FC921303
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921303 vs. ExPASy Swiss-Prot
Match: GLN15_ARATH (Glutamine synthetase cytosolic isozyme 1-5 OS=Arabidopsis thaliana GN=GLN1-5 PE=2 SV=1) HSP 1 Score: 206.453 bits (524), Expect = 2.282e-57 Identity = 96/134 (71.64%), Postives = 115/134 (85.82%), Query Frame = 3 Query: 285 LEDLLNLDITPYTDKIIAEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQQ 686 L DLLNLD++ T KIIAEYIWIGG+G+D+RSK++T+ PV +P++LPKWNYDGSST QA G+DSEVILYPQAIFKDPFR GNNILV+CD Y PAG+PIPTN RH+A +IF + V AE PWFGIEQEYTLL++ Sbjct: 5 LSDLLNLDLSD-TKKIIAEYIWIGGSGMDIRSKARTLPGPVSNPTKLPKWNYDGSSTDQAAGDDSEVILYPQAIFKDPFRKGNNILVMCDAYRPAGDPIPTNNRHKAVKIFDHPNVKAEEPWFGIEQEYTLLKK 137 HSP 2 Score: 35.8094 bits (81), Expect = 2.282e-57 Identity = 12/19 (63.16%), Postives = 15/19 (78.95%), Query Frame = 2 Query: 674 LTSTNVKWPLGWPVGAYPG 730 L +VKWPLGWP+G +PG Sbjct: 134 LLKKDVKWPLGWPLGGFPG 152
BLAST of FC921303 vs. ExPASy Swiss-Prot
Match: GLNA2_MAIZE (Glutamine synthetase root isozyme 2 OS=Zea mays GN=GLN2 PE=2 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 1.461e-56 Identity = 96/134 (71.64%), Postives = 117/134 (87.31%), Query Frame = 3 Query: 285 LEDLLNLDITPYTDKIIAEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQQ 686 L DL+NLD++ T KIIAEYIW+GG+G+D+RSK++T+S PV+ PS+LPKWN+DGSSTGQAPG+DSEVIL P+AIF+DPFR G NILV+CD Y P GEPIP+NKRH AA+IFS+ V AE PWFGIEQEYTLLQ+ Sbjct: 4 LSDLINLDLSGRTGKIIAEYIWVGGSGMDVRSKARTLSGPVDDPSKLPKWNFDGSSTGQAPGDDSEVILCPRAIFRDPFRKGQNILVMCDCYEPNGEPIPSNKRHGAAKIFSHPDVKAEEPWFGIEQEYTLLQK 137 HSP 2 Score: 30.4166 bits (67), Expect = 1.461e-56 Identity = 12/19 (63.16%), Postives = 14/19 (73.68%), Query Frame = 2 Query: 674 LTSTNVKWPLGWPVGAYPG 730 L + KWPLGWP+ AYPG Sbjct: 134 LLQKDTKWPLGWPL-AYPG 151
BLAST of FC921303 vs. ExPASy Swiss-Prot
Match: GLNA_PINSY (Glutamine synthetase cytosolic isozyme OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 1.728e-54 Identity = 91/134 (67.91%), Postives = 110/134 (82.09%), Query Frame = 3 Query: 285 LEDLLNLDITPYTDKIIAEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQQ 686 L DLLNLD++ T+K+IAEYIWIGG+G+DMRSK++++S PV ELPKWNYDGSSTGQA G DSEVILYPQAIF+DPFR G +ILVICD Y+P G IP+NKR AA+IF+ VS E W+G+EQEYTLLQ+ Sbjct: 5 LTDLLNLDLSDVTEKVIAEYIWIGGSGMDMRSKARSLSGPVSSVKELPKWNYDGSSTGQAQGHDSEVILYPQAIFRDPFRRGKHILVICDAYSPNGTAIPSNKRAAAAKIFNEKAVSDEETWYGLEQEYTLLQK 138 HSP 2 Score: 38.1206 bits (87), Expect = 1.728e-54 Identity = 13/19 (68.42%), Postives = 15/19 (78.95%), Query Frame = 2 Query: 674 LTSTNVKWPLGWPVGAYPG 730 L +VKWPLGWP+G YPG Sbjct: 135 LLQKDVKWPLGWPIGGYPG 153
BLAST of FC921303 vs. ExPASy Swiss-Prot
Match: GLNA1_DAUCA (Glutamine synthetase cytosolic isozyme OS=Daucus carota GN=GLN1 PE=2 SV=1) HSP 1 Score: 207.223 bits (526), Expect = 4.993e-54 Identity = 97/134 (72.39%), Postives = 117/134 (87.31%), Query Frame = 3 Query: 285 LEDLLNLDITPYTDKIIAEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQQ 686 L DL+NLD++ TDK IAEYIWI G +RSK++T+S PV+ P++LPKWN+DGSSTGQ PG+DSEVI+YPQAIFKDPFR GN+ILV+CDTYTPAGEPIPTNKR AA+IFS+ V+AEVPWFGIEQEYTLL++ Sbjct: 4 LTDLINLDLSDTTDKFIAEYIWIDAVG-GLRSKARTLSGPVDDPTKLPKWNFDGSSTGQGPGDDSEVIIYPQAIFKDPFRRGNHILVMCDTYTPAGEPIPTNKRCNAAKIFSHPDVAAEVPWFGIEQEYTLLKK 136 HSP 2 Score: 23.8682 bits (50), Expect = 4.993e-54 Identity = 9/19 (47.37%), Postives = 10/19 (52.63%), Query Frame = 2 Query: 674 LTSTNVKWPLGWPVGAYPG 730 L V P+G P G YPG Sbjct: 133 LLKKEVNCPIGCPTGGYPG 151
BLAST of FC921303 vs. ExPASy Swiss-Prot
Match: GLNA1_CHLRE (Glutamine synthetase cytosolic isozyme OS=Chlamydomonas reinhardtii GN=GLN1 PE=2 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 2.259e-41 Identity = 79/134 (58.96%), Postives = 93/134 (69.40%), Query Frame = 3 Query: 309 ITPYTDKIIAEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTP----------AGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLL 680 +T KI AEY+WIGG+ D+RSKS+T+S P +LP WNYDGSSTGQAPG DSEV L P++IFKDPFRGG+NILV+CD Y P A +PIPTN R AE+ +K E PWFGIEQEYTLL Sbjct: 31 VTDQQGKICAEYVWIGGSMHDVRSKSRTLSTIPTKPEDLPHWNYDGSSTGQAPGHDSEVYLIPRSIFKDPFRGGDNILVMCDCYEPPKVNPDGTLAAPKPIPTNTRFACAEVMEKAK--KEEPWFGIEQEYTLL 162 HSP 2 Score: 31.5722 bits (70), Expect = 2.259e-41 Identity = 11/18 (61.11%), Postives = 12/18 (66.67%), Query Frame = 2 Query: 674 LTSTNVKWPLGWPVGAYP 727 L + KWPLGWP G YP Sbjct: 161 LLNAITKWPLGWPKGGYP 178
BLAST of FC921303 vs. ExPASy Swiss-Prot
Match: GLNA_HEBCY (Glutamine synthetase OS=Hebeloma cylindrosporum GN=GLN1 PE=2 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 1.120e-33 Identity = 69/121 (57.02%), Postives = 85/121 (70.25%), Query Frame = 3 Query: 315 PYTDKIIAEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTL 677 P DKI AEY+W+ G G +RSK+ T+SK V L W++DGSST QAPG DS+V L P AIFKDPFRGG+NILV+ +TY G P TN RH AA++ +K +VPWFG+EQEYTL Sbjct: 17 PQGDKIQAEYVWVDGDG-GLRSKTTTVSKKVTDIGSLRIWDFDGSSTNQAPGHDSDVYLRPAAIFKDPFRGGDNILVLAETYNSDGTPNRTNFRHHAAKVMEQAK--EDVPWFGLEQEYTL 134 HSP 2 Score: 23.8682 bits (50), Expect = 1.120e-33 Identity = 7/11 (63.64%), Postives = 8/11 (72.73%), Query Frame = 2 Query: 698 PLGWPVGAYPG 730 P GWP G +PG Sbjct: 141 PYGWPKGGFPG 151
BLAST of FC921303 vs. ExPASy Swiss-Prot
Match: GLNA2_DROME (Glutamine synthetase 2 cytoplasmic OS=Drosophila melanogaster GN=Gs2 PE=2 SV=3) HSP 1 Score: 138.272 bits (347), Expect = 2.474e-33 Identity = 69/123 (56.10%), Postives = 83/123 (67.48%), Query Frame = 3 Query: 315 PYTDKII-AEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLL 680 P + I+ A Y+WI GTG D+R K +T+ + P ELP WNYDGSS QA G +S+ LYP AI+KDPFR GNNILV+CDTY G P TNKR E+ +K +AE PWFGIEQEYT L Sbjct: 26 PLQENIVQATYVWIDGTGEDLRCKDRTLDFIPQSPKELPVWNYDGSSCYQAEGSNSDTYLYPVAIYKDPFRRGNNILVMCDTYKFDGTPTDTNKRKTCLEV--ANKCAAEEPWFGIEQEYTFL 146 HSP 2 Score: 23.483 bits (49), Expect = 2.474e-33 Identity = 7/11 (63.64%), Postives = 8/11 (72.73%), Query Frame = 2 Query: 698 PLGWPVGAYPG 730 PLGWP +PG Sbjct: 152 PLGWPKNGFPG 162
BLAST of FC921303 vs. ExPASy Swiss-Prot
Match: GLNA_PANAR (Glutamine synthetase OS=Panulirus argus PE=2 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.048e-32 Identity = 66/132 (50.00%), Postives = 92/132 (69.70%), Query Frame = 3 Query: 285 LEDLLNLDITPYTDKIIAEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLL 680 L+ L LDI K A YIW+ GTG ++RSK++T++ + PSELP WN+DGSSTGQA +S+V LYP A+++DPFR GNN LV+C+TY +P TN+R + E+ ++ + + PWFG+EQEYTLL Sbjct: 10 LDRYLRLDIPD--QKCQAMYIWVDGTGENLRSKTRTLNFTPKSPSELPIWNFDGSSTGQAERSNSDVYLYPVAVYRDPFRLGNNKLVLCETYKYNKKPADTNQRWKCMEVM--TRAADQHPWFGMEQEYTLL 137 HSP 2 Score: 26.1794 bits (56), Expect = 2.048e-32 Identity = 9/13 (69.23%), Postives = 9/13 (69.23%), Query Frame = 2 Query: 692 KWPLGWPVGAYPG 730 K PLGWP YPG Sbjct: 141 KHPLGWPKNGYPG 153
BLAST of FC921303 vs. ExPASy Swiss-Prot
Match: GLNA_AGABI (Glutamine synthetase OS=Agaricus bisporus GN=glnA PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 2.668e-32 Identity = 67/118 (56.78%), Postives = 82/118 (69.49%), Query Frame = 3 Query: 324 DKIIAEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTL 677 DKI AEY+WI G G +R K+ T+SK V +L W++DGSST QAPG DS+V L P AIFKDPFRGG+NILV+ +TY G P TN RH A ++F +K PWFG+EQEYTL Sbjct: 20 DKIQAEYVWIDGDG-GLRCKTTTVSKKVTDIGQLRIWDFDGSSTNQAPGHDSDVYLRPAAIFKDPFRGGDNILVLAETYNNDGTPNRTNHRHHAKKVFDEAK--EHEPWFGLEQEYTL 134 HSP 2 Score: 23.8682 bits (50), Expect = 2.668e-32 Identity = 7/11 (63.64%), Postives = 8/11 (72.73%), Query Frame = 2 Query: 698 PLGWPVGAYPG 730 P GWP G +PG Sbjct: 141 PYGWPKGGFPG 151
BLAST of FC921303 vs. ExPASy Swiss-Prot
Match: GLNA_TUBBO (Glutamine synthetase OS=Tuber borchii GN=GLN1 PE=2 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 6.345e-31 Identity = 72/143 (50.35%), Postives = 90/143 (62.94%), Query Frame = 3 Query: 261 SEDSTV----NRLEDLLNLDITPYTDKIIAEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTL 677 SE+ST+ L LNLD I+AEYIWI G +RSK+KT+ K +LP+WN+DGSSTGQAPGEDS++ L P AIF DPFR G+NILV+ + + G P N RH A+I K + PWFG+EQEYTL Sbjct: 2 SENSTIVSNTANLVKFLNLD---QKGSILAEYIWIDGAN-GVRSKTKTLFKKPSSVEDLPEWNFDGSSTGQAPGEDSDIYLRPVAIFPDPFRMGDNILVLAECWNADGSPNKFNHRHECAKIMEAHK--DQKPWFGLEQEYTL 138 HSP 2 Score: 23.8682 bits (50), Expect = 6.345e-31 Identity = 7/11 (63.64%), Postives = 8/11 (72.73%), Query Frame = 2 Query: 698 PLGWPVGAYPG 730 P GWP G +PG Sbjct: 145 PYGWPKGGFPG 155 The following BLAST results are available for this feature:
BLAST of FC921303 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 85
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921303 ID=FC921303; Name=FC921303; organism=Citrus clementina; type=EST; length=731bpback to top |