FC921297
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921297 vs. ExPASy Swiss-Prot
Match: MSRA_ENT38 (Peptide methionine sulfoxide reductase msrA OS=Enterobacter sp. (strain 638) GN=msrA PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 6.799e-24 Identity = 63/155 (40.65%), Postives = 87/155 (56.13%), Query Frame = 3 Query: 159 LKAAVFALGSFWSSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGD----HAESVQVEYDPRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSKSS----IVTTQIQQLVAFYPAEPEHQKFELKRNPF 599 ++ A+FA+G FW E +F L GV T GY GG NP +R + HAE+V++ YDP V + QLL+VFW +HD Q QG D G QYRS I+ E+ A S R Q +++ VTT+I FY AE +HQ++ L +NP+ Sbjct: 43 MEIALFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGETGHAEAVRIVYDPSVTRYEQLLQVFWENHDPAQGMQQGNDHGTQYRSAIYPLTPEQDAAARASLARFQDAMQAAGDHRTVTTEIANATPFYYAEDDHQQY-LHKNPY 196
BLAST of FC921297 vs. ExPASy Swiss-Prot
Match: MSRA_HALWD (Peptide methionine sulfoxide reductase msrA OS=Haloquadratum walsbyi (strain DSM 16790) GN=msrA PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.160e-23 Identity = 67/166 (40.36%), Postives = 86/166 (51.81%), Query Frame = 3 Query: 183 GSFWSSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL----GDHAESVQVEYDPRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSKSSIVTTQIQQLVAFYPAEPEHQKFELKRNPFLIHLMGNLPQEELEKSNLASKLT 668 G FW +EA L GV T GYAGG NP ++ + DHAE VQ+EYDP I + +LLEVF+ +HD Q+ QGPDVG QYRSII T+ T E R A + + T+I+ L F+ AE HQ + K M P+ E + KLT Sbjct: 10 GCFWCTEAAMKELAGVNTVTSGYAGGDIDNPTYKQVCSGTTDHAEVVQIEYDPTKIEYSELLEVFFATHDPTQLNRQGPDVGTQYRSIILTH-TAEQRATAEAYIEALNDHYDDAIVTEIESLERFWSAEEYHQDYFEKNPSDAYCRMHAQPKVEKVRETFTEKLT 174
BLAST of FC921297 vs. ExPASy Swiss-Prot
Match: MSRA_GEOMG (Peptide methionine sulfoxide reductase msrA OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=msrA PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.160e-23 Identity = 61/149 (40.94%), Postives = 86/149 (57.72%), Query Frame = 3 Query: 159 LKAAVFALGSFWSSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGD----HAESVQVEYDPRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSK-SSIVTTQIQQLVAFYPAEPEHQKFELKR 590 L+ A F G FW EA F ++GVV T GY GG K +P + + HAE V+V YDP +++ +LL +FWT HD Q+ QGPD+G YRS+IF + E+ + A S E+E + S + T+I AF+ AE HQ++ KR Sbjct: 7 LEKATFGAGCFWHVEAEFRRVSGVVATHAGYMGGWKDHPTYEEVCSKETGHAEVVEVVYDPARVSYDELLRIFWTIHDPTQLNRQGPDIGTNYRSVIFFHTPEQEQAARLSMEKEGGSGRYSRPIVTEIASASAFWWAEEYHQQYLEKR 155
BLAST of FC921297 vs. ExPASy Swiss-Prot
Match: MSRA_METBU (Peptide methionine sulfoxide reductase msrA OS=Methanococcoides burtonii (strain DSM 6242) GN=msrA PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.515e-23 Identity = 57/145 (39.31%), Postives = 83/145 (57.24%), Query Frame = 3 Query: 159 LKAAVFALGSFWSSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGD----HAESVQVEYDPRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSK-SSIVTTQIQQLVAFYPAEPEHQKF 578 ++ A FA G FW EA F + GV+ T VGY GG+ +P ++++ HAES+ + +D VI + +LLEV W +HD QGPD G+QYRS IF + + A S+E+ + K S + T+I + F PAE HQK+ Sbjct: 1 MERATFAAGCFWGVEAAFSKVEGVISTKVGYTGGTLKDPTYKDVSTGSTGHAESIDIIFDESVITYGELLEVLWNTHDPTTKDSQGPDHGSQYRSAIFYHDDAQREAALRSREQLERSGKYDSTIKTEIVKASEFSPAEDYHQKY 145
BLAST of FC921297 vs. ExPASy Swiss-Prot
Match: MSRA_METMJ (Peptide methionine sulfoxide reductase msrA OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=msrA PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.978e-23 Identity = 60/151 (39.74%), Postives = 81/151 (53.64%), Query Frame = 3 Query: 153 RPLKAAVFALGSFWSSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL----GDHAESVQVEYDPRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSK-SSIVTTQIQQLVAFYPAEPEHQKFELKR 590 + L+ A F G FW E F + GVV T VG+ GG+ NP + + HAE VQV YDP +++R LL+ FW +HD QGPD+G QYRS+IF + E+ A SKE K + T I+ F+ AE HQ++ KR Sbjct: 5 KSLERATFGAGCFWGVEEAFRRVPGVVETAVGFMGGTVENPTYPEVCTGRTGHAEVVQVTYDPGTVSYRALLDTFWDAHDPTTPNRQGPDIGTQYRSVIFVHTPEQEAEARASKEEMDQSGKFRRPIVTAIEPAGTFWRAEEYHQQYFAKR 155
BLAST of FC921297 vs. ExPASy Swiss-Prot
Match: MSRA_METCA (Peptide methionine sulfoxide reductase msrA OS=Methylococcus capsulatus GN=msrA PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.978e-23 Identity = 63/144 (43.75%), Postives = 81/144 (56.25%), Query Frame = 3 Query: 168 AVFALGSFWSSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL----GDHAESVQVEYDPRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSK---EREQMKSKSSIVTTQIQQLVAFYPAEPEHQKF 578 A F +G FW +E F L GV T VGYAGGS NP + + HAE V V Y+P + F LL+VFWTSHD Q QG DVG QYRS+IF E+ + A S+ ER ++ +TT+I+ FY AE HQ++ Sbjct: 48 AFFGMGCFWGAERRFWTLPGVYSTAVGYAGGSTPNPTYDEVCTGRTGHAEVVLVVYEPDKVGFDALLQVFWTSHDPTQGMRQGNDVGTQYRSVIFATTPEQLQWALVSRDAYERALERAGRGGITTEIRMAPDFYYAESYHQQY 191
BLAST of FC921297 vs. ExPASy Swiss-Prot
Match: MSRA_MOUSE (Peptide methionine sulfoxide reductase OS=Mus musculus GN=Msra PE=1 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.584e-23 Identity = 62/150 (41.33%), Postives = 82/150 (54.67%), Query Frame = 3 Query: 168 AVFALGSFWSSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGD----HAESVQVEYDPRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQ---MKSKSSIVTTQIQQLVAFYPAEPEHQKFELKRNP 596 AVF +G FW +E F L GV T VG+AGG NP ++ + HAE V+V Y P I+F +LL+VFW +HD Q QG D G QYRS ++ + A SKE Q K +TT I++ FY AE HQ++ L +NP Sbjct: 66 AVFGMGCFWGAERKFWVLKGVYSTQVGFAGGHTRNPTYKEVCSEKTGHAEVVRVVYRPEHISFEELLKVFWENHDPTQGMRQGNDFGTQYRSAVYPTSAVQMEAALRSKEEYQKVLSKHNFGPITTDIREGQVFYYAEDYHQQY-LSKNP 214
BLAST of FC921297 vs. ExPASy Swiss-Prot
Match: MSRA_POLSQ (Peptide methionine sulfoxide reductase msrA OS=Polynucleobacter sp. (strain QLW-P1DMWA-1) GN=msrA PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.375e-23 Identity = 57/145 (39.31%), Postives = 85/145 (58.62%), Query Frame = 3 Query: 159 LKAAVFALGSFWSSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL----GDHAESVQVEYDPRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAH-SKEREQMKSKSSIVTTQIQQLVAFYPAEPEHQKF 578 L+ A G FW EAV+ + GV GYAGG++ NP + ++ HAE V +E+DP+V++FR LLE+F+ H+ + QG D G QYRS+I+T+ E++++A +E E K + V TQI+ YPAE HQ + Sbjct: 12 LERATLGGGCFWCLEAVYQQIQGVKSVVSGYAGGARPNPSYESVCTGATGHAEIVDIEFDPKVVSFRDLLEIFFVIHNPTTLNYQGNDHGTQYRSVIYTHSDEQAKIANEVVQELEDSKIYADPVVTQIESAPTIYPAEDYHQNY 156
BLAST of FC921297 vs. ExPASy Swiss-Prot
Match: MSRA_FRASN (Peptide methionine sulfoxide reductase msrA OS=Frankia sp. (strain EAN1pec) GN=msrA PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.375e-23 Identity = 63/165 (38.18%), Postives = 89/165 (53.94%), Query Frame = 3 Query: 114 PDR---VSTSVNDELGRPLKAAVFALGSFWSSEAVFGCLNGVVRTTVGYAGGSKTNPEFRN----LGDHAESVQVEYDPRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSKSS---IVTTQIQQLVAFYPAEPEHQKF 578 PDR + S+ L+ AVF +G FW +E F + GV T VGYAGG NP + L H E+V V +DP ++F +LL VFW +HD Q QG DVG QYRS ++T G +++ A S++ Q ++ +TT+I FY AE HQ++ Sbjct: 28 PDRHTVLGASLLGPFPEGLRTAVFGMGCFWGAERKFWQVPGVYSTAVGYAGGITPNPTYEEACSGLTGHTEAVLVVFDPAKVSFAELLRVFWEAHDPTQGMRQGNDVGTQYRSAVYTTGEDQAAAALASRDAFQRVLTAAGYPEITTEIAPAGPFYYAEEYHQQY 192
BLAST of FC921297 vs. ExPASy Swiss-Prot
Match: MSRA_NAUPA (Peptide methionine sulfoxide reductase msrA OS=Nautilia profundicola (strain ATCC BAA-1463 / DSM 18972 / AmH) GN=msrA PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.407e-23 Identity = 61/167 (36.53%), Postives = 95/167 (56.89%), Query Frame = 3 Query: 168 AVFALGSFWSSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL----GDHAESVQVEYDPRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSKSSIVTTQIQQLVAFYPAEPEHQKFELK--RNPFLIHLMGNLPQEELEKSN 650 AVF G FW +AVF ++GV VGYAGG + NP + + HAE V+++YD +++ +LL++F+ HD Q+ QG DVG QYRSII E+ A K+ E++K + V T+++ L FYPAE HQ + K P+ ++++ ++ L+ N Sbjct: 4 AVFGGGCFWCLDAVFRKVDGVRDVVVGYAGGRRPNPNYEQVCTGVTGHAEVVEIDYDENTVSYDELLDIFFKIHDPTQLNRQGNDVGTQYRSIILYLDEEQKEKAL--KKIEELKKEGLNVVTEVKPLEIFYPAEKYHQNYFAKNPHQPYCMYVVAPKVEKYLKIKN 168 The following BLAST results are available for this feature:
BLAST of FC921297 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 306
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921297 ID=FC921297; Name=FC921297; organism=Citrus clementina; type=EST; length=713bpback to top |