FC921297
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921297 vs. ExPASy Swiss-Prot
Match: MSRA_PSEAB (Peptide methionine sulfoxide reductase msrA OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=msrA PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 8.312e-22 Identity = 65/164 (39.63%), Postives = 87/164 (53.05%), Query Frame = 3 Query: 150 GRPLKA--------AVFALGSFWSSEAVFGCLNGVVRTTVGYAGGSKTNPEF----RNLGDHAESVQVEYDPRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKER---EQMKSKSSIVTTQIQQLVAFYPAEPEHQKFELKRNP 596 GRPL A +F +G FW +E GV T VGYAGG NP + L H+E V V Y+P+ +F QLL+VFW +HD Q QG D+G QYRS+I+T + A S+E E K+ +TT+I + FY AE HQ++ L +NP Sbjct: 38 GRPLTAPFPAGLQQVLFGMGCFWGAERRLWQQPGVWVTAVGYAGGYTPNPTYDEVCSGLTGHSEVVLVVYNPQETSFEQLLKVFWEAHDPTQGMRQGGDIGTQYRSVIYTFDAAQKAAAMASRENFQAELAKAGYDRITTEIADVPPFYYAEAYHQQY-LAKNP 200
BLAST of FC921297 vs. ExPASy Swiss-Prot
Match: MSRA_PSEAE (Peptide methionine sulfoxide reductase msrA OS=Pseudomonas aeruginosa GN=msrA PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.086e-21 Identity = 65/164 (39.63%), Postives = 87/164 (53.05%), Query Frame = 3 Query: 150 GRPLKA--------AVFALGSFWSSEAVFGCLNGVVRTTVGYAGGSKTNPEF----RNLGDHAESVQVEYDPRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKE---REQMKSKSSIVTTQIQQLVAFYPAEPEHQKFELKRNP 596 GRPL A +F +G FW +E GV T VGYAGG NP + L H+E V V Y+P+ +F QLL+VFW +HD Q QG D+G QYRS+I+T + A S+E E K+ +TT+I + FY AE HQ++ L +NP Sbjct: 38 GRPLTAPFPAGLQQVLFGMGCFWGAERRLWQQPGVWVTAVGYAGGYTPNPTYDEVCSGLTGHSEVVLVVYNPQETSFEQLLKVFWEAHDPTQGMRQGGDIGTQYRSVIYTFDAAQKAAAMASRESFQAELAKAGYDRITTEIADVPPFYYAEAYHQQY-LAKNP 200
BLAST of FC921297 vs. ExPASy Swiss-Prot
Match: MSRA_PSEA8 (Peptide methionine sulfoxide reductase msrA OS=Pseudomonas aeruginosa (strain LESB58) GN=msrA PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.086e-21 Identity = 65/164 (39.63%), Postives = 87/164 (53.05%), Query Frame = 3 Query: 150 GRPLKA--------AVFALGSFWSSEAVFGCLNGVVRTTVGYAGGSKTNPEF----RNLGDHAESVQVEYDPRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKE---REQMKSKSSIVTTQIQQLVAFYPAEPEHQKFELKRNP 596 GRPL A +F +G FW +E GV T VGYAGG NP + L H+E V V Y+P+ +F QLL+VFW +HD Q QG D+G QYRS+I+T + A S+E E K+ +TT+I + FY AE HQ++ L +NP Sbjct: 38 GRPLTAPFPAGLQQVLFGMGCFWGAERRLWQQPGVWVTAVGYAGGYTPNPTYDEVCSGLTGHSEVVLVVYNPQETSFEQLLKVFWEAHDPTQGMRQGGDIGTQYRSVIYTFDAAQKAAALASRESFQAELAKAGYDRITTEIADVPPFYYAEAYHQQY-LAKNP 200
BLAST of FC921297 vs. ExPASy Swiss-Prot
Match: MSRA_PHOLL (Peptide methionine sulfoxide reductase msrA OS=Photorhabdus luminescens subsp. laumondii GN=msrA PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.086e-21 Identity = 57/154 (37.01%), Postives = 87/154 (56.49%), Query Frame = 3 Query: 159 LKAAVFALGSFWSSEAVFGCLNGVVRTTVGYAGGSKTNPEFRN----LGDHAESVQVEYDPRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKER----EQMKSKSSIVTTQIQQLVAFYPAEPEHQKFELKRNP 596 ++ A F +G FW E +F + T+ GY+GG+ NP + L HAE V++ YDP ++ LL++FW +HD Q QG D+G+QYRS I+T ++ LA S+E Q +S + +TT+I + FY AE HQ++ L +NP Sbjct: 44 MEVAYFGMGCFWGVERLFWQQPDIYTTSAGYSGGTTANPTYEEICSGLTGHAEVVRIVYDPAKNSYENLLKLFWENHDPAQGMRQGGDIGSQYRSAIYTVSPQQHELALASREHFQKAMQQQSDNRPITTEITEAGPFYFAEDYHQQY-LFKNP 196
BLAST of FC921297 vs. ExPASy Swiss-Prot
Match: MSRA_NITWN (Peptide methionine sulfoxide reductase msrA OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=msrA PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.086e-21 Identity = 59/144 (40.97%), Postives = 80/144 (55.56%), Query Frame = 3 Query: 168 AVFALGSFWSSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHS-KEREQMKSKSSIVTTQIQQLVAFYPAEPEHQKFELKRNP 596 AV A G FW +A+ GV+ T VGY GG + +RN GDHAE+++V +DP V ++RQLLE F+ HD QG D G YRS IF E+ R+A + E + V T ++ F+ AEPEHQ + L+R P Sbjct: 8 AVLAGGCFWGMQALLRRYPGVISTRVGYTGGDVPDATYRNHGDHAEAIEVNFDPTVTSYRQLLEFFFQIHDPTTEDRQGYDQGLSYRSAIFYTNEEQKRIAEETIAEIDASGLWPGYVVTDVEPAGPFWEAEPEHQDY-LERVP 150
BLAST of FC921297 vs. ExPASy Swiss-Prot
Match: MSRA_METHJ (Peptide methionine sulfoxide reductase msrA OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=msrA PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.086e-21 Identity = 57/145 (39.31%), Postives = 81/145 (55.86%), Query Frame = 3 Query: 168 AVFALGSFWSSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGD----HAESVQVEYDPRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLA-AHSKEREQMKSKSSIVTTQIQQLVAFYPAEPEHQKFELK 587 A FA G FW EA F + GV+ T VGY GG P ++ + HAE++ +EYD I +R+LLE+F++ H+ +V QGPDVG+QYRS+IF E+ A E Q + + T++ F+PAE HQ + LK Sbjct: 4 AFFAGGCFWGIEAGFQKVPGVINTKVGYMGGHTIEPTYQEVCSDTTGHAETIALEYDDTAITYRKLLEIFFSLHNPTEVNRQGPDVGSQYRSVIFYTSPEQKEEAEMFIAEMNQSGRYHAAIATEVVPAETFWPAEEYHQSYFLK 148
BLAST of FC921297 vs. ExPASy Swiss-Prot
Match: MSRA_ACIBY (Peptide methionine sulfoxide reductase msrA OS=Acinetobacter baumannii (strain AYE) GN=msrA PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.086e-21 Identity = 56/150 (37.33%), Postives = 88/150 (58.67%), Query Frame = 3 Query: 159 LKAAVFALGSFWSSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYDPRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSKSSIVTTQIQQLVAFYPAEPEHQKFELKRNP 596 ++ A+F G FW EAVF + GV + T GYAGG T+P + + GD HAE V +++D + + + QLL+VF+ +HD + QG D+G QYRS+I+ E+ + A H+ + +K + T++ FYPAE HQ + ++NP Sbjct: 1 MQQALFGGGCFWCVEAVFLQIRGVEKVTSGYAGGHTTHPTYEQVCQGDTQHAEVVLIDFDEQQVTYSQLLDVFFATHDPTTLNRQGNDIGTQYRSVIYYFNEEQKQAAEHT--IQTLKDDDLDIVTELSPAPTFYPAEDYHQNY-YEKNP 147
BLAST of FC921297 vs. ExPASy Swiss-Prot
Match: MSRA_ACIBT (Peptide methionine sulfoxide reductase msrA OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=msrA PE=3 SV=2) HSP 1 Score: 103.605 bits (257), Expect = 1.086e-21 Identity = 56/150 (37.33%), Postives = 88/150 (58.67%), Query Frame = 3 Query: 159 LKAAVFALGSFWSSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYDPRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSKSSIVTTQIQQLVAFYPAEPEHQKFELKRNP 596 ++ A+F G FW EAVF + GV + T GYAGG T+P + + GD HAE V +++D + + + QLL+VF+ +HD + QG D+G QYRS+I+ E+ + A H+ + +K + T++ FYPAE HQ + ++NP Sbjct: 1 MQQALFGGGCFWCVEAVFLQIRGVEKVTSGYAGGHTTHPTYEQVCQGDTQHAEVVLIDFDEQQVTYSQLLDVFFATHDPTTLNRQGNDIGTQYRSVIYYFNEEQKQAAEHT--IQTLKDDDLDIVTELSPTPTFYPAEDYHQNY-YEKNP 147
BLAST of FC921297 vs. ExPASy Swiss-Prot
Match: MSRA_ACIBS (Peptide methionine sulfoxide reductase msrA OS=Acinetobacter baumannii (strain SDF) GN=msrA PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.086e-21 Identity = 56/150 (37.33%), Postives = 88/150 (58.67%), Query Frame = 3 Query: 159 LKAAVFALGSFWSSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYDPRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSKSSIVTTQIQQLVAFYPAEPEHQKFELKRNP 596 ++ A+F G FW EAVF + GV + T GYAGG T+P + + GD HAE V +++D + + + QLL+VF+ +HD + QG D+G QYRS+I+ E+ + A H+ + +K + T++ FYPAE HQ + ++NP Sbjct: 1 MQQALFGGGCFWCVEAVFLQIRGVEKVTSGYAGGHTTHPTYEQVCQGDTQHAEVVLIDFDEQQVTYSQLLDVFFATHDPTTLNRQGNDIGTQYRSVIYYFNEEQKQAAEHT--IQTLKDDDLDIVTELSPAPTFYPAEDYHQNY-YEKNP 147
BLAST of FC921297 vs. ExPASy Swiss-Prot
Match: MSRA_ACIBC (Peptide methionine sulfoxide reductase msrA OS=Acinetobacter baumannii (strain ACICU) GN=msrA PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.086e-21 Identity = 56/150 (37.33%), Postives = 88/150 (58.67%), Query Frame = 3 Query: 159 LKAAVFALGSFWSSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYDPRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSKSSIVTTQIQQLVAFYPAEPEHQKFELKRNP 596 ++ A+F G FW EAVF + GV + T GYAGG T+P + + GD HAE V +++D + + + QLL+VF+ +HD + QG D+G QYRS+I+ E+ + A H+ + +K + T++ FYPAE HQ + ++NP Sbjct: 1 MQQALFGGGCFWCVEAVFLQIRGVEKVTSGYAGGHTTHPTYEQVCQGDTQHAEVVLIDFDEQQVTYSQLLDVFFATHDPTTLNRQGNDIGTQYRSVIYYFNEEQKQAAEHT--IQTLKDDDLDIVTELSPAPTFYPAEDYHQNY-YEKNP 147 The following BLAST results are available for this feature:
BLAST of FC921297 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 306
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921297 ID=FC921297; Name=FC921297; organism=Citrus clementina; type=EST; length=713bpback to top |