=Bombyx mori PE=1 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 2.493e-18
Identity = 56/176 (31.82%), Postives = 91/176 (51.70%), Query Frame = 2
Query:  146 NLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKSDDQLNT-FASELVAVVFADGSPSGGPRLSVANGVWIDKSLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREANMWAEKETNGLVKEVLPPGSVDNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFM 670
            ++V S  S+   L+ ++  S G T ++LL  +    DD + T FAS+       D     G  L +AN V++     L   F  V  +V+ +    +DF +K    ++  N W E+ TN  +K+++ P S+ ++T  +  NA+YFKGAW+  FD   T D DF++    +IKVP M
Sbjct:   48 SIVLSAFSVLPPLAQLALASDGETHEELLKAIGFPDDDAIRTEFASKS-----RDLRSIKGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDF-SKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMM 217          
BLAST of FC921282 vs. ExPASy Swiss-Prot
Match: A1AT2_HORSE (Alpha-1-antiproteinase 2 OS=Equus caballus PE=1 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 2.493e-18
Identity = 66/215 (30.70%), Postives = 112/215 (52.09%), Query Frame = 2
Query:   41 ESSLQSMDVRESISNQTDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLL---SF-LKSKSDDQLNT-FASELVAVVFADGSPSGGPRLSVANGVWIDKSLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREANMWAEKETNGLVKEVLPPGSVDNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFM 670
            E  LQ     +   N  D A SL +HVA  ++  +N+ FSP SI    +L+S G+KG T  Q+L   SF L   ++ Q++  F   L A+  +D       +L+  NG++ID+S  L + F + V  +Y + +  ++F+    E  ++ N + EK T G + +++    +D  T L   N ++FKG W + F+   T + DFH+    +++VP M
Sbjct:   42 EEHLQEPAEHKIAPNLADFAFSLYRHVA-HQSNTTNIFFSPVSIATAFALLSLGAKGDTHTQILEGLSFNLTELAEAQIHDGFQHLLNALNHSDNQL----QLTTGNGLFIDESAKLLDKFLEDVKKLYHSEAFSINFRD-TEEAKKQINDYVEKGTQGKIVDLVK--DLDKDTVLALVNYIFFKGTWEKPFEPEYTTEQDFHVDEKTTVRVPMM 248          
BLAST of FC921282 vs. ExPASy Swiss-Prot
Match: PAI1_PIG (Plasminogen activator inhibitor 1 OS=Sus scrofa GN=SERPINE1 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.256e-18
Identity = 65/235 (27.66%), Postives = 113/235 (48.09%), Query Frame = 2
Query:   11 LSVRFFIVSRESSLQSMDVRESISNQTDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKSDDQ-----LNTFASELVAVVFADGSPSGGPRLSVANGVWIDKSLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREA---NMWAEKETNGLVKEVLPPGSVDNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKKNQF 691
            L++ F   S  S  QS+  R +    TD  + + + V +  +KD N+VFSP  +  +L+++   + G T  Q+   ++ K +++     L     EL+        P     +S A+ +++ + L L   F      +++    QVDF    +E+ R     N W ++ T G++ ++L  G+VD  TRL+  NALYF G W   F    T    FH  +G ++ VP M ++ N+F
Sbjct:   14 LALTFAEGSASSHHQSLAARLA----TDFGVKVFRQV-VQASKDRNVVFSPYGVASVLAMLQLTTAGDTQQQIQEAMQFKIEEKGMAPALRQLYKELMG-------PWNKDEISTADAIFVQRDLKLVQGFMPYFFRLFRTTVKQVDF----SEMDRARFIINDWVKRHTKGMINDLLGQGAVDQLTRLVLVNALYFNGQWKTPFPEKSTHHRLFHKSDGSTVSVPMM-AQTNKF 231          
BLAST of FC921282 vs. ExPASy Swiss-Prot
Match: OVALY_CHICK (Ovalbumin-related protein Y OS=Gallus gallus GN=SERPINB14B PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.256e-18
Identity = 55/190 (28.95%), Postives = 94/190 (49.47%), Query Frame = 2
Query:  140 DSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLK--------SKSDDQLNTFASELVAVVFAD-----GSPSGGPRLSVANGVWIDKSLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREANMWAEKETNGLVKEVLPPGSVDNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFM 670
            + N+++ P SI   L+++  G++G T  Q+   L         S +D Q  +  SE V  +F +       P+    L +A+ +++DK+ S+   +       Y     +V+F+T A E  +  N W EKETNG +K++L   S+D  T ++F N +YFKG W   F++  T++  F +    S  V  M
Sbjct:   25 NENILYCPLSILTALAMVYLGARGNTESQMKKVLHFDSITGAGSTTDSQCGS--SEYVHNLFKELLSEITRPNATYSLEIADKLYVDKTFSVLPEYLSCARKFYTGGVEEVNFKTAAEEARQLINSWVEKETNGQIKDLLVSSSIDFGTTMVFINTIYFKGIWKIAFNTEDTREMPFSMTKEESKPVQMM 212          
BLAST of FC921282 vs. ExPASy Swiss-Prot
Match: A1AT2_MOUSE (Alpha-1-antitrypsin 1-2 OS=Mus musculus GN=Serpina1b PE=1 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 3.256e-18
Identity = 63/210 (30.00%), Postives = 104/210 (49.52%), Query Frame = 2
Query:   53 QSMDVRESISNQTDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLK----SKSDDQLNTFASELVAVVFADGSPSGGPRLSVANGVWIDKSLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREANMWAEKETNGLVKEVLPPGSVDNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFM 670
            QS    E  +N  D A+SL + + + ++  SN+ FSP SI    +++S GSKG T  Q+L  L+      S+  ++     L+  +     P    +LS  NG++++  L L   F +   N Y+A    V+F  ++ E  +  N + EK T G + E +    +D  T    AN + FKG W + FD   T++ +FH+    ++KVP M
Sbjct:   37 QSPASHEIATNLGDFAISLYREL-VHQSNTSNIFFSPVSIATAFAMLSLGSKGDTHTQILEGLQFNLTQTSEADIHKSFQHLLQTL---NRPDSELQLSTGNGLFVNNDLKLVEKFLEEAKNHYQAEVFSVNF-AESEEAKKVINDFVEKGTQGKIVEAVK--ELDQDTVFALANYILFKGKWKKPFDPENTEEAEFHVDKSTTVKVPMM 239          
BLAST of FC921282 vs. ExPASy Swiss-Prot
Match: SPB10_PAPAN (Serpin B10 OS=Papio anubis GN=SERPINB10 PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.252e-18
Identity = 65/227 (28.63%), Postives = 105/227 (46.26%), Query Frame = 2
Query:   59 MDVRESISNQTDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKSDD--------------QLNTFASELV-----AVVFADGSPSGGPRLSVANGVWIDKSLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREANMWAEKETNGLVKEVLPPGSVDNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKK 682
            MD   +  NQ   AL L+K +A   A+  N+ FS  SI   L+++  G+KG T  Q+   L+   D               + N+  SE +      ++     P+    L  AN ++ +K+    N + + +   + A    V+F   + ++ +E N W E++T G ++ +LP  SVD++TR+I  NALYFKG W   F    T +  F +    S  V  M  KK
Sbjct:    1 MDTLATSINQ--FALELSKKLA-ESAQGKNIFFSSWSISTSLAMVYLGTKGTTAAQMGQVLQFNRDQGVKSSPESEKKRKMEFNSSNSEEIHSDFHTLISEILKPNDDYLLKTANAIYGEKTYPFHNKYLEDMKTYFGAEPQSVNFVEASDQIRKEINSWVERQTEGKIQNLLPDDSVDSTTRMILVNALYFKGIWEHQFLVQNTTEKPFRINETTSKPVQMMFMKK 224          
The following BLAST results are available for this feature:
BLAST of FC921282 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 184
Match NameE-valueIdentityDescription
ILEU_HORSE1.461e-1831.91Leukocyte elastase inhibitor OS=Equus caballus GN=... [more]
ANT3_BOVIN1.461e-1827.55Antithrombin-III OS=Bos taurus GN=SERPINC1 PE=1 SV... [more]
A1AT4_MOUSE1.461e-1830.33Alpha-1-antitrypsin 1-4 OS=Mus musculus GN=Serpina... [more]
ACH2_BOMMO2.493e-1831.82Antichymotrypsin-2 OS=Bombyx mori PE=1 SV=1[more]
A1AT_BOMMO2.493e-1831.82Antitrypsin OS=Bombyx mori PE=1 SV=2[more]
A1AT2_HORSE2.493e-1830.70Alpha-1-antiproteinase 2 OS=Equus caballus PE=1 SV... [more]
PAI1_PIG3.256e-1827.66Plasminogen activator inhibitor 1 OS=Sus scrofa GN... [more]
OVALY_CHICK3.256e-1828.95Ovalbumin-related protein Y OS=Gallus gallus GN=SE... [more]
A1AT2_MOUSE3.256e-1830.00Alpha-1-antitrypsin 1-2 OS=Mus musculus GN=Serpina... [more]
SPB10_PAPAN4.252e-1828.63Serpin B10 OS=Papio anubis GN=SERPINB10 PE=3 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC32103B12EF RVDevelopN Citrus clementina cDNA clone C32103B12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921282 ID=FC921282; Name=FC921282; organism=Citrus clementina; type=EST; length=706bp
GATCTAAAACTTGTCAGTCCGTTTCTTCATCGTTTCCAGAGAGAGTAGTT
TGCAGAGCATGGACGTACGCGAATCAATCAGCAACCAAACCGACGTCGCT
TTGTCTCTAACAAAGCACGTTGCCCTAACCGAAGCTAAAGACTCGAACCT
CGTCTTCTCGCCGTCATCGATCCACGTTCTGCTGAGCCTGATCTCGGCTG
GATCCAAGGGCCCCACTCTCGACCAGTTGCTCTCTTTTCTCAAGTCCAAA
TCCGACGACCAACTTAACACCTTCGCCTCCGAACTCGTCGCCGTCGTTTT
TGCCGACGGAAGTCCTAGCGGCGGGCCCCGCTTGTCCGTGGCCAATGGTG
TTTGGATTGATAAGTCACTTTCTCTCAAGAATACTTTCAAACAGGTTGTG
GACAACGTCTACAAGGCTGCTTCTAATCAAGTCGATTTCCAAACCAAGGC
TGCTGAAGTATCCAGAGAAGCGAACATGTGGGCTGAGAAGGAGACCAATG
GCCTTGTTAAAGAGGTTCTTCCTCCTGGTTCAGTTGACAATTCAACCAGG
CTCATCTTTGCAAATGCACTATACTTCAAAGGAGCTTGGAATGAAACATT
TGATTCATCAAAGACAAAAGACTATGACTTTCACCTTCTCAATGGAGGCT
CCATTAAAGTGCCGTTCATGACTAGCAAGAAGAATCAGTTTGTGAGTGCC
TTTGAT
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