FC921303
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921303 vs. ExPASy Swiss-Prot
Match: GLNA_VIGAC (Glutamine synthetase nodule isozyme OS=Vigna aconitifolia PE=2 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 4.310e-62 Identity = 102/134 (76.12%), Postives = 120/134 (89.55%), Query Frame = 3 Query: 285 LEDLLNLDITPYTDKIIAEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQQ 686 L DL+NL+++ T+KIIAEYIWIGG+G+D+RSK++T+ PV PS+LPKWNYDGSSTGQAPGEDSEVI+YPQAIFKDPFR GNNILV+CD YTPAGEPIPTNKRH AA+IFS+ V AE PW+GIEQEYTLLQ+ Sbjct: 4 LSDLINLNLSDTTEKIIAEYIWIGGSGLDLRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGEDSEVIIYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHNAAKIFSHPDVVAEEPWYGIEQEYTLLQK 137 HSP 2 Score: 35.039 bits (79), Expect = 4.310e-62 Identity = 12/19 (63.16%), Postives = 14/19 (73.68%), Query Frame = 2 Query: 674 LTSTNVKWPLGWPVGAYPG 730 L +V WPLGWPVG +PG Sbjct: 134 LLQKDVNWPLGWPVGGFPG 152
BLAST of FC921303 vs. ExPASy Swiss-Prot
Match: GLNA1_ALNGL (Glutamine synthetase OS=Alnus glutinosa GN=GLN1 PE=2 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 4.310e-62 Identity = 101/134 (75.37%), Postives = 119/134 (88.81%), Query Frame = 3 Query: 285 LEDLLNLDITPYTDKIIAEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQQ 686 L DL+NL+++ TDK+IAEYIWIGG+G D+RSK++T++ PV HPS+LPKWNYDGSSTGQAPGEDSEVI + FKDPFR GNNILVICDTYTPAGEPIPTNKRH AA+IFS+ +V AEVPW+GIEQEYTLLQ+ Sbjct: 4 LSDLINLNLSDATDKVIAEYIWIGGSGTDLRSKARTLTGPVNHPSKLPKWNYDGSSTGQAPGEDSEVIYILRQFFKDPFRRGNNILVICDTYTPAGEPIPTNKRHGAAKIFSHPEVVAEVPWYGIEQEYTLLQK 137 HSP 2 Score: 38.5058 bits (88), Expect = 4.310e-62 Identity = 14/19 (73.68%), Postives = 15/19 (78.95%), Query Frame = 2 Query: 674 LTSTNVKWPLGWPVGAYPG 730 L +VKWPLGWPVG YPG Sbjct: 134 LLQKDVKWPLGWPVGGYPG 152
BLAST of FC921303 vs. ExPASy Swiss-Prot
Match: GLNA_LUPLU (Glutamine synthetase nodule isozyme OS=Lupinus luteus PE=3 SV=1) HSP 1 Score: 224.942 bits (572), Expect = 7.327e-62 Identity = 103/134 (76.87%), Postives = 122/134 (91.04%), Query Frame = 3 Query: 285 LEDLLNLDITPYTDKIIAEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQQ 686 L DL+NL+++ T+KIIAEYIW+GG+G+D+RSK++T+S PV PS+LPKWNYDGSSTGQAPG+DSEVIL+PQAIFKDPFR GNNILV+CDTYTPAGEPIPTNKRH AA+IFS+ V AE PWFGIEQEYTLLQ+ Sbjct: 4 LSDLINLNLSDTTEKIIAEYIWVGGSGVDLRSKARTLSGPVNDPSKLPKWNYDGSSTGQAPGKDSEVILWPQAIFKDPFRRGNNILVMCDTYTPAGEPIPTNKRHAAAKIFSHPDVVAEEPWFGIEQEYTLLQK 137 HSP 2 Score: 32.3426 bits (72), Expect = 7.327e-62 Identity = 9/19 (47.37%), Postives = 14/19 (73.68%), Query Frame = 2 Query: 674 LTSTNVKWPLGWPVGAYPG 730 L ++ WP+GWP+G +PG Sbjct: 134 LLQKDIHWPIGWPLGGFPG 152
BLAST of FC921303 vs. ExPASy Swiss-Prot
Match: GLNA_LACSA (Glutamine synthetase OS=Lactuca sativa PE=2 SV=2) HSP 1 Score: 224.172 bits (570), Expect = 1.246e-61 Identity = 104/134 (77.61%), Postives = 120/134 (89.55%), Query Frame = 3 Query: 285 LEDLLNLDITPYTDKIIAEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQQ 686 L DL+NLD++ TDKIIAEYIWIGG+G+D+RSK++T+S PV PSELPKWNYDGSSTGQAPGEDSEVI+YPQAIFKDPFR GN+ILV+CD YTPAGEPIPTNKR AA+IFSN +V EV W+GIEQEYTLLQ+ Sbjct: 4 LSDLVNLDLSSITDKIIAEYIWIGGSGMDLRSKARTLSGPVSDPSELPKWNYDGSSTGQAPGEDSEVIIYPQAIFKDPFRRGNHILVMCDAYTPAGEPIPTNKRAAAAKIFSNPEVEKEVTWYGIEQEYTLLQK 137 HSP 2 Score: 32.3426 bits (72), Expect = 1.246e-61 Identity = 10/19 (52.63%), Postives = 13/19 (68.42%), Query Frame = 2 Query: 674 LTSTNVKWPLGWPVGAYPG 730 L + WPLGWP+G +PG Sbjct: 134 LLQKDTNWPLGWPLGGFPG 152
BLAST of FC921303 vs. ExPASy Swiss-Prot
Match: GLNA3_MAIZE (Glutamine synthetase root isozyme 3 OS=Zea mays GN=GLN4 PE=1 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 1.246e-61 Identity = 103/134 (76.87%), Postives = 123/134 (91.79%), Query Frame = 3 Query: 285 LEDLLNLDITPYTDKIIAEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQQ 686 L DL+NL+++ T+KIIAEYIWIGG+G+D+RSK++T+S PV PS+LPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFR GNNILV+CD YTPAGEPIPTNKR+ AA+IFS+ +V+AE PW+GIEQEYTLLQ+ Sbjct: 4 LTDLVNLNLSDTTEKIIAEYIWIGGSGMDLRSKARTLSGPVTDPSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDCYTPAGEPIPTNKRYNAAKIFSSPEVAAEEPWYGIEQEYTLLQK 137 HSP 2 Score: 33.113 bits (74), Expect = 1.246e-61 Identity = 10/19 (52.63%), Postives = 13/19 (68.42%), Query Frame = 2 Query: 674 LTSTNVKWPLGWPVGAYPG 730 L + WPLGWP+G +PG Sbjct: 134 LLQKDTNWPLGWPIGGFPG 152
BLAST of FC921303 vs. ExPASy Swiss-Prot
Match: GLNA3_PHAVU (Glutamine synthetase N-1 OS=Phaseolus vulgaris GN=Gln-gamma PE=2 SV=2) HSP 1 Score: 223.016 bits (567), Expect = 1.624e-61 Identity = 99/137 (72.26%), Postives = 124/137 (90.51%), Query Frame = 3 Query: 276 VNRLEDLLNLDITPYTDKIIAEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQQ 686 ++ + DL+NL+++ T+++IAEYIW+GG+G+DMRSK++T+S PV+ PS+LPKWNYDGSSTGQAPG+DSEVILYPQ IF+DPFR GNNILV+CD YTPAGEPIPTNKRH AA+IFSN +V AE PW+GIEQEYTLLQ+ Sbjct: 1 MSSISDLVNLNLSDSTERVIAEYIWVGGSGMDMRSKARTLSGPVKDPSKLPKWNYDGSSTGQAPGQDSEVILYPQTIFRDPFRRGNNILVMCDAYTPAGEPIPTNKRHNAAKIFSNPEVVAEEPWYGIEQEYTLLQK 137 HSP 2 Score: 33.113 bits (74), Expect = 1.624e-61 Identity = 10/19 (52.63%), Postives = 15/19 (78.95%), Query Frame = 2 Query: 674 LTSTNVKWPLGWPVGAYPG 730 L +V+WP+GWP+G +PG Sbjct: 134 LLQKDVQWPVGWPLGGFPG 152
BLAST of FC921303 vs. ExPASy Swiss-Prot
Match: GLN14_ARATH (Glutamine synthetase cytosolic isozyme 1-4 OS=Arabidopsis thaliana GN=GLN1-4 PE=1 SV=1) HSP 1 Score: 220.32 bits (560), Expect = 2.118e-61 Identity = 101/137 (73.72%), Postives = 120/137 (87.59%), Query Frame = 3 Query: 276 VNRLEDLLNLDITPYTDKIIAEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQQ 686 ++ L DL+NLD++ TD+IIAEYIWIGG+G+DMRSK++T+ PV PS+LPKWNYDGSSTGQAPG+DSEVI+YPQAIFKDPFR GNNILV+CD YTPAGEPIPTNKRH AA+IF + V AE W+GIEQEYTLLQ+ Sbjct: 1 MSSLADLINLDLSDSTDQIIAEYIWIGGSGLDMRSKARTLPGPVTDPSQLPKWNYDGSSTGQAPGDDSEVIIYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFEDPSVVAEETWYGIEQEYTLLQK 137 HSP 2 Score: 35.4242 bits (80), Expect = 2.118e-61 Identity = 11/19 (57.89%), Postives = 15/19 (78.95%), Query Frame = 2 Query: 674 LTSTNVKWPLGWPVGAYPG 730 L ++KWP+GWPVG +PG Sbjct: 134 LLQKDIKWPVGWPVGGFPG 152
BLAST of FC921303 vs. ExPASy Swiss-Prot
Match: GLNA2_SOYBN (Glutamine synthetase cytosolic isozyme 2 OS=Glycine max PE=2 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 2.761e-61 Identity = 99/134 (73.88%), Postives = 122/134 (91.04%), Query Frame = 3 Query: 285 LEDLLNLDITPYTDKIIAEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQQ 686 L DL+NL+++ TDK+IAEYIW+GG+G+DMRSK++T+S PV+ PS+LPKWNYDGSSTGQAPG+DSEVILYPQAIFKDPFR G+NILV+CD YTPAGEPIPTNKR+ AA+IF + V+AE PW+G+EQEYTLLQ+ Sbjct: 4 LSDLINLNLSDITDKVIAEYIWVGGSGMDMRSKARTLSGPVKDPSKLPKWNYDGSSTGQAPGQDSEVILYPQAIFKDPFRRGSNILVMCDAYTPAGEPIPTNKRNNAAKIFGHPDVAAEEPWYGLEQEYTLLQK 137 HSP 2 Score: 34.2686 bits (77), Expect = 2.761e-61 Identity = 11/19 (57.89%), Postives = 15/19 (78.95%), Query Frame = 2 Query: 674 LTSTNVKWPLGWPVGAYPG 730 L +V+WPLGWP+G +PG Sbjct: 134 LLQKDVQWPLGWPLGGFPG 152
BLAST of FC921303 vs. ExPASy Swiss-Prot
Match: GLNA3_PEA (Glutamine synthetase root isozyme A OS=Pisum sativum GN=GS3A PE=2 SV=1) HSP 1 Score: 219.164 bits (557), Expect = 3.600e-61 Identity = 99/137 (72.26%), Postives = 122/137 (89.05%), Query Frame = 3 Query: 276 VNRLEDLLNLDITPYTDKIIAEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQQ 686 ++ L DL+N +++ T+KIIAEYIW+GG+GID+RSK++T+ PV P++LPKWNYDGSST QAPG+DSEVILYPQAIFKDPFR GNNILVICD YTPAGEP+PTNKR+ AA+IFS+ V+AEVPW+GIEQEYTLLQ+ Sbjct: 1 MSSLSDLINFNLSDSTEKIIAEYIWVGGSGIDIRSKARTLPGPVSDPAKLPKWNYDGSSTNQAPGKDSEVILYPQAIFKDPFRRGNNILVICDVYTPAGEPLPTNKRYNAAKIFSHPDVAAEVPWYGIEQEYTLLQK 137 HSP 2 Score: 35.8094 bits (81), Expect = 3.600e-61 Identity = 11/19 (57.89%), Postives = 14/19 (73.68%), Query Frame = 2 Query: 674 LTSTNVKWPLGWPVGAYPG 730 L ++ WPLGWP+G YPG Sbjct: 134 LLQKDINWPLGWPIGGYPG 152
BLAST of FC921303 vs. ExPASy Swiss-Prot
Match: GLNA4_PEA (Glutamine synthetase root isozyme B OS=Pisum sativum GN=GS3B PE=3 SV=1) HSP 1 Score: 218.779 bits (556), Expect = 4.694e-61 Identity = 99/137 (72.26%), Postives = 122/137 (89.05%), Query Frame = 3 Query: 276 VNRLEDLLNLDITPYTDKIIAEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQQ 686 ++ L DL+N +++ T+KIIAEYIW+GG+GID+RSK++T+ PV P++LPKWNYDGSST QAPG+DSEVILYPQAIFKDPFR GNNILVICD YTPAGEP+PTNKR+ AA+IFS+ V+AEVPW+GIEQEYTLLQ+ Sbjct: 1 MSSLSDLINFNLSDSTEKIIAEYIWVGGSGIDIRSKARTLPGPVSDPAKLPKWNYDGSSTDQAPGKDSEVILYPQAIFKDPFRRGNNILVICDVYTPAGEPLPTNKRYNAAKIFSHPDVAAEVPWYGIEQEYTLLQK 137 HSP 2 Score: 35.8094 bits (81), Expect = 4.694e-61 Identity = 11/19 (57.89%), Postives = 14/19 (73.68%), Query Frame = 2 Query: 674 LTSTNVKWPLGWPVGAYPG 730 L ++ WPLGWP+G YPG Sbjct: 134 LLQKDINWPLGWPIGGYPG 152 The following BLAST results are available for this feature:
BLAST of FC921303 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 85
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921303 ID=FC921303; Name=FC921303; organism=Citrus clementina; type=EST; length=731bpback to top |