FC921297
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921297 vs. ExPASy Swiss-Prot
Match: MSRA_UREP2 (Peptide methionine sulfoxide reductase msrA OS=Ureaplasma parvum serovar 3 (strain ATCC 27815 / 27 / NCTC 11736) GN=msrA PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.053e-13 Identity = 47/150 (31.33%), Postives = 80/150 (53.33%), Query Frame = 3 Query: 159 LKAAVFALGSFWSSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL----GDHAESVQVEYDPRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSKSSIVTTQIQQLVAFYPAEPEHQKFELKRNP 596 +K+ A G FW + F + GV T VGY+ G+ NP + + +H E+VQ++YD R ++ +LE + D + QG DVG+QYRS I+ ++ + ++Q ++ I+ ++++L F AE HQK+ L +NP Sbjct: 2 IKSIWIAGGCFWGIQKYFDSIIGVNHTVVGYSQGNVINPSYEQVCTQTTNHTETVQIDYDDRFVSLISILEHLYQIIDPFSLNKQGDDVGSQYRSGIYYVDHDDEFIIKDFLLKKQNQTPKKIM-IEVERLRNFNIAEEYHQKY-LDKNP 149
BLAST of FC921297 vs. ExPASy Swiss-Prot
Match: MSRA_MYCGE (Peptide methionine sulfoxide reductase msrA OS=Mycoplasma genitalium GN=msrA PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.571e-12 Identity = 45/150 (30.00%), Postives = 78/150 (52.00%), Query Frame = 3 Query: 159 LKAAVFALGSFWSSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL----GDHAESVQVEYDPRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSKSSIVTTQIQQLVAFYPAEPEHQKFELKRNP 596 +K F G FW E F + GV +T+VGY NP + + + E+V+VEY+ + I+ +L+E + D QG D+G QYR+ I+ + + ++ + K + K+ S + T+ +++ +Y AE HQ + LK+NP Sbjct: 1 MKEIYFGGGCFWGIEKYFQLIKGVKKTSVGYLNSRIRNPSYEQVCSGYTNAVEAVKVEYEEKEISLSELIEALFEVIDPTIRNRQGNDIGTQYRTGIYWTDSSDEKI-INDKFLKLQKNYSKPIVTENKKVENYYLAEEYHQDY-LKKNP 148
BLAST of FC921297 vs. ExPASy Swiss-Prot
Match: MSRA2_CAUCR (Peptide methionine sulfoxide reductase msrA 2 OS=Caulobacter crescentus GN=msrA2 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.571e-12 Identity = 49/148 (33.11%), Postives = 71/148 (47.97%), Query Frame = 3 Query: 162 KAAVFALGSFWSSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL----GDHAESVQVEYDPRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSKSSIVTTQIQQLVAFYPAEPEHQKFELKRN 593 + AVFA G FW E + GV++ GY GG NP +R++ H E+V+V YDP +++ LL +W D GQ D G YR +F + +A S+ + K+ + TQI FY AE H+ + KRN Sbjct: 28 ETAVFAGGCFWCMEHDMQGVPGVLKVESGYTGGHLKNPTYRDVTSETSGHYEAVRVTYDPAKLDYGFLLYRYWRLVDPTDDGGQFCDRGPSYRPAVFVTPAQRP-IAEKSRTEAAKRLKTGTMKTQILPAQTFYLAEEYHRDY-AKRN 173
BLAST of FC921297 vs. ExPASy Swiss-Prot
Match: MSRAB_HAEIN (Peptide methionine sulfoxide reductase msrA/msrB OS=Haemophilus influenzae GN=msrAB PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.052e-12 Identity = 50/148 (33.78%), Postives = 75/148 (50.68%), Query Frame = 3 Query: 159 LKAAVFALGSFWSSEAVFGCLNGVVRTTVGYAGGS--KTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSKSSIVTTQIQQLVAFYPAEPEHQKFELKRNP 596 ++ A G FW EA ++GV GYA G+ KT+ + L DHAE+V+V YD I+ +LL+ ++ D V QG D G QYR+ I+ + + + + Q K K V ++Q L + AE HQ + LK+NP Sbjct: 42 IREIYLAGGCFWGMEAYMERIHGVKDAISGYANGNTEKTSYQMIGLTDHAETVKVTYDANQISLDKLLKYYFKVIDPTSVNKQGNDRGRQYRTGIYYQDGADKAVIGQALAQLQTKYKKP-VQIEVQPLKNYIVAEEYHQDY-LKKNP 187
BLAST of FC921297 vs. ExPASy Swiss-Prot
Match: MSRA_MYCPN (Peptide methionine sulfoxide reductase msrA OS=Mycoplasma pneumoniae GN=msrA PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.571e-12 Identity = 43/150 (28.67%), Postives = 76/150 (50.67%), Query Frame = 3 Query: 159 LKAAVFALGSFWSSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL----GDHAESVQVEYDPRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSKSSIVTTQIQQLVAFYPAEPEHQKFELKRNP 596 +K F G FW ++ F + GV +T+VGY + NP + + + E+V VEYD ++ +L++ F+ D QG D+G QYR+ ++ ++ +L K RE + + T+ + + ++ AE HQ + LK+NP Sbjct: 1 MKQIYFGGGCFWGTQKYFDLIKGVQKTSVGYLNSNMKNPTYEQVCSGQTNAVEAVFVEYDENKVSLNELIDAFFKVIDPTIRNRQGNDIGTQYRTGVYWVDPQDEQLIT-QKFRELQANYPKPIVTENRAMENYFLAEEYHQDY-LKKNP 148
BLAST of FC921297 vs. ExPASy Swiss-Prot
Match: MSRAB_AGGAC (Peptide methionine sulfoxide reductase msrA/msrB OS=Aggregatibacter actinomycetemcomitans GN=msrAB PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.018e-11 Identity = 49/153 (32.03%), Postives = 73/153 (47.71%), Query Frame = 3 Query: 144 ELGRPLKAAVFALGSFWSSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLG--DHAESVQVEYDPRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSKSSIVTTQIQQLVAFYPAEPEHQKFELKRNP 596 E + L A G FW EA + GV GYA G ++ +G DHAE+V+V YD ++ +LL+ ++ D V QG D G QYR+ I+ T + + Q K K+ I +++ L + AE HQ + LK+NP Sbjct: 40 EAKKDLHEIYLAGGCFWGIEAYMERIYGVEDAISGYANGKSDKTNYQKIGITDHAETVKVTYDRNKVSLDKLLKYYFQVIDPTSVNKQGNDRGRQYRTGIYYQDTADKSIIEKEITALQGKYKNKI-QIEVEPLHNYIVAEEYHQDY-LKKNP 190 The following BLAST results are available for this feature:
BLAST of FC921297 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 306
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921297 ID=FC921297; Name=FC921297; organism=Citrus clementina; type=EST; length=713bpback to top |