FC921297
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921297 vs. ExPASy Swiss-Prot
Match: MSRA_SHIB3 (Peptide methionine sulfoxide reductase msrA OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=msrA PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 9.488e-26 Identity = 66/155 (42.58%), Postives = 92/155 (59.35%), Query Frame = 3 Query: 159 LKAAVFALGSFWSSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYDPRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSKSS----IVTTQIQQLVAFYPAEPEHQKFELKRNPF 599 ++ A+FA+G FW E++F L GV T GY GG NP +R + GD HAE+V++ YDP VI++ QLL+VFW +HD Q QG D G QYRS I+ E+ A S ER Q ++ +TT+I FY AE +HQ++ L +NP+ Sbjct: 43 MEIAIFAMGCFWGVESLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYDPSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAMLAADDDRHITTEIANATPFYYAEDDHQQY-LHKNPY 196
BLAST of FC921297 vs. ExPASy Swiss-Prot
Match: MSRA_ESCF3 (Peptide methionine sulfoxide reductase msrA OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=msrA PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.239e-25 Identity = 65/155 (41.94%), Postives = 89/155 (57.42%), Query Frame = 3 Query: 159 LKAAVFALGSFWSSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGD----HAESVQVEYDPRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQ----MKSKSSIVTTQIQQLVAFYPAEPEHQKFELKRNPF 599 ++ A+FA+G FW E +F L GV T GY GG NP +R + HAE+V++ YDP VI++ QLL+VFW +HD Q QG D G QYRS I+ E+ A S+ER Q + VTT+I FY AE +HQ++ L +NP+ Sbjct: 43 MEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGETGHAEAVRIVYDPSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDSAARASRERFQAAMIAANDDRPVTTEIANATPFYYAEDDHQQY-LHKNPY 196
BLAST of FC921297 vs. ExPASy Swiss-Prot
Match: MSRA_ECOSE (Peptide methionine sulfoxide reductase msrA OS=Escherichia coli (strain SE11) GN=msrA PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.239e-25 Identity = 66/155 (42.58%), Postives = 91/155 (58.71%), Query Frame = 3 Query: 159 LKAAVFALGSFWSSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYDPRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSKSS----IVTTQIQQLVAFYPAEPEHQKFELKRNPF 599 ++ A+FA+G FW E +F L GV T GY GG NP +R + GD HAE+V++ YDP VI++ QLL+VFW +HD Q QG D G QYRS I+ E+ A S ER Q ++ +TT+I FY AE +HQ++ L +NP+ Sbjct: 43 MEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYDPSVISYEQLLQVFWENHDPAQGMRQGNDQGTQYRSAIYPLTPEQDAAARASLERFQAAMLAADDDRRITTEIANATPFYYAEDDHQQY-LHKNPY 196
BLAST of FC921297 vs. ExPASy Swiss-Prot
Match: MSRA_SHISS (Peptide methionine sulfoxide reductase msrA OS=Shigella sonnei (strain Ss046) GN=msrA PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.618e-25 Identity = 66/155 (42.58%), Postives = 91/155 (58.71%), Query Frame = 3 Query: 159 LKAAVFALGSFWSSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYDPRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSKSS----IVTTQIQQLVAFYPAEPEHQKFELKRNPF 599 ++ A+FA+G FW E +F L GV T GY GG NP +R + GD HAE+V++ YDP VI++ QLL+VFW +HD Q QG D G QYRS I+ E+ A S ER Q ++ +TT+I FY AE +HQ++ L +NP+ Sbjct: 43 MEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYDPSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAMLAADDDRHITTEIANATPFYYAEDDHQQY-LHKNPY 196
BLAST of FC921297 vs. ExPASy Swiss-Prot
Match: MSRA_SHIFL (Peptide methionine sulfoxide reductase msrA OS=Shigella flexneri GN=msrA PE=3 SV=2) HSP 1 Score: 116.316 bits (290), Expect = 1.618e-25 Identity = 66/155 (42.58%), Postives = 91/155 (58.71%), Query Frame = 3 Query: 159 LKAAVFALGSFWSSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYDPRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSKSS----IVTTQIQQLVAFYPAEPEHQKFELKRNPF 599 ++ A+FA+G FW E +F L GV T GY GG NP +R + GD HAE+V++ YDP VI++ QLL+VFW +HD Q QG D G QYRS I+ E+ A S ER Q ++ +TT+I FY AE +HQ++ L +NP+ Sbjct: 43 MEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYDPSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAMLAADDDRHITTEIANATPFYYAEDDHQQY-LHKNPY 196
BLAST of FC921297 vs. ExPASy Swiss-Prot
Match: MSRA_SHIF8 (Peptide methionine sulfoxide reductase msrA OS=Shigella flexneri serotype 5b (strain 8401) GN=msrA PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.618e-25 Identity = 66/155 (42.58%), Postives = 91/155 (58.71%), Query Frame = 3 Query: 159 LKAAVFALGSFWSSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYDPRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSKSS----IVTTQIQQLVAFYPAEPEHQKFELKRNPF 599 ++ A+FA+G FW E +F L GV T GY GG NP +R + GD HAE+V++ YDP VI++ QLL+VFW +HD Q QG D G QYRS I+ E+ A S ER Q ++ +TT+I FY AE +HQ++ L +NP+ Sbjct: 43 MEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYDPSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAMLAADDDRHITTEIANATPFYYAEDDHQQY-LHKNPY 196
BLAST of FC921297 vs. ExPASy Swiss-Prot
Match: MSRA_SHIBS (Peptide methionine sulfoxide reductase msrA OS=Shigella boydii serotype 4 (strain Sb227) GN=msrA PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.618e-25 Identity = 66/155 (42.58%), Postives = 91/155 (58.71%), Query Frame = 3 Query: 159 LKAAVFALGSFWSSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYDPRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSKSS----IVTTQIQQLVAFYPAEPEHQKFELKRNPF 599 ++ A+FA+G FW E +F L GV T GY GG NP +R + GD HAE+V++ YDP VI++ QLL+VFW +HD Q QG D G QYRS I+ E+ A S ER Q ++ +TT+I FY AE +HQ++ L +NP+ Sbjct: 43 MEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYDPSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAMLAADDDRHITTEIANATPFYYAEDDHQQY-LHKNPY 196
BLAST of FC921297 vs. ExPASy Swiss-Prot
Match: MSRA_SALTY (Peptide methionine sulfoxide reductase msrA OS=Salmonella typhimurium GN=msrA PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.618e-25 Identity = 65/155 (41.94%), Postives = 90/155 (58.06%), Query Frame = 3 Query: 159 LKAAVFALGSFWSSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGD----HAESVQVEYDPRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSKSS----IVTTQIQQLVAFYPAEPEHQKFELKRNPF 599 ++ A FA+G FW E +F L GV T GYAGG NP +R + HAE+V++ YDP VI++ QLL+ FW +HD Q QG D G QYRS I+ E++ A S+ER Q ++ +TT+I FY AE EHQ++ L +NP+ Sbjct: 43 MEIAYFAMGCFWGVERLFWQLPGVYSTAAGYAGGYTPNPTYREVCSGQTGHAEAVRIVYDPAVISYEQLLQTFWENHDPTQGMQQGNDHGTQYRSAIYPLTPEQNAAAHASRERFQSAMTAAGDHRPITTEIAHATPFYYAEDEHQQY-LHKNPY 196
BLAST of FC921297 vs. ExPASy Swiss-Prot
Match: MSRA_SALNS (Peptide methionine sulfoxide reductase msrA OS=Salmonella newport (strain SL254) GN=msrA PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.618e-25 Identity = 65/155 (41.94%), Postives = 90/155 (58.06%), Query Frame = 3 Query: 159 LKAAVFALGSFWSSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGD----HAESVQVEYDPRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSKSS----IVTTQIQQLVAFYPAEPEHQKFELKRNPF 599 ++ A FA+G FW E +F L GV T GYAGG NP +R + HAE+V++ YDP VI++ QLL+ FW +HD Q QG D G QYRS I+ E++ A S+ER Q ++ +TT+I FY AE EHQ++ L +NP+ Sbjct: 43 MEIAYFAMGCFWGVERLFWQLPGVYSTAAGYAGGYTPNPTYREVCSGQTGHAEAVRIVYDPAVISYEQLLQTFWENHDPTQGMQQGNDHGTQYRSAIYPLTPEQNAAAHASRERFQSAMTAAGDHRPITTEIAHATPFYYAEDEHQQY-LHKNPY 196
BLAST of FC921297 vs. ExPASy Swiss-Prot
Match: MSRA_ECOSM (Peptide methionine sulfoxide reductase msrA OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=msrA PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.618e-25 Identity = 66/155 (42.58%), Postives = 91/155 (58.71%), Query Frame = 3 Query: 159 LKAAVFALGSFWSSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYDPRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSKSS----IVTTQIQQLVAFYPAEPEHQKFELKRNPF 599 ++ A+FA+G FW E +F L GV T GY GG NP +R + GD HAE+V++ YDP VI++ QLL+VFW +HD Q QG D G QYRS I+ E+ A S ER Q ++ +TT+I FY AE +HQ++ L +NP+ Sbjct: 43 MEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYDPSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAMLAADDDRRITTEIANATPFYYAEDDHQQY-LHKNPY 196 The following BLAST results are available for this feature:
BLAST of FC921297 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 306
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921297 ID=FC921297; Name=FC921297; organism=Citrus clementina; type=EST; length=713bpback to top |