FC921294
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921294 vs. ExPASy Swiss-Prot
Match: 3HIDH_ARATH (Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Arabidopsis thaliana GN=At4g20930 PE=2 SV=3) HSP 1 Score: 84.3445 bits (207), Expect = 6.621e-16 Identity = 61/197 (30.96%), Postives = 94/197 (47.72%), Query Frame = 2 Query: 155 VGWIGTGIMGRSMCAHLLNAGYTVTVFNRTLSKAQPLLDIGAHLADSPHSLASQSDVVFSIVGYPSDVRHVLLHPSSGALSG---LRPGGIIVDMTTXXXXXXXXXXXXXXXKNCS------------AIDAPVSGGDRGAKTGTLAIFAGGDESVVQKLNPLFALMGKVN-YMGGSGKGQFAKLAKSITIATTMVG 697 VG+IG G MG M +L+ AGY VTV + + ++G ++P+ +A S+VV +++ S V V ++G L G +RP + +D +T NC+ +DAPVSGG A+ GTL GG E P+ MG+ + Y GGSG G AK+ ++ +A +M+G Sbjct: 40 VGFIGLGNMGFRMVNNLIRAGYKVTVHDINRDVMKMFTEMGVSSRETPYEVAQDSEVVITMLPSSSHVMDVYT-GTNGLLLGENDIRP-ALFIDSST--IDPQTTRKISLAVSNCNLKEKRDNWEKPVMLDAPVSGGVLAAEAGTLTFMVGGPEDAYLAARPILQSMGRTSIYCGGSGNGSAAKICNNLAMAVSMLG 232
BLAST of FC921294 vs. ExPASy Swiss-Prot
Match: MMSB_MYCTU (Probable 3-hydroxyisobutyrate dehydrogenase OS=Mycobacterium tuberculosis GN=mmsB PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.129e-15 Identity = 53/183 (28.96%), Postives = 87/183 (47.54%), Query Frame = 2 Query: 149 TRVGWIGTGIMGRSMCAHLLNAGYTVTVFNRTLSKAQPLLDIGAHLADSPHSLASQSDVVFSIVGYPSDVRHVLLHPSSGALSGLRPGGIIVDMTTXXXXXXXXXXXXXXXKNCSAIDAPVSGGDRGAKTGTLAIFAGGDESVVQKLNPLFALM-GKVNYMGGSGKGQFAKLAKSITIATTMV 694 T + ++G G MG M A+L+ AG+ V F+ + A G + S +++DVV +++ VR + L+ RP + +D +T +DAPVSGG +GA TLA GGDES +++ P+ M GK+ + G +G GQ AK+ ++ +A + Sbjct: 2 TTIAFLGLGNMGAPMSANLVGAGHVVRGFDPAPTAASGAAAHGVAVFRSAPEAVAEADVVITMLPTGEVVRRCY----TDVLAAARPATLFIDSSTISVTDAREVHALAESHGMLQLDAPVSGGVKGAAAATLAFMVGGDESTLRRARPVLEPMAGKIIHCGAAGAGQAAKVCNNMVLAVQQI 180
BLAST of FC921294 vs. ExPASy Swiss-Prot
Match: MMSB_MYCBO (Probable 3-hydroxyisobutyrate dehydrogenase OS=Mycobacterium bovis GN=mmsB PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.129e-15 Identity = 53/183 (28.96%), Postives = 87/183 (47.54%), Query Frame = 2 Query: 149 TRVGWIGTGIMGRSMCAHLLNAGYTVTVFNRTLSKAQPLLDIGAHLADSPHSLASQSDVVFSIVGYPSDVRHVLLHPSSGALSGLRPGGIIVDMTTXXXXXXXXXXXXXXXKNCSAIDAPVSGGDRGAKTGTLAIFAGGDESVVQKLNPLFALM-GKVNYMGGSGKGQFAKLAKSITIATTMV 694 T + ++G G MG M A+L+ AG+ V F+ + A G + S +++DVV +++ VR + L+ RP + +D +T +DAPVSGG +GA TLA GGDES +++ P+ M GK+ + G +G GQ AK+ ++ +A + Sbjct: 2 TTIAFLGLGNMGAPMSANLVGAGHVVRGFDPAPTAASGAAAHGVAVFRSAPEAVAEADVVITMLPTGEVVRRCY----TDVLAAARPATLFIDSSTISVTDAREVHALAESHGMLQLDAPVSGGVKGAAAATLAFMVGGDESTLRRARPVLEPMAGKIIHCGAAGAGQAAKVCNNMVLAVQQI 180
BLAST of FC921294 vs. ExPASy Swiss-Prot
Match: GLYR1_AEDAE (Putative oxidoreductase GLYR1 homolog OS=Aedes aegypti GN=AAEL006684 PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.129e-15 Identity = 54/186 (29.03%), Postives = 87/186 (46.77%), Query Frame = 2 Query: 143 TNTRVGWIGTGIMGRSMCAHLLNAGYTVTVFNRTLSKAQPLLDIGAHLADSPHSLASQSDVVFSIVGYPSDVRHVLLHPSSGALSGLRPGGIIVDMTTXXXXXXXXXXXXXXXKNCSAIDAPVSGGDRGAKTGTLAIFAGGDESVVQKLNPLFALMGKVN-YMGGSGKGQFAKLAKSITIATTMVG 697 +N + G++G GIMG M +LLN+G++V V+NRT +K + + GA +AD+P + +DV FS V P V L+ + G +S G V+MT K ++A + G A+ GTL I A G+ + ++ F + + + YMG G L + + G Sbjct: 272 SNLKFGFLGLGIMGCGMVKNLLNSGHSVVVWNRTATKCRKFQEAGAEVADTPSDVIEMTDVTFSCVADP-QVAKELVFGNCGVMSANLVGKGYVEMTGVDPETSHDIAEQIIAKGGRYLEAQIQGSKNQAEEGTLIILAAGERLLFEECQTCFEAISRNSFYMGDVGNATKMNLVLQMISGVMLAG 456
BLAST of FC921294 vs. ExPASy Swiss-Prot
Match: MMSB_PSEAE (3-hydroxyisobutyrate dehydrogenase OS=Pseudomonas aeruginosa GN=mmsB PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.927e-15 Identity = 55/184 (29.89%), Postives = 87/184 (47.28%), Query Frame = 2 Query: 149 TRVGWIGTGIMGRSMCAHLLNAGYTVTVFNRTLSKAQPLLDIGAHLADSPHSLASQSDVVFSIVGYPSDVRHVLLHPSSGALSGLRPGGIIVDMTTXXXXXXXXXXXXXXXKNCSAIDAPVSGGDRGAKTGTLAIFAGGDESVVQKLNPLFALMGK-VNYMGGSGKGQFAKLAKSITIATTMVG 697 T + ++G G MG M A+LL AG+ V VF+ L++ GA ADS ++VV S++ V + L G L+ + +++D +T K + +DAPVSGG GA+ GTL+ GG + P+ MG+ + + G G GQ AK+ ++ + M G Sbjct: 2 TDIAFLGLGNMGGPMAANLLKAGHRVNVFDLQPKAVLGLVEQGAQGADSALQCCEGAEVVISMLPAGQHVESLYLG-DDGLLARVAGKPLLIDCSTIAPETARKVAEAAAAKGLTLLDAPVSGGVGGARAGTLSFIVGGPAEGFARARPVLENMGRNIFHAGDHGAGQVAKICNNMLLGILMAG 184
BLAST of FC921294 vs. ExPASy Swiss-Prot
Match: 3HIDH_DROME (Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Drosophila melanogaster GN=CG15093 PE=1 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 8.094e-14 Identity = 53/184 (28.80%), Postives = 87/184 (47.28%), Query Frame = 2 Query: 155 VGWIGTGIMGRSMCAHLLNAGYTVTVFNRTLSKAQPLLDIGAHLADSPHSLASQSDVVFSIVGYPSDVRHVLLHPSSGALS--GLRPGGIIVDMTTXXXXXXXXXXXXXXXKNCSAIDAPVSGGDRGAKTGTLAIFAGGDESVVQKLNPLFALMG-KVNYMGGSGKGQFAKLAKSITIATTMVG 697 +G++G G MG +M ++L+ AG+ + VF+ + L GA + LA SD V +++ + ++ S ++ G+ I +D +T K IDAPVSGG GA+ TL GG E+ + + MG K+ + G G GQ AKL ++ +A +M+G Sbjct: 31 IGFVGLGNMGANMASNLIKAGHKLHVFDISKPACDGLAAKGATVYAKTSELAKNSDFVITMLP-----NNAIVDASYDEMTADGVNKDTIFIDSSTISPDLVKSLQKKISAKGARFIDAPVSGGVPGAEQATLTFMVGGTEAEYNAVKAVLECMGKKITHCGVYGMGQAAKLCNNMMLAISMIG 209
BLAST of FC921294 vs. ExPASy Swiss-Prot
Match: YIHU_SHIFL (Uncharacterized oxidoreductase yihU OS=Shigella flexneri GN=yihU PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.381e-13 Identity = 51/170 (30.00%), Postives = 80/170 (47.06%), Query Frame = 2 Query: 155 VGWIGTGIMGRSMCAHLLNAGYTVTVFNRTLSKAQPLLDIGAHLADSPHSLASQSDVVFSIVGYPSDVRHVLLHPSSGALSGLRPGGIIVDMTTXXXXXXXXXXXXXXXKNCSAIDAPVSGGDRGAKTGTLAIFAGGDESVVQKLNPLFALMG-KVNYMGGSGKGQFAKL 661 + +IG G MG M ++LL G+ + VF+ + L+D GA A +P A ++ + +++ VR+VL +G GL +++DM+T K S +D PV A TGTL + AGG V++ P+ MG ++ GG G G KL Sbjct: 4 IAFIGLGQMGSPMASNLLQQGHQLRVFDVNAEAVRHLVDKGATPAANPAQAAKDAEFIITMLPNGDLVRNVLFG-ENGVCEGLSTDALVIDMSTIHPLQTDKLIADMQAKGFSMMDVPVGRTSANAITGTLLLLAGGTAEQVERATPILMAMGSELINAGGPGMGIRVKL 172
BLAST of FC921294 vs. ExPASy Swiss-Prot
Match: YIHU_ECOLI (Uncharacterized oxidoreductase yihU OS=Escherichia coli (strain K12) GN=yihU PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.381e-13 Identity = 51/170 (30.00%), Postives = 80/170 (47.06%), Query Frame = 2 Query: 155 VGWIGTGIMGRSMCAHLLNAGYTVTVFNRTLSKAQPLLDIGAHLADSPHSLASQSDVVFSIVGYPSDVRHVLLHPSSGALSGLRPGGIIVDMTTXXXXXXXXXXXXXXXKNCSAIDAPVSGGDRGAKTGTLAIFAGGDESVVQKLNPLFALMG-KVNYMGGSGKGQFAKL 661 + +IG G MG M ++LL G+ + VF+ + L+D GA A +P A ++ + +++ VR+VL +G GL +++DM+T K S +D PV A TGTL + AGG V++ P+ MG ++ GG G G KL Sbjct: 4 IAFIGLGQMGSPMASNLLQQGHQLRVFDVNAEAVRHLVDKGATPAANPAQAAKDAEFIITMLPNGDLVRNVLFG-ENGVCEGLSTDALVIDMSTIHPLQTDKLIADMQAKGFSMMDVPVGRTSANAITGTLLLLAGGTAEQVERATPILMAMGSELINAGGPGMGIRVKL 172
BLAST of FC921294 vs. ExPASy Swiss-Prot
Match: GLYR1_DROPS (Putative oxidoreductase GLYR1 homolog OS=Drosophila pseudoobscura pseudoobscura GN=GA18401 PE=3 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 1.381e-13 Identity = 52/189 (27.51%), Postives = 88/189 (46.56%), Query Frame = 2 Query: 140 PTNTRVGWIGTGIMGRSMCAHLLNAGYTVTVFNRTLSKAQPLLDIGAHLADSPHSLASQSDVVFSIVGYPSDVRHVLLHPSSGA--LSGLRPGGIIVDMTTXXXXXXXXXXXXXXXKNCSAIDAPVSGGDRGAKTGTLAIFAGGDESVVQKLNPLFALMGK-VNYMGGSGKGQFAKLAKSITIATTMVG 697 P+ G++G G+MG ++ L+ G+ V V+NRT+ K QP ++ GA + D+P + +D++F V P + L+ + G L LR V+M+T N ++A + G + A G L I AGGD +V ++ + F + K ++G G L A ++VG Sbjct: 323 PSELTFGFLGLGMMGSTIVKDLIYTGHKVVVWNRTIDKCQPFVEAGAEVKDTPMDVVEAADIIFCCVSDPKGAKD-LVFGNCGVLQLKDLR-NKAYVEMSTVDPDTSLDIGEGIKQCNGRYLEAQIHGSRQEAADGMLIILAGGDRTVFEECHSCFKTIAKNTFFLGNVGNACKVNLILQTIQAVSLVG 509
BLAST of FC921294 vs. ExPASy Swiss-Prot
Match: GLYR1_DROME (Putative oxidoreductase GLYR1 homolog OS=Drosophila melanogaster GN=CG4747 PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.381e-13 Identity = 52/189 (27.51%), Postives = 87/189 (46.03%), Query Frame = 2 Query: 140 PTNTRVGWIGTGIMGRSMCAHLLNAGYTVTVFNRTLSKAQPLLDIGAHLADSPHSLASQSDVVFSIVGYPSDVRHVLLHPSSGALSGLRP--GGIIVDMTTXXXXXXXXXXXXXXXKNCSAIDAPVSGGDRGAKTGTLAIFAGGDESVVQKLNPLFALMGK-VNYMGGSGKGQFAKLAKSITIATTMVG 697 P+ G++G G+MG ++ L+ G+ V V+NRT+ K QP + GA + D+P + +DV+F V P + L+ + G L L+ V+M+T N ++A + G + A G L I AGGD SV ++ + F + K ++G G L + ++VG Sbjct: 313 PSEQTFGFLGLGMMGSTIVKDLIYTGHKVVVWNRTIDKCQPFAEAGAEVKDTPMDVVEAADVIFCCVSDPKGAKD-LVFGNCGVLQ-LKDLNNKAYVEMSTIDPDTSLDIGEGIKQCNGRYLEAQIHGSRQEAAEGMLIILAGGDRSVFEECHSCFKTIAKNTFFLGNIGNACKVNLILQTILGVSLVG 499 The following BLAST results are available for this feature:
BLAST of FC921294 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921294 ID=FC921294; Name=FC921294; organism=Citrus clementina; type=EST; length=698bpback to top |