FC921282

Overview
NameFC921282
Unique NameFC921282
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length706
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921282 vs. ExPASy Swiss-Prot
Match: SPI2_HUMAN (Serpin I2 OS=Homo sapiens GN=SERPINI2 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.701e-17
Identity = 59/205 (28.78%), Postives = 103/205 (50.24%), Query Frame = 2
Query:   68 RESISNQTDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKSDDQLNTFASELVAVVFADGSPSGGPR----LSVANGVWIDKSLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREANMWAEKETNGLVKEVLPPGSVDNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFM 670
            R S    T+ A+ L + V+L+  KD N++FSP  I ++L ++  G+KG    Q+   LK     Q  T A E   V+ +  S     +     ++AN +++ +  ++K  +       +++A   VDFQ   A  +   + W E++T+G +K++         TRL+  NA+YFKG W + F    T+  +F   NG ++K+P M
Sbjct:   20 RCSAQKNTEFAVDLYQEVSLSH-KD-NIIFSPLGITLVLEMVQLGAKGKAQQQIRQTLK-----QQETSAGEEFFVLKSFFSAISEKKQEFTFNLANALYLQEGFTVKEQYLHGNKEFFQSAIKLVDFQDAKA-CAEMISTWVERKTDGKIKDMFSGEEFGPLTRLVLVNAIYFKGDWKQKFRKEDTQLINFTKKNGSTVKIPMM 216          
BLAST of FC921282 vs. ExPASy Swiss-Prot
Match: SPB10_MOUSE (Serpin B10 OS=Mus musculus GN=Serpinb10 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.701e-17
Identity = 55/215 (25.58%), Postives = 93/215 (43.26%), Query Frame = 2
Query:   98 ALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKSDDQLNT-------------------FASELVAVVFADGSPSGGPRLSVANGVWIDKSLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREANMWAEKETNGLVKEVLPPGSVDNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKKN 685
            AL  +K +A   A+  N+ FSP  I   L+++  G+KG T DQ+   L+  S +   +                     S+   +      P     L  AN ++ +K+    N + + +   + A    V+F   + ++ +E N W   +T G +  +LP  SVD  T+++  NALYFKG W   F    T +  F +    S  V  M+ K++
Sbjct:   12 ALEFSKKLA-ESAEGRNIFFSPWGISTALAMLYLGTKGTTADQMAQVLQFSSVEDFKSCPDSEKKRKMEFNSGKFEEIQSDFQTLAAEILKPGNSYVLKTANRIYGEKTYPFHNKYLEDMKTYFGAEPQSVNFVEASGQIRKEINSWVGSQTGGKIPNLLPDDSVDTKTKMVLVNALYFKGTWEHQFSVKNTTERPFRVNKTTSKPVQMMSMKQS 225          
BLAST of FC921282 vs. ExPASy Swiss-Prot
Match: PAI1_RAT (Plasminogen activator inhibitor 1 OS=Rattus norvegicus GN=Serpine1 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.701e-17
Identity = 64/209 (30.62%), Postives = 105/209 (50.24%), Query Frame = 2
Query:   89 TDVALSLTKHVALTEAKDSNLVFSP---SSIHVLLSLISAGSKGPTLDQLLSFLKSK--SDDQLNTFASELVAVVFADGSPSGGPRLSVANGVWIDKSLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREA---NMWAEKETNGLVKEVLPPGSVDNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKKNQF 691
            T+  + + +HV +  +KD N+VFSP   SS+  +L L +AG     +   + F  S+  +   L   + EL+      GS +    +S A+ +++ + L L   F      +++    QVDF    +EV R     N W E+ T G++ ++L  G+V+  TRL+  NALYF G W   F  + T    FH  +G +I VP M ++ N+F
Sbjct:   36 TNFGVKVFQHV-VQASKDRNVVFSPYGVSSVLAMLQLTTAGKTRQQIQDAMGFNISERGTAPALRKLSKELM------GSWNKN-EISTADAIFVQRDLELVQGFMPHFFKLFRTTVKQVDF----SEVERARFIINDWVERHTKGMISDLLAKGAVNELTRLVLVNALYFNGQWKTPFLEASTHQRLFHKSDGSTISVPMM-AQNNKF 231          
BLAST of FC921282 vs. ExPASy Swiss-Prot
Match: ILEU_PIG (Leukocyte elastase inhibitor OS=Sus scrofa GN=SERPINB1 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.701e-17
Identity = 63/199 (31.66%), Postives = 97/199 (48.74%), Query Frame = 2
Query:   89 TDVALSLTKHVALTEAKDS-NLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKSDDQLNTFASELVAVVFADGSPSGGPRLSVANGVWIDKSLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREANMWAEKETNGLVKEVLPPGSVDNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKK 682
            T  AL L +  AL E+  + N+  SP SI   L++I  G++G T  Q+   L   +   +++    L A +   G+      L +AN ++ +K+      F       Y A    VDF   + E  +  N W +++T G + E+L  G VD++T+L+  NA+YFKG+W E F +  TKD  F L    S  V  M  KK
Sbjct:    9 TRFALDLFR--ALNESNPAGNIFISPFSISSALAMILLGTRGNTEAQMSKALHFDTVKDIHSRFQSLNADINKCGASY---ILKLANRLFGEKTYHFLPEFLASTQKTYGAELASVDFLRASEEARKAINEWVKEQTEGKIPELLASGVVDSATKLVLVNAIYFKGSWQEKFMTEATKDAPFRLNKKDSKTVKMMYQKK 202          
BLAST of FC921282 vs. ExPASy Swiss-Prot
Match: SPA3L_RAT (Serine protease inhibitor A3L OS=Rattus norvegicus GN=Serpina3l PE=1 SV=3)

HSP 1 Score: 87.8113 bits (216), Expect = 6.140e-17
Identity = 58/205 (28.29%), Postives = 107/205 (52.20%), Query Frame = 2
Query:   80 SNQTDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSK----SDDQLNTFASELVAVVFADGSPSGGPRLSVANGVWIDKSLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREANMWAEKETNGLVKEVLPPGSVDNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKK 682
            S+ TD ALSL K +AL    D N+VFSP SI   L+++S G+K  T++++L  LK      ++++++     L+  +     P     ++  + ++IDK   + + F++    +Y+A +   DF+ +  E  +  N +   +T G + E+     ++  T ++  N L FKG W   F+ + T + +F+L    S+KVP M  K+
Sbjct:   47 SSNTDFALSLYKKLALRNP-DKNVVFSPLSISAALTILSLGAKDSTMEEILEGLKFNLTEITEEEIHQGFGHLLQRL---SQPEDQVEINTGSALFIDKEQPILSEFQEKTRALYQAEAFIADFK-QPNEAKKLINDYVSNQTQGKIAELF--SDLEERTSMVLVNYLLFKGKWKVPFNPNDTFESEFYLDEKRSVKVPMMKIKE 244          
BLAST of FC921282 vs. ExPASy Swiss-Prot
Match: SPA3K_RAT (Serine protease inhibitor A3K OS=Rattus norvegicus GN=Serpina3k PE=1 SV=3)

HSP 1 Score: 87.8113 bits (216), Expect = 6.140e-17
Identity = 58/204 (28.43%), Postives = 104/204 (50.98%), Query Frame = 2
Query:   80 SNQTDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSK----SDDQLNTFASELVAVVFADGSPSGGPRLSVANGVWIDKSLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREANMWAEKETNGLVKEVLPPGSVDNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSK 679
            S  TD  LSL K +AL    D N+VFSP SI   L+++S G+K  T++++L  LK      ++++++     L+  +     P     ++  + ++IDK   + + F++    +Y+A +   DF+ +  E  +  N +   +T G + E+     +D  T ++  N L FKG W   F+ + T + +F+L    S+KVP M  K
Sbjct:   47 SINTDFTLSLYKKLALRNP-DKNVVFSPLSISAALAILSLGAKDSTMEEILEVLKFNLTEITEEEIHQGFGHLLQRL---SQPEDQAEINTGSALFIDKEQPILSEFQEKTRALYQAEAFVADFK-QCNEAKKFINDYVSNQTQGKIAELF--SELDERTSMVLVNYLLFKGKWKVPFNPNDTFESEFYLDEKRSVKVPMMKIK 243          
BLAST of FC921282 vs. ExPASy Swiss-Prot
Match: SPI2_MOUSE (Serpin I2 OS=Mus musculus GN=Serpini2 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 8.019e-17
Identity = 55/194 (28.35%), Postives = 98/194 (50.52%), Query Frame = 2
Query:   92 DVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKSDDQLNTFASELVAVVFADGSPSGGPRLSVANGVWIDKSLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREA-NMWAEKETNGLVKEVLPPGSVDNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFM 670
            D A+ L K ++L+    +N++FSP    +LL ++  G+KG    Q+L  L+ +       F S L ++  A          ++A+ +++ +   +K T+       +++A+  VDF    A+ S +A + W E +T+G +K +         TRL+  NA+YFKG W + F    T+  DF   +G ++KVP M
Sbjct:   28 DFAVDLYKAISLSHK--NNIIFSPLGTTMLLGMVQLGAKGKAQQQILKTLRMRGTPAGEEF-SVLKSLFSAISKKKQEFTFNLASALYLQEGFIVKETYLHSNKEFFQSATKLVDFLD--AKTSAQAISTWVESKTDGKIKNMFSEEEFGPLTRLVLVNAIYFKGDWKQKFRKEDTEMTDFTKKDGSTVKVPMM 216          
BLAST of FC921282 vs. ExPASy Swiss-Prot
Match: SPB10_CHICK (Heterochromatin-associated protein MENT OS=Gallus gallus GN=SERPINB10 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 8.019e-17
Identity = 57/203 (28.08%), Postives = 85/203 (41.87%), Query Frame = 2
Query:  137 KDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLK-------------------------SKSDDQLNTFASELVAVVFADGSPSGGPRLSVANGVWIDKSLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREANMWAEKETNGLVKEVLPPGSVDNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFM 670
            +D N+ FSP SI   L+L    +KG T  ++   L                              +Q     S    ++ A   P     L  AN ++++K+ +L  T+ Q+    YKA   +V+F+T   +  +E N W EK+T   +K +L    V  +TRLI  NA+YFK  W   F + KT    F L    S  V  M
Sbjct:   24 RDKNIFFSPWSISSALALTYLAAKGSTAREMAEVLHFTEAVRAESSSVARPSRGRPKRRRMDPEHEQAENIHSGFKELLTAFNKPRNNYSLRSANRIYVEKTYALLPTYLQLSKKYYKAEPQKVNFKTAPEQSRKEINTWVEKQTESKIKNLLSSDDVKATTRLILVNAIYFKAEWEVKFQAEKTSIQPFRLSKNKSKPVKMM 226          
BLAST of FC921282 vs. ExPASy Swiss-Prot
Match: SPA3C_MOUSE (Serine protease inhibitor A3C OS=Mus musculus GN=Serpina3c PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 8.019e-17
Identity = 65/223 (29.15%), Postives = 111/223 (49.78%), Query Frame = 2
Query:   26 FIVSRESSLQSMDVRESISNQTDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFL-----KSKSDDQLNTFASELVAVVFADGSPSGGPRLSVANGVWIDKSLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREANMWAEKETNGLVKEVLPPGSVDNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSK 679
            F   +E+  Q +D     S  TD A SL K +AL    D+N+VFSP SI   L+++S G+KG TL+++L  L     ++   D    F   L  +      P    ++S  + ++++K L +   F++    +Y+A +   DFQ +  E ++  N +   +T   +K ++    +D  T ++  N +YFKG W   F+   T + +F+L    S+KVP M  K
Sbjct:   32 FHKDKENGTQ-LDSLTLASINTDFAFSLYKKLALKNP-DTNIVFSPLSISAALAIVSLGAKGNTLEEILEGLNFNLTETPEADIHQGFGHLLQRL----SHPGEQVQISTGSALFVEKHLQILAEFQEKARALYQAEAFTADFQ-QPLEATKLINDYVSNQTQRKIKGLI--SDLDTDTLMVLVNYIYFKGKWKMPFNPRDTFESEFYLDVKRSVKVPMMKIK 245          
BLAST of FC921282 vs. ExPASy Swiss-Prot
Match: SPB10_BOVIN (Serpin B10 OS=Bos taurus GN=SERPINB10 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.047e-16
Identity = 60/215 (27.91%), Postives = 97/215 (45.12%), Query Frame = 2
Query:   98 ALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKSDDQLNTFA--------------------SELVAVVFADGSPSGGPRLSVANGVWIDKSLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREANMWAEKETNGLVKEVLPPGSVDNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKK 682
            AL  +K +A   A+  N+ FSP  I   L+++  G+KG T  Q+   L+  S DQ + F                     S+   ++    S S    L  AN ++ +K+      + + V   + A    V+F   + ++ +E N W EK+T G +  +LP  +VD +TR++  NALYFKG W   F    T +  F +    S  V  M+ K+
Sbjct:   12 ALEFSKKLA-ESAEGKNIFFSPWGISASLAMVYLGTKGTTAAQMAQVLQF-SRDQDSKFCPDSEKKRKMEFNVGKPEEIYSDFQTLISEINSSSHACILKTANRIYGEKTFPFHKKYLEDVKTYFGAEPQSVNFIGASDQIRKEINSWVEKQTEGKILNLLPDDAVDPTTRMVLVNALYFKGVWEHQFLVQNTTEKSFKINKTTSKPVQMMSMKE 224          
The following BLAST results are available for this feature:
BLAST of FC921282 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 184
Match NameE-valueIdentityDescription
SPI2_HUMAN4.701e-1728.78Serpin I2 OS=Homo sapiens GN=SERPINI2 PE=2 SV=1[more]
SPB10_MOUSE4.701e-1725.58Serpin B10 OS=Mus musculus GN=Serpinb10 PE=2 SV=1[more]
PAI1_RAT4.701e-1730.62Plasminogen activator inhibitor 1 OS=Rattus norveg... [more]
ILEU_PIG4.701e-1731.66Leukocyte elastase inhibitor OS=Sus scrofa GN=SERP... [more]
SPA3L_RAT6.140e-1728.29Serine protease inhibitor A3L OS=Rattus norvegicus... [more]
SPA3K_RAT6.140e-1728.43Serine protease inhibitor A3K OS=Rattus norvegicus... [more]
SPI2_MOUSE8.019e-1728.35Serpin I2 OS=Mus musculus GN=Serpini2 PE=1 SV=1[more]
SPB10_CHICK8.019e-1728.08Heterochromatin-associated protein MENT OS=Gallus ... [more]
SPA3C_MOUSE8.019e-1729.15Serine protease inhibitor A3C OS=Mus musculus GN=S... [more]
SPB10_BOVIN1.047e-1627.91Serpin B10 OS=Bos taurus GN=SERPINB10 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC32103B12EF RVDevelopN Citrus clementina cDNA clone C32103B12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921282 ID=FC921282; Name=FC921282; organism=Citrus clementina; type=EST; length=706bp
GATCTAAAACTTGTCAGTCCGTTTCTTCATCGTTTCCAGAGAGAGTAGTT
TGCAGAGCATGGACGTACGCGAATCAATCAGCAACCAAACCGACGTCGCT
TTGTCTCTAACAAAGCACGTTGCCCTAACCGAAGCTAAAGACTCGAACCT
CGTCTTCTCGCCGTCATCGATCCACGTTCTGCTGAGCCTGATCTCGGCTG
GATCCAAGGGCCCCACTCTCGACCAGTTGCTCTCTTTTCTCAAGTCCAAA
TCCGACGACCAACTTAACACCTTCGCCTCCGAACTCGTCGCCGTCGTTTT
TGCCGACGGAAGTCCTAGCGGCGGGCCCCGCTTGTCCGTGGCCAATGGTG
TTTGGATTGATAAGTCACTTTCTCTCAAGAATACTTTCAAACAGGTTGTG
GACAACGTCTACAAGGCTGCTTCTAATCAAGTCGATTTCCAAACCAAGGC
TGCTGAAGTATCCAGAGAAGCGAACATGTGGGCTGAGAAGGAGACCAATG
GCCTTGTTAAAGAGGTTCTTCCTCCTGGTTCAGTTGACAATTCAACCAGG
CTCATCTTTGCAAATGCACTATACTTCAAAGGAGCTTGGAATGAAACATT
TGATTCATCAAAGACAAAAGACTATGACTTTCACCTTCTCAATGGAGGCT
CCATTAAAGTGCCGTTCATGACTAGCAAGAAGAATCAGTTTGTGAGTGCC
TTTGAT
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