FC921285

Overview
NameFC921285
Unique NameFC921285
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length716
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921285 vs. ExPASy Swiss-Prot
Match: AAD_PHACH (Aryl-alcohol dehydrogenase [NADP+] OS=Phanerochaete chrysosporium PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.702e-12
Identity = 60/218 (27.52%), Postives = 100/218 (45.87%), Query Frame = 2
Query:  110 GLRVSQLAYGA------WVSFGNQLDVKEAK-SLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTK---IFWGG-------QGPNDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPIVEQPEYNVLSRHKGEAEYLPLYSNYGIXLTTWSPL 712
            GL VS +  GA      W  +G     KEA   LL    + G NF D A VY +  +EE +G+ +   G  R  +VV+TK   ++  G       Q     G S K +      SL++L   Y+D+ Y H  D +  IEE +  ++ ++ +G   Y G S+  A  +++A   A        ++ + E+N+  R   E + +P+  + G+ +  W+ L
Sbjct:   25 GLHVSPIQLGAMSIGDKWHPYGMGTMDKEASFKLLDAFYNAGGNFIDTANVYQDETSEEFIGEWMEARG-NRDQMVVATKYSLVYKRGASFEEIPQKTQYVGNSLKSMHISVHDSLRKLRTSYIDIFYVHFWDYTCTIEEVMNGLHNLVAQGKVLYLGVSDTPAWVVSKANNYARMAGKTPFVIYEGEWNITMRDM-ERDIIPMCIHEGMAIAPWNVL 240          
BLAST of FC921285 vs. ExPASy Swiss-Prot
Match: STCV_EMENI (Putative sterigmatocystin biosynthesis dehydrogenase stcV OS=Emericella nidulans GN=stcV PE=3 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 7.861e-12
Identity = 59/215 (27.44%), Postives = 98/215 (45.58%), Query Frame = 2
Query:  107 SGLRVSQLAYGA------WVSFGNQLDVKEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFWGGQ--GP-----NDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPIVEQPEYNVLSRHKGEAEYLPLYSNYGIXLTTWSPL 712
            +G+RVS L  G       W      +  + A +LL    + G NF D A  Y    +E+ +G+ +   G  R ++V++TK     +  GP     N +G   K +    +ASL +L  DY+D++Y H  D ST +EE ++++++++  G     G S+  A  + +    A    L    V Q  +   S    E E LP+  + G+ L  W  L
Sbjct:   23 AGIRVSPLCLGTMHFGGQWTRAMGDVTKETAFALLDRFYEAGGNFIDTANFYQGEGSEKWLGEWVASRG-NRDELVLATKYTMSYRLTGPEKIKSNFQGSHSKSLRLSVEASLAKLRTDYIDLLYVHMWDFSTSVEEVMQSLHHLVAAGKVLNIGISDAPAWVVAKCNEYARFHGLTRFCVYQGRW-ACSYRDFEREILPMCQSEGLALAPWGAL 235          
BLAST of FC921285 vs. ExPASy Swiss-Prot
Match: YCSN_BACSU (Uncharacterized oxidoreductase ycsN OS=Bacillus subtilis GN=ycsN PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.095e-11
Identity = 60/211 (28.44%), Postives = 96/211 (45.50%), Query Frame = 2
Query:  113 LRVSQLAYGAW-VSFGNQLDVKEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFWGGQGP-------NDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQ--ITEAWGIAERLDLVGPIVEQPEYNVLSRHKGEAEYLPLYSNYGIXLTTWSPLA 715
            L+ S++ +G W ++  N  D  E  SL++ C DHG+  FD+A++Y     E++ G A+      R +I + TK     + P       +    S+ HI+   + SL  L  DY+D++  HRPD     E    A   +   G   Y+G S +   Q  + E++ + E+  LV   +E   Y + +   G    L L     I    WSPLA
Sbjct:   10 LQFSRVIHGLWRLNEWNYSDA-ELLSLIEWCIDHGITTFDHADIYGGYTCEKLFGNALALSPGLRENIELVTKCGIVLESPERPAHRSHHYNTSKSHILASVEQSLMNLRTDYIDMLLIHRPDPLMDPEGVAEAFQALKCSGKVRYFGVSNFKDHQYRMLESY-LPEK--LVTNQIELSAYELENMLDGT---LNLCQEKRIPPMAWSPLA 213          
BLAST of FC921285 vs. ExPASy Swiss-Prot
Match: AAD3_YEAST (Putative aryl-alcohol dehydrogenase AAD3 OS=Saccharomyces cerevisiae GN=AAD3 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.655e-11
Identity = 55/208 (26.44%), Postives = 102/208 (49.04%), Query Frame = 2
Query:  107 SGLRVSQLAY-GAWVSFGNQLDVKEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKI------FWGGQG--PNDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPIVEQPEYNVLSRHKGEAEYLPLYSNYGIXLTTW 703
            S L + +++Y GA   F   ++   A  LL    + G NF D A    N ++EE +G+ I+     R  IV++TK       +  G+    N  G  ++ +    + SL++L  D++D++Y H  D  + IEE + +++ ++ +G   Y G S+  A  ++ A   A         + Q ++NVL+R   E + +P+  ++G+ L  W
Sbjct:   27 SPLILGEVSYDGARSDFLKSMNKNRAFELLDTFYEAGGNFIDAANNCQNEQSEEWIGEWIQSRRL-RDQIVIATKFIKSDKKYKAGESNTANYCGNHKRSLHVSVRDSLRKLQTDWIDILYVHWWDYMSSIEEFMDSLHILVQQGKVLYLGVSDTPAWVVSAANYYATSYGKTPFSIYQGKWNVLNR-DFERDIIPMARHFGMALAPW 232          
The following BLAST results are available for this feature:
BLAST of FC921285 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
AAD_PHACH2.702e-1227.52Aryl-alcohol dehydrogenase [NADP+] OS=Phanerochaet... [more]
STCV_EMENI7.861e-1227.44Putative sterigmatocystin biosynthesis dehydrogena... [more]
YCSN_BACSU5.095e-1128.44Uncharacterized oxidoreductase ycsN OS=Bacillus su... [more]
AAD3_YEAST6.655e-1126.44Putative aryl-alcohol dehydrogenase AAD3 OS=Saccha... [more]

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Properties
Property NameValue
Genbank descriptionC32103C03EF RVDevelopN Citrus clementina cDNA clone C32103C03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921285 ID=FC921285; Name=FC921285; organism=Citrus clementina; type=EST; length=716bp
GACAGTTTCCAGATTTTCTCGTACACTTCCCCAACAGGCCAAAAAAACAG
ACAACAAAAAGGTTAAAAAAGGAAATTACAAAATGCAATACAGGCACCTG
GGGAGATCGGGGCTGAGAGTGAGCCAGCTCGCGTACGGAGCGTGGGTCAG
CTTCGGGAACCAGTTGGACGTGAAGGAGGCGAAGTCGCTCTTGCAATGCT
GCCGCGACCACGGCGTCAACTTCTTCGACAATGCCGAGGTCTACGCCAAC
GGCCGCGCGGAAGAGATCATGGGCCAGGCCATTCGCGAGCTCGGGTGGAA
GCGATCCGACATCGTCGTTTCCACCAAGATCTTTTGGGGCGGCCAGGGCC
CCAACGATAAAGGCCTCTCCAGAAAACACATTGTCGAGGGCACCAAAGCT
TCCTTGAAACGCCTCGACATGGATTACGTCGACGTTATTTATTGTCACAG
GCCGGACACGTCGACACCGATAGAGGAGACGGTGAGGGCGATGAATTATG
TGATTGATAAGGGGTGGGCGTTTTACTGGGGAACAAGTGAGTGGTCGGCG
CAGCAGATCACCGAGGCTTGGGGGATTGCTGAGCGCTTGGATTTGGTGGG
CCCCATTGTTGAGCAACCAGAGTATAACGTGTTGTCTAGGCACAAGGGTG
AAGCTGAGTACCTCCCTCTATACTCCAATTATGGCATANGTCTTACCACA
TGGAGTCCACTTGCAT
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