FC921297
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921297 vs. ExPASy Swiss-Prot
Match: MSRA_SALDC (Peptide methionine sulfoxide reductase msrA OS=Salmonella dublin (strain CT_02021853) GN=msrA PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.114e-25 Identity = 65/155 (41.94%), Postives = 89/155 (57.42%), Query Frame = 3 Query: 159 LKAAVFALGSFWSSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGD----HAESVQVEYDPRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSKSS----IVTTQIQQLVAFYPAEPEHQKFELKRNPF 599 ++ A FA+G FW E +F L GV T GYAGG NP +R + HAE+V++ YDP VI + QLL+ FW +HD Q QG D G QYRS I+ E++ A S+ER Q ++ +TT+I FY AE EHQ++ L +NP+ Sbjct: 43 MEIAYFAMGCFWGVERLFWQLPGVYSTAAGYAGGYTPNPTYREVCSGQTGHAEAVRIVYDPAVIRYEQLLQTFWENHDPTQGMQQGNDHGTQYRSAIYPLTPEQNAAAHASRERFQSAMAAAGDHRPITTEIAHATPFYYAEDEHQQY-LHKNPY 196
BLAST of FC921297 vs. ExPASy Swiss-Prot
Match: MSRA_SALCH (Peptide methionine sulfoxide reductase msrA OS=Salmonella choleraesuis GN=msrA PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.114e-25 Identity = 65/155 (41.94%), Postives = 89/155 (57.42%), Query Frame = 3 Query: 159 LKAAVFALGSFWSSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGD----HAESVQVEYDPRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSKSS----IVTTQIQQLVAFYPAEPEHQKFELKRNPF 599 ++ A FA+G FW E +F L GV T GYAGG NP +R + HAE+V++ YDP VI + QLL+ FW +HD Q QG D G QYRS I+ E++ A S+ER Q ++ +TT+I FY AE EHQ++ L +NP+ Sbjct: 43 MEIAYFAMGCFWGVERLFWQLPGVYSTAAGYAGGYTPNPTYREVCSGQTGHAEAVRIVYDPAVIRYEQLLQTFWENHDPTQGMQQGNDHGTQYRSAIYPLTPEQNAAAHASRERFQSAMAAAGDHRPITTEIAHATPFYYAEDEHQQY-LHKNPY 196
BLAST of FC921297 vs. ExPASy Swiss-Prot
Match: MSRA_SALA4 (Peptide methionine sulfoxide reductase msrA OS=Salmonella agona (strain SL483) GN=msrA PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.114e-25 Identity = 65/155 (41.94%), Postives = 89/155 (57.42%), Query Frame = 3 Query: 159 LKAAVFALGSFWSSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGD----HAESVQVEYDPRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSKSS----IVTTQIQQLVAFYPAEPEHQKFELKRNPF 599 ++ A FA+G FW E +F L GV T GYAGG NP +R + HAE+V++ YDP VI + QLL+ FW +HD Q QG D G QYRS I+ E++ A S+ER Q ++ +TT+I FY AE EHQ++ L +NP+ Sbjct: 43 MEIAYFAMGCFWGVERLFWQLPGVYSTAAGYAGGYTPNPTYREVCSGQTGHAEAVRIVYDPAVIRYEQLLQTFWENHDPTQGMQQGNDHGTQYRSAIYPLTPEQNAAAHASRERFQAAMAAAGDHRPITTEIAHATPFYYAEDEHQQY-LHKNPY 196
BLAST of FC921297 vs. ExPASy Swiss-Prot
Match: MSRA_METAC (Peptide methionine sulfoxide reductase msrA OS=Methanosarcina acetivorans GN=msrA PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.114e-25 Identity = 64/160 (40.00%), Postives = 91/160 (56.88%), Query Frame = 3 Query: 126 STSVNDELGRPLKAAVFALGSFWSSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL----GDHAESVQVEYDPRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKER-EQMKSKSSIVTTQIQQLVAFYPAEPEHQKFELKR 590 ST + + G L+ A FA G FW E F + GVV T VGY+GG P + + HAE+V+V +DP+V++++ LL+VFW HD QGPDVG QYRS+IF + E+ A SKE E+ + + T+I + FY AE HQ++ K+ Sbjct: 17 STDIFENPGEGLEKATFAAGCFWGIEEAFRQVKGVVATAVGYSGGHFEKPTYEQVCTLDTGHAEAVRVIFDPKVVSYKNLLDVFWKIHDPTTKNRQGPDVGKQYRSVIFYHNEEQKAAALASKEELEKAGVFKNPIVTEIVPVSEFYMAEDYHQQYFEKK 176
BLAST of FC921297 vs. ExPASy Swiss-Prot
Match: MSRA1_ANASP (Peptide methionine sulfoxide reductase msrA 1 OS=Anabaena sp. (strain PCC 7120) GN=msrA1 PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.114e-25 Identity = 58/146 (39.73%), Postives = 87/146 (59.59%), Query Frame = 3 Query: 156 PLKAAVFALGSFWSSEAVFGCLNGVVRTTVGYAGGSKTNPEFRN----LGDHAESVQVEYDPRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSKSSI-VTTQIQQLVAFYPAEPEHQKF 578 P++ A F G FW EA F + GVV T+VGY GG NP + + + HAE VQ+EYDP+++++ LL VFW HD + QGPD G QYRS+IF + +++ A SK + Q+ + + + T+I+ +Y A EHQ++ Sbjct: 11 PMEKATFGAGCFWGVEAAFRKVKGVVSTSVGYMGGHFPNPCYLDVLSRITGHAEVVQIEYDPQLVSYEDLLAVFWDIHDPTTLNRQGPDKGEQYRSVIFFHNEQQAEAAQQSKAKVQVSGRFELDIVTEIKHKSEYYLATEEHQQY 156
BLAST of FC921297 vs. ExPASy Swiss-Prot
Match: MSRA_SALPB (Peptide methionine sulfoxide reductase msrA OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=msrA PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.761e-25 Identity = 65/155 (41.94%), Postives = 90/155 (58.06%), Query Frame = 3 Query: 159 LKAAVFALGSFWSSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGD----HAESVQVEYDPRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSKSS----IVTTQIQQLVAFYPAEPEHQKFELKRNPF 599 ++ A FA+G FW E +F L GV T GYAGG NP +R + HAE+V++ YDP VI++ QLL++FW +HD Q QG D G QYRS I+ E++ A S ER Q ++ +TT+I FY AE EHQ++ L +NP+ Sbjct: 43 MEIAYFAMGCFWGVERLFWQLPGVYSTAAGYAGGYTPNPTYREVCSGQTGHAEAVRIVYDPAVISYEQLLQIFWENHDPTQGMQQGNDHGTQYRSAIYPLTPEQNAAAHASCERFQSAMAAAGDHRPITTEIAHATPFYYAEDEHQQY-LHKNPY 196
BLAST of FC921297 vs. ExPASy Swiss-Prot
Match: MSRA_PECCP (Peptide methionine sulfoxide reductase msrA OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=msrA PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.761e-25 Identity = 63/154 (40.91%), Postives = 93/154 (60.39%), Query Frame = 3 Query: 159 LKAAVFALGSFWSSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL----GDHAESVQVEYDPRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQ--MKSKSSI--VTTQIQQLVAFYPAEPEHQKFELKRNP 596 + A+FA+G FW E +F G+ T GY GG NP +R + DHAE+V+V +DP VI++ QLL++FW +HD Q QG D+G+QYRS I+T E+ + A S +R Q M+ K + ++T+I FY AE +HQ++ L +NP Sbjct: 43 MSVAIFAMGCFWGVERLFWQQPGIYSTAAGYIGGYTPNPTYREVCSGQTDHAEAVRVVFDPAVISYDQLLQLFWENHDPAQGMRQGGDIGSQYRSAIYTLTPEQEQAAQESLQRFQQAMREKGDVRAISTEIVPAGPFYYAEDDHQQY-LYKNP 195
BLAST of FC921297 vs. ExPASy Swiss-Prot
Match: MSRA_ERWCT (Peptide methionine sulfoxide reductase msrA OS=Erwinia carotovora subsp. atroseptica GN=msrA PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.761e-25 Identity = 61/154 (39.61%), Postives = 91/154 (59.09%), Query Frame = 3 Query: 159 LKAAVFALGSFWSSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL----GDHAESVQVEYDPRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQM----KSKSSIVTTQIQQLVAFYPAEPEHQKFELKRNP 596 + A+FA+G FW +E +F G+ T GY GG NP +R + DHAE+V+V +DP I++ QLL++FW +HD Q QG D+G+QYRS I+T E+ + A S +R Q S ++T+I+ FY AE +HQ++ L +NP Sbjct: 43 MSVAIFAMGCFWGAERLFWQQPGIYSTAAGYIGGYTPNPTYREVCSGQTDHAEAVRVVFDPATISYSQLLQLFWENHDPAQGMRQGGDIGSQYRSAIYTLTPEQEQAAQASLQRFQQAMRENSDGRAISTEIEPAGPFYYAEEDHQQY-LHKNP 195
BLAST of FC921297 vs. ExPASy Swiss-Prot
Match: MSRA_DICD3 (Peptide methionine sulfoxide reductase msrA OS=Dickeya dadantii (strain 3937) GN=msrA PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.761e-25 Identity = 63/154 (40.91%), Postives = 91/154 (59.09%), Query Frame = 3 Query: 159 LKAAVFALGSFWSSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL----GDHAESVQVEYDPRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSKSS----IVTTQIQQLVAFYPAEPEHQKFELKRNP 596 ++ A+FA+G FW E +F GV T GY GG NP +R + HAE+V+V +DP V+++ QLL++FW +H+ Q QG D+G QYRS I+T TE+ A S +R Q + + +TT+IQ FY AE EHQ++ L +NP Sbjct: 44 MEVAIFAMGCFWGVERLFWQQPGVYSTASGYCGGYTPNPTYREVCTGKTGHAEAVRVVFDPAVVSYPQLLQLFWENHNPAQGMRQGNDIGTQYRSAIYTLTTEQETAAKESYQRFQQAMRDAGNDHDITTEIQPAGPFYYAEDEHQQY-LHKNP 196
BLAST of FC921297 vs. ExPASy Swiss-Prot
Match: MSRA_METMA (Peptide methionine sulfoxide reductase msrA OS=Methanosarcina mazei GN=msrA PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.709e-25 Identity = 63/159 (39.62%), Postives = 90/159 (56.60%), Query Frame = 3 Query: 129 TSVNDELGRPLKAAVFALGSFWSSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL----GDHAESVQVEYDPRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKER-EQMKSKSSIVTTQIQQLVAFYPAEPEHQKFELKR 590 T + + G L+ A FA G FW E F + GVV T VGY+GG P + + HAE+V+V +DP +++++ LL+VFW HD QGPDVG QYRS+IF + E+ A SKE E+ + + V T+I + FY AE HQ++ K+ Sbjct: 41 TEIFENPGEGLEKATFAAGCFWGIEEAFRQIKGVVATAVGYSGGHFKRPTYEQVCTLDTGHAEAVRVIFDPEIVSYKTLLDVFWKIHDPTTKDRQGPDVGKQYRSVIFYHSDEQKAAALASKEELEKSGAFKNPVVTEIVPVSEFYMAEDYHQQYFEKK 199 The following BLAST results are available for this feature:
BLAST of FC921297 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 306
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921297 ID=FC921297; Name=FC921297; organism=Citrus clementina; type=EST; length=713bpback to top |