FC921297
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921297 vs. ExPASy Swiss-Prot
Match: MSRA_YERE8 (Peptide methionine sulfoxide reductase msrA OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=msrA PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.756e-23 Identity = 59/154 (38.31%), Postives = 87/154 (56.49%), Query Frame = 3 Query: 159 LKAAVFALGSFWSSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGD----HAESVQVEYDPRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQM----KSKSSIVTTQIQQLVAFYPAEPEHQKFELKRNP 596 ++ A+FA+G FW E +F GV T GY+GG NP + + HAE V+V +DP +I+++QLL++FW +HD Q QG DVG QYRS I+ E+ A S+ Q S +T++I + FY AE +HQ++ L +NP Sbjct: 43 MEVAIFAMGCFWGVERLFWQQPGVYSTAAGYSGGYTPNPTYHEVCSGRTAHAEVVRVVFDPAIISYKQLLQIFWENHDPAQGMRQGGDVGTQYRSAIYVLTPEQETQAQESQALFQQAMTKAGDSRAITSEIAAALPFYYAEDDHQQY-LYKNP 195
BLAST of FC921297 vs. ExPASy Swiss-Prot
Match: MSRA_VIBPA (Peptide methionine sulfoxide reductase msrA OS=Vibrio parahaemolyticus GN=msrA PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.756e-23 Identity = 63/163 (38.65%), Postives = 91/163 (55.83%), Query Frame = 3 Query: 129 TSVNDELGRPLKAAVFALGSFWSSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL----GDHAESVQVEYDPRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSKS---SIVTTQIQQLVAFYPAEPEHQKFELKRNP 596 +S+ L + + +G FW +E +F L+GVV T+VGYAGG NP + + H E V+V +D RVI+ QLL VFW HD Q QG D+G QYRS I+T ++ +A SK + Q ++ S +TT+I +Y AE HQ++ L +NP Sbjct: 32 SSLTAPLAHHQQQILLGMGCFWGAERLFWQLDGVVSTSVGYAGGFTPNPTYEEVCTGKTGHTEVVRVVFDERVISLAQLLAVFWEKHDPTQGMRQGNDLGTQYRSAIYTYSQDQQEIADKSKLQYQQALEAELRSTITTEIVPAGPYYFAETYHQQY-LAKNP 193
BLAST of FC921297 vs. ExPASy Swiss-Prot
Match: MSRA_LEPBJ (Peptide methionine sulfoxide reductase msrA OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=msrA PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.518e-23 Identity = 58/150 (38.67%), Postives = 86/150 (57.33%), Query Frame = 3 Query: 159 LKAAVFALGSFWSSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGD----HAESVQVEYDPRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSKSSIVTTQIQQLVAFYPAEPEHQKFELKRNP 596 ++ A G FW EAV+ + G+ GYA G NP++R++ HAE+VQ+ +D +VI++ ++LE+FW SHD + QG DVG QYRSII + E+ + A S ++ IV TQ++ L FYPAE HQ + + NP Sbjct: 1 MEQATLGGGCFWCLEAVYQMVEGIESVVSGYAAGQTKNPDYRSVCSGTTGHAETVQITFDSKVISYFEILEIFWISHDPTTLNRQGNDVGTQYRSIILYHSPEQKKQAEQSIQKAGEHFSDPIV-TQVEILKEFYPAEDYHQNY-FRTNP 148
BLAST of FC921297 vs. ExPASy Swiss-Prot
Match: MSRA2_SYNY3 (Peptide methionine sulfoxide reductase msrA 2 OS=Synechocystis sp. (strain PCC 6803) GN=msrA2 PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.518e-23 Identity = 64/178 (35.96%), Postives = 102/178 (57.30%), Query Frame = 3 Query: 153 RPLKAAVFALGSFWSSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLG----DHAESVQVEYDPRVINFRQLLEVFWT-SHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLA-AHSKEREQMKSKSSIVTTQIQQLVAFYPAEPEHQKFELKRNPFLIH-LMGNLPQEELEKSNLASKL 665 R + AVFA G FW EA+F + GV GY+GG++ + + DHAES+++ YDP +++ +LL++F++ HD QV QG D G QYRS IF E+ ++A A+ + E+ ++ + T++ AFYPAE HQ F ++RNP + L+ +LP+ + + KL Sbjct: 34 RGTEKAVFAGGCFWGLEAMFEEVRGVKDVQTGYSGGTEATANYARVSGGGTDHAESIEIVYDPAQVSYGELLKIFFSVGHDPTQVNRQGVDQGRQYRSAIFATTPEQKQVAQAYIDQLEESQAFDQAIATEVNDFDAFYPAEDYHQDF-VQRNPAHPYVLVHDLPKLRKFRQQYSDKL 210
BLAST of FC921297 vs. ExPASy Swiss-Prot
Match: MSRA_SALTO (Peptide methionine sulfoxide reductase msrA OS=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) GN=msrA PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.818e-23 Identity = 64/165 (38.79%), Postives = 87/165 (52.73%), Query Frame = 3 Query: 129 TSVNDELGRPLKA--------AVFALGSFWSSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGD----HAESVQVEYDPRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKER---EQMKSKSSIVTTQIQQLVAFYPAEPEHQKF 578 T ++ LG PL AVF +G FW +E +F L GV+ T+VGYAGG NP + + HAE V V YDP I + LL+VFW +HD Q QG DVG QYRS I+ E+ A S++ ++ +TT+I L +Y AE HQ++ Sbjct: 27 TEPHEVLGTPLTGPFPEGTAVAVFGMGCFWGAERLFWTLPGVLTTSVGYAGGYTPNPSYDEVCSGRTGHAEVVHVRYDPTKITYEDLLKVFWENHDPTQGMRQGNDVGTQYRSAIYPTTDEQLTTARASRDAFAPVVARAGKGEITTEISPLGDYYLAEGYHQQY 191
BLAST of FC921297 vs. ExPASy Swiss-Prot
Match: MSRA_RAT (Peptide methionine sulfoxide reductase OS=Rattus norvegicus GN=Msra PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.818e-23 Identity = 61/150 (40.67%), Postives = 82/150 (54.67%), Query Frame = 3 Query: 168 AVFALGSFWSSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGD----HAESVQVEYDPRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQ---MKSKSSIVTTQIQQLVAFYPAEPEHQKFELKRNP 596 AVF +G FW +E F L GV T VG+AGG NP ++ + HAE V+V Y P ++F +LL+VFW +HD Q QG D G QYRS ++ + A SKE Q K +TT I++ FY AE HQ++ L +NP Sbjct: 66 AVFGMGCFWGAERKFWLLKGVYSTQVGFAGGYTRNPTYKEVCSEKTGHAEVVRVVYRPEHVSFEELLKVFWENHDPTQGMRQGNDCGTQYRSAVYPTSAVQMEAALKSKEEYQKVLSKHGFGPITTDIREGQVFYYAEDYHQQY-LSKNP 214
BLAST of FC921297 vs. ExPASy Swiss-Prot
Match: MSRA_HUMAN (Peptide methionine sulfoxide reductase OS=Homo sapiens GN=MSRA PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.818e-23 Identity = 61/150 (40.67%), Postives = 84/150 (56.00%), Query Frame = 3 Query: 168 AVFALGSFWSSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGD----HAESVQVEYDPRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQ---MKSKSSIVTTQIQQLVAFYPAEPEHQKFELKRNP 596 AVF +G FW +E F L GV T VG+AGG +NP ++ + HAE V+V Y P ++F +LL+VFW +HD Q QG D G QYRS I+ ++ A SKE Q + +TT I++ FY AE HQ++ L +NP Sbjct: 68 AVFGMGCFWGAERKFWVLKGVYSTQVGFAGGYTSNPTYKEVCSEKTGHAEVVRVVYQPEHMSFEELLKVFWENHDPTQGMRQGNDHGTQYRSAIYPTSAKQMEAALSSKENYQKVLSEHGFGPITTDIREGQTFYYAEDYHQQY-LSKNP 216
BLAST of FC921297 vs. ExPASy Swiss-Prot
Match: MSRA_BRUMB (Peptide methionine sulfoxide reductase msrA OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=msrA PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.818e-23 Identity = 61/153 (39.87%), Postives = 83/153 (54.25%), Query Frame = 3 Query: 159 LKAAVFALGSFWSSEAVFGCLNGVVRTTVGYAGGSKTNPEFRN----LGDHAESVQVEYDPRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSKS---SIVTTQIQQLVAFYPAEPEHQKFELKRNP 596 +K +F +G FW +E +F + GV T VGYAGG NP + L HAE V V YDP+V+ +LL +FW HD Q QG D+G YRS+I+T + +A S++ S VTTQI + FY AE HQ++ L +NP Sbjct: 48 MKQVLFGMGCFWGAERLFWQVPGVYVTAVGYAGGITPNPTYEETCTGLTGHAEVVLVVYDPKVVTLNELLALFWEEHDPTQGMRQGNDIGTTYRSVIYTFNAVDRAVAEKSRDAYSQALASRGLGPVTTQITEAPDFYYAEDYHQQY-LAKNP 199
BLAST of FC921297 vs. ExPASy Swiss-Prot
Match: MSRA_BRUSU (Peptide methionine sulfoxide reductase msrA OS=Brucella suis GN=msrA PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.675e-22 Identity = 61/153 (39.87%), Postives = 82/153 (53.59%), Query Frame = 3 Query: 159 LKAAVFALGSFWSSEAVFGCLNGVVRTTVGYAGGSKTNPEFRN----LGDHAESVQVEYDPRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSKS---SIVTTQIQQLVAFYPAEPEHQKFELKRNP 596 +K +F +G FW +E +F + GV T VGYAGG NP + L HAE V V YDP+V+ +LL +FW HD Q QG D+G YRS+I+T + +A S++ S VTTQI FY AE HQ++ L +NP Sbjct: 48 MKQVLFGMGCFWGAERLFWQVPGVYVTAVGYAGGITPNPTYEETCTGLTGHAEVVLVVYDPKVVTLNELLALFWEEHDPTQGMRQGNDIGTTYRSVIYTFNAVDRAVAEKSRDAYSQALASRGLGPVTTQIADAPDFYYAEDYHQQY-LAKNP 199
BLAST of FC921297 vs. ExPASy Swiss-Prot
Match: MSRA_BRUSI (Peptide methionine sulfoxide reductase msrA OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=msrA PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.675e-22 Identity = 61/153 (39.87%), Postives = 82/153 (53.59%), Query Frame = 3 Query: 159 LKAAVFALGSFWSSEAVFGCLNGVVRTTVGYAGGSKTNPEFRN----LGDHAESVQVEYDPRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYRSIIFTNGTEESRLAAHSKEREQMKSKS---SIVTTQIQQLVAFYPAEPEHQKFELKRNP 596 +K +F +G FW +E +F + GV T VGYAGG NP + L HAE V V YDP+V+ +LL +FW HD Q QG D+G YRS+I+T + +A S++ S VTTQI FY AE HQ++ L +NP Sbjct: 48 MKQVLFGMGCFWGAERLFWQVPGVYVTAVGYAGGITPNPTYEETCTGLTGHAEVVLVVYDPKVVTLNELLALFWEEHDPTQGMRQGNDIGTTYRSVIYTFNAVDRAVAEKSRDAYSQALASRGLGPVTTQIADAPDFYYAEDYHQQY-LAKNP 199 The following BLAST results are available for this feature:
BLAST of FC921297 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 306
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921297 ID=FC921297; Name=FC921297; organism=Citrus clementina; type=EST; length=713bpback to top |