FC921303
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921303 vs. ExPASy Swiss-Prot
Match: GLNA_CAEEL (Probable glutamine synthetase OS=Caenorhabditis elegans GN=gln-2 PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 1.434e-26 Identity = 59/128 (46.09%), Postives = 79/128 (61.72%), Query Frame = 3 Query: 303 LDITPYTDKIIAEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQQ 686 L + P+ KI A Y+WI GTG ++RSK++T K + + P WNYDGSSTGQA G DS+ L P A + DPF GG N LV+CDT +P T+ R AEI ++ PWFG+EQEY ++ + Sbjct: 21 LGLRPHPTKIQATYVWIDGTGENLRSKTRTFDKLPKRIEDYPIWNYDGSSTGQAKGRDSDRYLRPVAAYPDPFLGGGNKLVMCDTLDHQMQPTATSHRQACAEIM--HEIRDTRPWFGMEQEYLIVDR 146 HSP 2 Score: 20.4014 bits (41), Expect = 1.434e-26 Identity = 6/10 (60.00%), Postives = 7/10 (70.00%), Query Frame = 2 Query: 698 PLGWPVGAYP 727 PLGWP +P Sbjct: 150 PLGWPKHGFP 159
BLAST of FC921303 vs. ExPASy Swiss-Prot
Match: GLNA_DEBHA (Glutamine synthetase OS=Debaryomyces hansenii GN=GLN1 PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.619e-26 Identity = 58/120 (48.33%), Postives = 78/120 (65.00%), Query Frame = 3 Query: 327 KIIAEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQQ 686 K++AEY+WI G + RSK KT+ K +LP+WN+DGSSTGQAPG DS+V L P A + DPFR G+NI+V+ + + G P N RH +A++ + E WFG+EQEYTL Q Sbjct: 22 KVLAEYVWIDADG-NSRSKCKTLDKKPSSVEDLPEWNFDGSSTGQAPGHDSDVYLRPVAFYADPFRKGDNIIVLTECWNNDGTPNKFNHRHESAKLMKAH--ADEEVWFGLEQEYTLFDQ 138
BLAST of FC921303 vs. ExPASy Swiss-Prot
Match: GLNA1_DROME (Glutamine synthetase 1, mitochondrial OS=Drosophila melanogaster GN=Gs1 PE=2 SV=3) HSP 1 Score: 119.013 bits (297), Expect = 2.619e-26 Identity = 63/133 (47.37%), Postives = 90/133 (67.67%), Query Frame = 3 Query: 285 LEDLLNLDITPYTDKIIAEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFR-GGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLL 680 L+ NL+ TP +++ A Y+WI GTG ++R K + + K +LP W YDGSST QA GE+S+ L P+AI++DPF+ G N+++V+CDTY+ G+P +NK RAA + +S + PWFGIEQEYTLL Sbjct: 49 LQRYRNLE-TP-ANRVQATYLWIDGTGENIRLKDRVLDKVPSSVEDLPDWQYDGSSTYQAHGENSDTTLKPRAIYRDPFKPGKNDVIVLCDTYSADGKPTASNK--RAAFQAAIDLISDQEPWFGIEQEYTLL 177
BLAST of FC921303 vs. ExPASy Swiss-Prot
Match: GLNA_SCHPO (Glutamine synthetase OS=Schizosaccharomyces pombe GN=gln1 PE=1 SV=2) HSP 1 Score: 113.62 bits (283), Expect = 3.164e-26 Identity = 63/149 (42.28%), Postives = 89/149 (59.73%), Query Frame = 3 Query: 234 AKFRVLALKSEDSTVNRLEDLLNLDITPYTDKIIAEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLL 680 +++ V L S+ + +N+ DL P K++AEYIWI G +RSK+ T+ +L WN+DGSSTGQAPG +S+ +L P A++ DPFR G+NILV+ YT G P N R A++ K + + WFGIEQEYT+L Sbjct: 2 SQYDVEPLLSKAAILNKYADL------PQNGKVMAEYIWIDGFN-HLRSKTMTLDAKPSSIDQLRVWNFDGSSTGQAPGNNSDTLLKPVAMYNDPFRRGDNILVLAACYTADGSPNGFNHRDACAKLL--EKHADKETWFGIEQEYTML 141 HSP 2 Score: 24.2534 bits (51), Expect = 3.164e-26 Identity = 7/11 (63.64%), Postives = 8/11 (72.73%), Query Frame = 2 Query: 698 PLGWPVGAYPG 730 P GWP G +PG Sbjct: 147 PFGWPKGGFPG 157
BLAST of FC921303 vs. ExPASy Swiss-Prot
Match: GLNA_BOVIN (Glutamine synthetase OS=Bos taurus GN=GLUL PE=2 SV=4) HSP 1 Score: 115.546 bits (288), Expect = 4.117e-26 Identity = 57/122 (46.72%), Postives = 77/122 (63.11%), Query Frame = 3 Query: 315 PYTDKIIAEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLL 680 P DK+ A YIWI GTG +R K++T+ + ELP+WN+DGSST Q+ G +S++ L P A+F+DPFR N LV C+ + +P TN RH I VS + PWFG+EQEYTL+ Sbjct: 21 PQGDKVQAMYIWIDGTGEGLRCKTRTLDSEPKCIEELPEWNFDGSSTFQSEGSNSDMYLVPAAMFRDPFRKDPNKLVFCEVFKYNRKPAETNLRHTCKRIM--DMVSNQRPWFGMEQEYTLM 140 HSP 2 Score: 21.9422 bits (45), Expect = 4.117e-26 Identity = 6/11 (54.55%), Postives = 7/11 (63.64%), Query Frame = 2 Query: 698 PLGWPVGAYPG 730 P GWP +PG Sbjct: 146 PFGWPSNGFPG 156
BLAST of FC921303 vs. ExPASy Swiss-Prot
Match: GLNA_SQUAC (Glutamine synthetase, mitochondrial OS=Squalus acanthias PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 6.967e-26 Identity = 56/122 (45.90%), Postives = 79/122 (64.75%), Query Frame = 3 Query: 315 PYTDKIIAEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLL 680 P K+ A YIWI GTG +R K++T+ + +ELP+WN+DGSST Q+ G +S++ L P A+F+DPFR N LV+C+ +P +N RH +I S ++ E PWFG+EQEYTLL Sbjct: 50 PQDGKVQAMYIWIDGTGEAVRCKTRTLDNEPKSIAELPEWNFDGSSTYQSEGSNSDMYLVPSAMFRDPFRRDPNKLVLCEVLKYNRKPAESNLRHSCQKIM--SMIANEYPWFGMEQEYTLL 169 HSP 2 Score: 21.9422 bits (45), Expect = 6.967e-26 Identity = 6/11 (54.55%), Postives = 7/11 (63.64%), Query Frame = 2 Query: 698 PLGWPVGAYPG 730 P GWP +PG Sbjct: 175 PFGWPSNCFPG 185
BLAST of FC921303 vs. ExPASy Swiss-Prot
Match: GLNA_CANFA (Glutamine synthetase OS=Canis familiaris GN=GLUL PE=1 SV=3) HSP 1 Score: 114.775 bits (286), Expect = 6.974e-26 Identity = 56/122 (45.90%), Postives = 77/122 (63.11%), Query Frame = 3 Query: 315 PYTDKIIAEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLL 680 P +K+ A YIWI GTG +R K++T+ + ELP+WN+DGSST Q+ G +S++ L P A+F+DPFR N LV C+ + +P TN RH I VS + PWFG+EQEYTL+ Sbjct: 21 PQGEKVQAMYIWIDGTGEGLRCKTRTLDSEPKGVEELPEWNFDGSSTFQSEGSNSDMYLVPAAMFRDPFRKDPNKLVFCEVFKYNRKPAETNLRHTCKRIM--DMVSNQHPWFGMEQEYTLM 140 HSP 2 Score: 21.9422 bits (45), Expect = 6.974e-26 Identity = 6/11 (54.55%), Postives = 7/11 (63.64%), Query Frame = 2 Query: 698 PLGWPVGAYPG 730 P GWP +PG Sbjct: 146 PFGWPSNGFPG 156
BLAST of FC921303 vs. ExPASy Swiss-Prot
Match: GLNA_HUMAN (Glutamine synthetase OS=Homo sapiens GN=GLUL PE=1 SV=4) HSP 1 Score: 114.39 bits (285), Expect = 9.077e-26 Identity = 56/122 (45.90%), Postives = 77/122 (63.11%), Query Frame = 3 Query: 315 PYTDKIIAEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLL 680 P +K+ A YIWI GTG +R K++T+ + ELP+WN+DGSST Q+ G +S++ L P A+F+DPFR N LV+C+ + P TN RH I VS + PWFG+EQEYTL+ Sbjct: 21 PQGEKVQAMYIWIDGTGEGLRCKTRTLDSEPKCVEELPEWNFDGSSTLQSEGSNSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYNRRPAETNLRHTCKRIM--DMVSNQHPWFGMEQEYTLM 140 HSP 2 Score: 21.9422 bits (45), Expect = 9.077e-26 Identity = 6/11 (54.55%), Postives = 7/11 (63.64%), Query Frame = 2 Query: 698 PLGWPVGAYPG 730 P GWP +PG Sbjct: 146 PFGWPSNGFPG 156
BLAST of FC921303 vs. ExPASy Swiss-Prot
Match: GLNA_CRYNE (Glutamine synthetase OS=Cryptococcus neoformans GN=GLN1 PE=2 SV=2) HSP 1 Score: 117.087 bits (292), Expect = 9.951e-26 Identity = 58/117 (49.57%), Postives = 78/117 (66.67%), Query Frame = 3 Query: 327 KIIAEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTL 677 ++ AEYIWI G +RSK+ T+ K ++L +WN+DGSST QAP ++S+V L P AIFKDPFRGG NILV+C+ Y G P +N R ++ +K + PWFG+EQEYTL Sbjct: 24 RVQAEYIWIDAEG-GIRSKTMTLDKAPSSVADLKEWNFDGSSTNQAPADNSDVFLRPVAIFKDPFRGGANILVLCECYDNDGTPNKSNYRAHCKKVMDAAKDTE--PWFGLEQEYTL 137
BLAST of FC921303 vs. ExPASy Swiss-Prot
Match: GLNA_PIG (Glutamine synthetase OS=Sus scrofa GN=GLUL PE=2 SV=3) HSP 1 Score: 114.005 bits (284), Expect = 1.181e-25 Identity = 56/122 (45.90%), Postives = 77/122 (63.11%), Query Frame = 3 Query: 315 PYTDKIIAEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLL 680 P +K+ A YIWI GTG +R K++T+ + ELP+WN+DGSST Q+ G +S++ L P A+F+DPFR N LV C+ + +P TN RH I VS + PWFG+EQEYTL+ Sbjct: 21 PQGEKVQAMYIWIDGTGEGLRCKTRTLDSEPKCIEELPEWNFDGSSTFQSEGSNSDMYLVPAAMFRDPFRKDPNKLVFCEVFKYNRKPAETNLRHTCKRIM--DMVSNQHPWFGMEQEYTLM 140 HSP 2 Score: 21.9422 bits (45), Expect = 1.181e-25 Identity = 6/11 (54.55%), Postives = 7/11 (63.64%), Query Frame = 2 Query: 698 PLGWPVGAYPG 730 P GWP +PG Sbjct: 146 PFGWPSNGFPG 156 The following BLAST results are available for this feature:
BLAST of FC921303 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 85
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921303 ID=FC921303; Name=FC921303; organism=Citrus clementina; type=EST; length=731bpback to top |