FC921285
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921285 vs. ExPASy Swiss-Prot
Match: KCAB1_MUSPU (Voltage-gated potassium channel subunit beta-1 OS=Mustela putorius GN=KCNAB1 PE=2 SV=1) HSP 1 Score: 242.276 bits (617), Expect = 1.971e-63 Identity = 108/211 (51.18%), Postives = 154/211 (72.99%), Query Frame = 2 Query: 83 MQYRHLGRSGLRVSQLAYGAWVSFGNQLDVKEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFWGGQGPNDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPIVEQPEYNVLSRHKGEAEYLPLYSNYGIXLTTWSPLA 715 M YR+LG+SGLRVS L G WV+FG Q+ + A+ L+ + GVN FD AEVYA G+AE I+G I++ GW+RS +V++TK++WGG+ ++GLSRKHI+EG K SL+RL ++YVDV++ +RPD++TP+EE VRAM +VI++G A YWGTS WSA +I EA+ +A + +++ P+ EQ EY++ R K E + LY G+ TWSPLA Sbjct: 78 MAYRNLGKSGLRVSCLGLGTWVTFGGQISDEVAERLMTIAYESGVNLFDTAEVYAAGKAEVILGSIIKKKGWRRSSLVITTKLYWGGKAETERGLSRKHIIEGLKGSLQRLQLEYVDVVFANRPDSNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNMIPPVCEQAEYHLFQREKVEVQLPELYHKIGVGAMTWSPLA 288
BLAST of FC921285 vs. ExPASy Swiss-Prot
Match: KCAB3_XENLA (Voltage-gated potassium channel subunit beta-3 OS=Xenopus laevis GN=kcnab3 PE=2 SV=1) HSP 1 Score: 240.736 bits (613), Expect = 5.736e-63 Identity = 108/211 (51.18%), Postives = 154/211 (72.99%), Query Frame = 2 Query: 83 MQYRHLGRSGLRVSQLAYGAWVSFGNQLDVKEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFWGGQGPNDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPIVEQPEYNVLSRHKGEAEYLPLYSNYGIXLTTWSPLA 715 M+YR+LG+SGLRVS L G WV+FG+Q+ + A++L+ +HGVN FD AEVYA GRAE +G+ +++ W+RS VV+TKI+WGGQ ++GLSRKHI+EG + SL+RL +DYVD+++ +R D ++P+EE VRAM +VI++G A YWGTS WSA +I EA+ +A + +L+ P+ EQ EY++ R K E + LY G+ TWSPLA Sbjct: 71 MKYRNLGKSGLRVSCLGLGTWVTFGSQISDEVAENLMTVAYEHGVNLFDTAEVYAAGRAERTLGKILKKKEWRRSSYVVTTKIYWGGQAETERGLSRKHIIEGLRGSLERLQLDYVDIVFANRMDPNSPMEEIVRAMTFVINQGMAMYWGTSRWSAMEIMEAYSVARQFNLIPPVCEQAEYHLFQREKVETQLPELYHKIGVGSMTWSPLA 281
BLAST of FC921285 vs. ExPASy Swiss-Prot
Match: KCAB1_RABIT (Voltage-gated potassium channel subunit beta-1 OS=Oryctolagus cuniculus GN=KCNAB1 PE=2 SV=1) HSP 1 Score: 240.35 bits (612), Expect = 7.491e-63 Identity = 107/211 (50.71%), Postives = 154/211 (72.99%), Query Frame = 2 Query: 83 MQYRHLGRSGLRVSQLAYGAWVSFGNQLDVKEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFWGGQGPNDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPIVEQPEYNVLSRHKGEAEYLPLYSNYGIXLTTWSPLA 715 M +R+LG+SGLRVS L G WV+FG Q+ + A+ L+ + GVN FD AEVYA G+AE I+G I++ GW+RS +V++TK++WGG+ ++GLSRKHI+EG K SL+RL ++YVDV++ +RPD++TP+EE VRAM +VI++G A YWGTS WSA +I EA+ +A + +++ P+ EQ EY++ R K E + LY G+ TWSPLA Sbjct: 89 MPHRNLGKSGLRVSCLGLGTWVTFGGQISDEVAERLMTIAYESGVNLFDTAEVYAAGKAEVILGSIIKKKGWRRSSLVITTKLYWGGKAETERGLSRKHIIEGLKGSLQRLQLEYVDVVFANRPDSNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNMIPPVCEQAEYHLFQREKVEVQLPELYHKIGVGAMTWSPLA 299
BLAST of FC921285 vs. ExPASy Swiss-Prot
Match: KCAB1_HUMAN (Voltage-gated potassium channel subunit beta-1 OS=Homo sapiens GN=KCNAB1 PE=2 SV=1) HSP 1 Score: 240.35 bits (612), Expect = 7.491e-63 Identity = 107/211 (50.71%), Postives = 154/211 (72.99%), Query Frame = 2 Query: 83 MQYRHLGRSGLRVSQLAYGAWVSFGNQLDVKEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFWGGQGPNDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPIVEQPEYNVLSRHKGEAEYLPLYSNYGIXLTTWSPLA 715 M +R+LG+SGLRVS L G WV+FG Q+ + A+ L+ + GVN FD AEVYA G+AE I+G I++ GW+RS +V++TK++WGG+ ++GLSRKHI+EG K SL+RL ++YVDV++ +RPD++TP+EE VRAM +VI++G A YWGTS WSA +I EA+ +A + +++ P+ EQ EY++ R K E + LY G+ TWSPLA Sbjct: 89 MPHRNLGKSGLRVSCLGLGTWVTFGGQISDEVAERLMTIAYESGVNLFDTAEVYAAGKAEVILGSIIKKKGWRRSSLVITTKLYWGGKAETERGLSRKHIIEGLKGSLQRLQLEYVDVVFANRPDSNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNMIPPVCEQAEYHLFQREKVEVQLPELYHKIGVGAMTWSPLA 299
BLAST of FC921285 vs. ExPASy Swiss-Prot
Match: KCAB3_RAT (Voltage-gated potassium channel subunit beta-3 OS=Rattus norvegicus GN=Kcnab3 PE=2 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 3.718e-62 Identity = 109/211 (51.66%), Postives = 149/211 (70.62%), Query Frame = 2 Query: 83 MQYRHLGRSGLRVSQLAYGAWVSFGNQLDVKEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFWGGQGPNDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPIVEQPEYNVLSRHKGEAEYLPLYSNYGIXLTTWSPLA 715 M+YR+LG+SGLRVS L G WV+FG+Q+ + A+ LL +HGVN FD AEVYA G+AE +G ++ GW+RS V++TKIFWGGQ ++GLSRKHI+EG + SL RL ++YVD+++ +R D S+P+EE VRAM YVI++G A YWGTS WSA +I EA+ +A + +L+ P+ EQ E + R K E + LY G+ TWSPLA Sbjct: 78 MKYRNLGKSGLRVSCLGLGTWVTFGSQISDETAEDLLTVAYEHGVNLFDTAEVYAAGKAERTLGNILKSKGWRRSSYVITTKIFWGGQAETERGLSRKHIIEGLQGSLDRLQLEYVDIVFANRSDPSSPMEEIVRAMTYVINQGLALYWGTSRWSAAEIMEAYSMARQFNLIPPVCEQAENHFFQREKVEMQLPELYHKIGVGSVTWSPLA 288
BLAST of FC921285 vs. ExPASy Swiss-Prot
Match: KCAB3_HUMAN (Voltage-gated potassium channel subunit beta-3 OS=Homo sapiens GN=KCNAB3 PE=1 SV=2) HSP 1 Score: 233.417 bits (594), Expect = 9.158e-61 Identity = 105/211 (49.76%), Postives = 148/211 (70.14%), Query Frame = 2 Query: 83 MQYRHLGRSGLRVSQLAYGAWVSFGNQLDVKEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFWGGQGPNDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPIVEQPEYNVLSRHKGEAEYLPLYSNYGIXLTTWSPLA 715 M+YR+LG+SGLRVS L G WV+FG+Q+ + A+ +L +HGVN FD AEVYA G+AE +G ++ GW+RS V++TKIFWGGQ ++GLSRKHI+EG + SL+RL + YVD+++ +R D + P+EE VRAM YVI++G A YWGTS W A +I EA+ +A + +L+ P+ EQ E+++ R K E + LY G+ TW PLA Sbjct: 78 MKYRNLGKSGLRVSCLGLGTWVTFGSQISDETAEDVLTVAYEHGVNLFDTAEVYAAGKAERTLGNILKSKGWRRSSYVITTKIFWGGQAETERGLSRKHIIEGLRGSLERLQLGYVDIVFANRSDPNCPMEEIVRAMTYVINQGLALYWGTSRWGAAEIMEAYSMARQFNLIPPVCEQAEHHLFQREKVEMQLPELYHKIGVGSVTWYPLA 288
BLAST of FC921285 vs. ExPASy Swiss-Prot
Match: KCAB_SCHPO (Putative voltage-gated potassium channel subunit beta OS=Schizosaccharomyces pombe GN=SPCC965.06 PE=2 SV=1) HSP 1 Score: 230.72 bits (587), Expect = 5.936e-60 Identity = 112/211 (53.08%), Postives = 148/211 (70.14%), Query Frame = 2 Query: 89 YRHLGRSGLRVSQLAYGAWVSFGNQ-LDVKEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFWGG--QGPNDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPIVEQPEYNVLSRHKGEAEYLPLYSNYGIXLTTWSPL 712 +R LGRSGL+VS + G W+++GN+ DV+ K+ L+ D G+N FD AE+Y+NG +E +MG+AI+ELGW RS+ V++TK+F+G + PN GLSRKHI+EG ASLKRL + YVDVI HRPD S P+EE VRA +I G AFYWGTSEWSA +I A IA + +L+ P+ +QP+YN L+R E + LPL YG T WSPL Sbjct: 15 FRFLGRSGLKVSAFSLGGWLTYGNEGYDVEHTKNCLKQAWDLGINTFDTAEIYSNGNSETVMGKAIKELGWDRSEYVITTKVFFGAGTKLPNTTGLSRKHIIEGLNASLKRLGLPYVDVIMAHRPDPSVPMEEVVRAFTQLIQDGKAFYWGTSEWSAFEIEHAHHIATKYNLIAPVADQPQYNYLTRDHFEKDLLPLQQIYGYGATVWSPL 225
BLAST of FC921285 vs. ExPASy Swiss-Prot
Match: YAJO_ECOLI (Uncharacterized oxidoreductase yajO OS=Escherichia coli (strain K12) GN=yajO PE=3 SV=2) HSP 1 Score: 140.198 bits (352), Expect = 1.055e-32 Identity = 85/219 (38.81%), Postives = 128/219 (58.45%), Query Frame = 2 Query: 83 MQYRHLGRSGLRVSQLAYGAWVSFGNQ--------LDVKEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFWGGQGPNDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPIVEQPEYNVLSRHKGEAEYLPLYSNYGIXLTTWSPLA 715 MQY LG++ LRVS+L G ++FG L + ++ +++ + G+NFFD A Y++G +EEI+G+A+R+ +R D+VV+TK+F G +GLSR I+ SL+RL MDYVD++ HR D +TPIEET+ A+N V+ G A Y G S A Q +A + ++ + Q YN++ R + E E LPL G+ + WSPLA Sbjct: 1 MQYNPLGKTDLRVSRLCLGC-MTFGEPDRGNHAWTLPEESSRPIIKRALEGGINFFDTANSYSDGSSEEIVGRALRDFA-RREDVVVATKVFHR-VGDLPEGLSRAQILRSIDDSLRRLGMDYVDILQIHRWDYNTPIEETLEALNDVVKAGKARYIGASSMHASQFAQALELQKQHGWAQFVSMQDHYNLIYREE-EREMLPLCYQEGVAVIPWSPLA 215
BLAST of FC921285 vs. ExPASy Swiss-Prot
Match: YGHZ_ECOLI (Uncharacterized protein yghZ OS=Escherichia coli (strain K12) GN=yghZ PE=1 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.577e-28 Identity = 75/215 (34.88%), Postives = 121/215 (56.28%), Query Frame = 2 Query: 83 MQYRHLGRSGLRVSQLAYGAWVSFGNQLDVKEAKSLLQCCRDHGVNFFDNAEVYAN--GRAEEIMGQAIRE-LGWKRSDIVVSTKIFWG-GQGPNDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPIVEQPEYNVLSRHKGEAEYLPLYSNYGIXLTTWSPLA 715 MQYR+ G+SGLR+ L+ G W +FG+ ++ +++L+ D G+ FD A Y G AEE G+ +RE R ++++STK + GP G SRK+++ SLKR+ ++YVD+ Y HR D +TP+EET A+ + + G A Y G S +S ++ T+ R + ++ QP YN+L+R ++ L N G+ ++PLA Sbjct: 13 MQYRYCGKSGLRLPALSLGLWHNFGHVNALESQRAILRKAFDLGITHFDLANNYGPPPGSAEENFGRLLREDFAAYRDELIISTKAGYDMWPGPYGSGGSRKYLLASLDQSLKRMGLEYVDIFYSHRVDENTPMEETASALAHAVQSGKALYVGISSYSPER-TQKMVELLREWKIPLLIHQPSYNLLNRWVDKSGLLDTLQNNGVGCIAFTPLA 226
BLAST of FC921285 vs. ExPASy Swiss-Prot
Match: YGHZ_ECO57 (Uncharacterized protein yghZ OS=Escherichia coli O157:H7 GN=yghZ PE=4 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.577e-28 Identity = 73/215 (33.95%), Postives = 120/215 (55.81%), Query Frame = 2 Query: 83 MQYRHLGRSGLRVSQLAYGAWVSFGNQLDVKEAKSLLQCCRDHGVNFFDNAEVYAN--GRAEEIMGQAIRE-LGWKRSDIVVSTKIFWG-GQGPNDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPIVEQPEYNVLSRHKGEAEYLPLYSNYGIXLTTWSPLA 715 MQYR+ G+SGLR+ L+ G W +FG+ ++ +++L+ D G+ FD A Y G AEE G+ +RE R ++++STK + GP G SRK+++ SLKR+ ++YVD+ Y HR D +TP+EET A+ + + G A Y G S +S ++ + + + ++ QP YN+L+R ++ L N G+ ++PLA Sbjct: 13 MQYRYCGKSGLRLPALSLGLWHNFGHVNALESQRAILRKAFDLGITHFDLANNYGPPPGSAEENFGRLLREDFAAYRDELIISTKAGYDMWPGPYGSGGSRKYLLASLDQSLKRMGLEYVDIFYSHRVDENTPMEETASALAHAVQSGKALYVGISSYSPERTQKMVELLHEWK-IPLLIHQPSYNLLNRWVDKSGLLDTLQNNGVGCIAFTPLA 226 The following BLAST results are available for this feature:
BLAST of FC921285 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 44
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921285 ID=FC921285; Name=FC921285; organism=Citrus clementina; type=EST; length=716bpback to top |