FC921303
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921303 vs. ExPASy Swiss-Prot
Match: GLNA2_CHLRE (Glutamine synthetase, chloroplastic OS=Chlamydomonas reinhardtii GN=GLN2 PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 5.111e-22 Identity = 57/125 (45.60%), Postives = 77/125 (61.60%), Query Frame = 3 Query: 336 AEYIWIGGT------GI---DMRSKSKTISKPVE-HPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLL 680 AEYIW G G+ +MRSK+K P+ SE P W++DGSSTGQA G +S+ IL P + DP RG ++LV+C+ + P G+P TN R + EI + KV+AE W+G EQEYT+L Sbjct: 37 AEYIWADGNEGKPEKGMIFNEMRSKTKCFEAPLGLDASEYPDWSFDGSSTGQAEGNNSDCILRPVRVVTDPIRGAPHVLVMCEVFAPDGKPHSTNTRAKLREII-DDKVTAEDCWYGFEQEYTML 160
BLAST of FC921303 vs. ExPASy Swiss-Prot
Match: GLNA2_STRVR (Glutamine synthetase 2 OS=Streptomyces viridochromogenes GN=glnII PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 3.165e-18 Identity = 52/118 (44.07%), Postives = 67/118 (56.78%), Query Frame = 3 Query: 336 AEYIWIGGTG--IDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQ 683 AEYIWI GT +RSK+K I+ LP W +DGSST QA G S+ +L P DP RGG++ILV+C+ P +N R AE+ + +A+ P FGIEQEYT Q Sbjct: 5 AEYIWIDGTEPTAKLRSKTKIITGQPAGLDALPIWGFDGSSTNQAEGHSSDCVLKPVFTCPDPIRGGDDILVLCEVLNIDLTPHASNTRAALAEV--AERFAAQEPIFGIEQEYTFFQ 120 HSP 2 Score: 20.4014 bits (41), Expect = 3.165e-18 Identity = 6/11 (54.55%), Postives = 9/11 (81.82%), Query Frame = 2 Query: 695 WPLGWPVGAYP 727 +PLG+P G +P Sbjct: 123 YPLGFPKGGFP 133
BLAST of FC921303 vs. ExPASy Swiss-Prot
Match: GLNA2_STRHY (Glutamine synthetase 2 OS=Streptomyces hygroscopicus GN=glnB PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.701e-17 Identity = 50/118 (42.37%), Postives = 69/118 (58.47%), Query Frame = 3 Query: 330 IIAEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQ 683 I AEYIWI GT + +SKT K + S LP+W +DGSST QA G S+++L P DP RGG+++LV+C+ P P+N R + + + + P FGIEQEYT L+ Sbjct: 3 IKAEYIWIDGTQPTAKLRSKT--KILSDGSRLPRWGFDGSSTNQAEGHASDLVLEPVFSCPDPIRGGDHLLVLCEVLHTDLTPHPSNTRALLRPV--AERFAGQEPIFGIEQEYTFLK 116
BLAST of FC921303 vs. ExPASy Swiss-Prot
Match: GLNA2_FRAAL (Glutamine synthetase 2 OS=Frankia alni GN=glnII PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.219e-15 Identity = 50/116 (43.10%), Postives = 66/116 (56.90%), Query Frame = 3 Query: 336 AEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQ 683 AEYIWI GT + +SKT + ++ E W +DGSST QAPG +S+ +L P DP RGG+N LV+C+ P PTN RAA + + + P FGIEQEYT + Sbjct: 5 AEYIWIDGTEPEPLMRSKT--RIIKDGKEPEIWGFDGSSTNQAPGSNSDCVLRPVFETPDPIRGGDNRLVLCEVQLTDFTP-PTNT--RAAALGVAERYADMSPMFGIEQEYTFFK 115
BLAST of FC921303 vs. ExPASy Swiss-Prot
Match: GLNA2_BRAJA (Glutamine synthetase 2 OS=Bradyrhizobium japonicum GN=glnII PE=3 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 1.822e-11 Identity = 46/115 (40.00%), Postives = 62/115 (53.91%), Query Frame = 3 Query: 339 EYIWIGGTGIDMRSKSKT-ISKPVEHPS--ELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGE-PIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEY 671 EYIW+ G + KT I + P+ +LP W +DGSST QA G S+ +L P A+F D R N +LV+C+ P G+ P +NKR A I ++ WFG EQEY Sbjct: 7 EYIWLDGYTPTPNLRGKTQIKEFASFPTLEQLPLWGFDGSSTQQAEGHSSDCVLKPVAVFPDAAR-TNGVLVMCEVMMPDGKTPHASNKR---ATILDDAGA-----WFGFEQEY 112 The following BLAST results are available for this feature:
BLAST of FC921303 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 85
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921303 ID=FC921303; Name=FC921303; organism=Citrus clementina; type=EST; length=731bpback to top |