FC921306

Overview
NameFC921306
Unique NameFC921306
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length705
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921306 vs. ExPASy Swiss-Prot
Match: ADH_FRAAN (Alcohol dehydrogenase OS=Fragaria ananassa GN=ADH PE=3 SV=2)

HSP 1 Score: 370.933 bits (951), Expect = 3.631e-102
Identity = 174/202 (86.14%), Postives = 188/202 (93.07%), Query Frame = 1
Query:   58 MSGTAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIF 663
            MS T G+VI C+AAVAWEAGKPLVIEEVEVAPPQ N VR+KIL+TSLCHTDVYFWEAKGQ PLFPRI+GHEAGGIVESVGEGVTDL+ GDHVLPVFTGECKEC HC SEESNMCDLLRINTDRGVM+NDG+SRFSIKGKPIYHFVGTSTFS YTVTHVGC+AKINP +PLDKVC+LSCGISTG GAT+NV KPKKG +VA+F
Sbjct:    1 MSSTEGKVICCRAAVAWEAGKPLVIEEVEVAPPQANVVRVKILYTSLCHTDVYFWEAKGQNPLFPRIYGHEAGGIVESVGEGVTDLKAGDHVLPVFTGECKECDHCKSEESNMCDLLRINTDRGVMLNDGKSRFSIKGKPIYHFVGTSTFSVYTVTHVGCLAKINPQSPLDKVCILSCGISTGLGATLNVRKPKKGSTVAVF 202          
BLAST of FC921306 vs. ExPASy Swiss-Prot
Match: ADH2_SOLLC (Alcohol dehydrogenase 2 OS=Solanum lycopersicum GN=ADH2 PE=2 SV=2)

HSP 1 Score: 370.548 bits (950), Expect = 4.742e-102
Identity = 176/202 (87.13%), Postives = 185/202 (91.58%), Query Frame = 1
Query:   58 MSGTAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIF 663
            MS T GQVIRCKAAVAWEAGKPLV+EEV+VAPPQK EVRLKIL+TSLCHTDVYFWEAKGQ P+FPRI GHEA GIVESVGEGVTDL PGDHVLPVFTGECK+C HC SEESNMC LLRINTDRGVM+NDG+SRFSI G PIYHFVGTSTFSEYTV HVGCVAKINP APLDKVCVLSCGISTG GA++NVAKP KG SVAIF
Sbjct:    1 MSTTVGQVIRCKAAVAWEAGKPLVMEEVDVAPPQKMEVRLKILYTSLCHTDVYFWEAKGQNPVFPRILGHEAAGIVESVGEGVTDLAPGDHVLPVFTGECKDCAHCKSEESNMCSLLRINTDRGVMLNDGKSRFSINGNPIYHFVGTSTFSEYTVVHVGCVAKINPLAPLDKVCVLSCGISTGLGASLNVAKPTKGSSVAIF 202          
BLAST of FC921306 vs. ExPASy Swiss-Prot
Match: ADH2_ORYSJ (Alcohol dehydrogenase 2 OS=Oryza sativa subsp. japonica GN=ADH2 PE=2 SV=2)

HSP 1 Score: 370.548 bits (950), Expect = 4.742e-102
Identity = 174/199 (87.44%), Postives = 187/199 (93.97%), Query Frame = 1
Query:   67 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIF 663
            TAG+VI+CKAAVAWEAGKPL IEEVEVAPPQ  EVR+KIL+T+LCHTDVYFWEAKGQTP+FPRI GHEAGGIVESVGEGVT+L PGDHVLPVFTGECKEC HC SEESNMCDLLRIN DRGVMI DG+SRF+IKGKPI+HFVGTSTFSEYTV HVGC+AKINP APLDKVC+LSCG STGFGATVNVAKPKKGQ+VAIF
Sbjct:    3 TAGKVIKCKAAVAWEAGKPLSIEEVEVAPPQAMEVRVKILYTALCHTDVYFWEAKGQTPVFPRILGHEAGGIVESVGEGVTELAPGDHVLPVFTGECKECDHCKSEESNMCDLLRINVDRGVMIGDGKSRFTIKGKPIFHFVGTSTFSEYTVIHVGCLAKINPEAPLDKVCILSCGFSTGFGATVNVAKPKKGQTVAIF 201          
BLAST of FC921306 vs. ExPASy Swiss-Prot
Match: ADH2_ORYSI (Alcohol dehydrogenase 2 OS=Oryza sativa subsp. indica GN=ADH2 PE=2 SV=1)

HSP 1 Score: 370.548 bits (950), Expect = 4.742e-102
Identity = 174/199 (87.44%), Postives = 187/199 (93.97%), Query Frame = 1
Query:   67 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIF 663
            TAG+VI+CKAAVAWEAGKPL IEEVEVAPPQ  EVR+KIL+T+LCHTDVYFWEAKGQTP+FPRI GHEAGGIVESVGEGVT+L PGDHVLPVFTGECKEC HC SEESNMCDLLRIN DRGVMI DG+SRF+IKGKPI+HFVGTSTFSEYTV HVGC+AKINP APLDKVC+LSCG STGFGATVNVAKPKKGQ+VAIF
Sbjct:    3 TAGKVIKCKAAVAWEAGKPLSIEEVEVAPPQAMEVRVKILYTALCHTDVYFWEAKGQTPVFPRILGHEAGGIVESVGEGVTELAPGDHVLPVFTGECKECDHCKSEESNMCDLLRINVDRGVMIGDGKSRFTIKGKPIFHFVGTSTFSEYTVIHVGCLAKINPEAPLDKVCILSCGFSTGFGATVNVAKPKKGQTVAIF 201          
BLAST of FC921306 vs. ExPASy Swiss-Prot
Match: ADH1_HORVU (Alcohol dehydrogenase 1 OS=Hordeum vulgare GN=ADH1 PE=2 SV=1)

HSP 1 Score: 370.548 bits (950), Expect = 4.742e-102
Identity = 175/199 (87.94%), Postives = 185/199 (92.96%), Query Frame = 1
Query:   67 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIF 663
            TAG+VI+CKAAVAWEAGKPL +EEVEVAPPQ  EVR+KILFTSLCHTDVYFWEAKGQ P+FPRIFGHEAGGIVESVGEGVTD+ PGDHVLPVFTGECKECPHC S ESNMCDLLRINTDRGVMI DG+SRFSI GKPIYHFVGTSTFSEYTV HVGCVAKINP APLDKVCVLSCGISTG GA++NVAKP KG +VAIF
Sbjct:    3 TAGKVIKCKAAVAWEAGKPLTMEEVEVAPPQAMEVRVKILFTSLCHTDVYFWEAKGQIPMFPRIFGHEAGGIVESVGEGVTDVAPGDHVLPVFTGECKECPHCKSAESNMCDLLRINTDRGVMIGDGKSRFSIGGKPIYHFVGTSTFSEYTVMHVGCVAKINPEAPLDKVCVLSCGISTGLGASINVAKPPKGSTVAIF 201          
BLAST of FC921306 vs. ExPASy Swiss-Prot
Match: ADH1_PENAM (Alcohol dehydrogenase 1 OS=Pennisetum americanum GN=ADH1 PE=2 SV=1)

HSP 1 Score: 368.622 bits (945), Expect = 1.802e-101
Identity = 174/199 (87.44%), Postives = 185/199 (92.96%), Query Frame = 1
Query:   67 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIF 663
            TAG+VI+CKAAVAWEAGKPL IEEVEVAPPQ  EVR+KIL+TSLCHTDVYFWEAKGQTP+FPRIFGHEAGGI+ESVGEGVTD+ PGDHVLPVFTGECKECPHC S ESNMCDLLRINT RGVMI DG+SRFSI GKPIYHFVGTSTFSEYTV HVGCVAKINP APLDKVCVLSCGISTG GA++NVAKP KG +VAIF
Sbjct:    3 TAGKVIKCKAAVAWEAGKPLSIEEVEVAPPQAMEVRVKILYTSLCHTDVYFWEAKGQTPVFPRIFGHEAGGIIESVGEGVTDVAPGDHVLPVFTGECKECPHCKSAESNMCDLLRINTVRGVMIGDGKSRFSINGKPIYHFVGTSTFSEYTVMHVGCVAKINPEAPLDKVCVLSCGISTGLGASINVAKPPKGSTVAIF 201          
BLAST of FC921306 vs. ExPASy Swiss-Prot
Match: ADH1_MAIZE (Alcohol dehydrogenase 1 OS=Zea mays GN=ADH1 PE=2 SV=1)

HSP 1 Score: 367.081 bits (941), Expect = 5.243e-101
Identity = 173/199 (86.93%), Postives = 184/199 (92.46%), Query Frame = 1
Query:   67 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIF 663
            TAG+VI+CKAAVAWEAGKPL IEEVEVAPPQ  EVR+KILFTSLCHTDVYFWEAKGQTP+FPRIFGHEAGGI+ESVGEGVTD+ PGDHVLPVFTGECKEC HC S ESNMCDLLRINTDRGVMI DG+SRFSI GKPIYHFVGTSTFSEYTV HVGCVAKINP APLDKVCVLSCG STG GA++NVAKP KG +VA+F
Sbjct:    3 TAGKVIKCKAAVAWEAGKPLSIEEVEVAPPQAMEVRVKILFTSLCHTDVYFWEAKGQTPVFPRIFGHEAGGIIESVGEGVTDVAPGDHVLPVFTGECKECAHCKSAESNMCDLLRINTDRGVMIADGKSRFSINGKPIYHFVGTSTFSEYTVMHVGCVAKINPQAPLDKVCVLSCGYSTGLGASINVAKPPKGSTVAVF 201          
BLAST of FC921306 vs. ExPASy Swiss-Prot
Match: ADH3_HORVU (Alcohol dehydrogenase 3 OS=Hordeum vulgare GN=ADH3 PE=3 SV=1)

HSP 1 Score: 363.229 bits (931), Expect = 7.571e-100
Identity = 170/199 (85.43%), Postives = 185/199 (92.96%), Query Frame = 1
Query:   67 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIF 663
            TAG+VI+CKAAVAWEAGKPL IEEVEVAPPQ  EVR+KIL+T+LCHTDVYFWEAKGQTP+FPRI GHEAGGIVESVGEGVT+L PGDHVLPVFTGECK+C HC SEESN+CDLLRIN DRGVMI DGQSRF+I GKPI+HFVGTSTFSEYTV HVGC+AKINP APLDKVCVLSCG+STG GAT+NVAKPKKG +VAIF
Sbjct:    3 TAGKVIKCKAAVAWEAGKPLSIEEVEVAPPQAMEVRVKILYTALCHTDVYFWEAKGQTPVFPRILGHEAGGIVESVGEGVTELVPGDHVLPVFTGECKDCAHCKSEESNLCDLLRINVDRGVMIGDGQSRFTINGKPIFHFVGTSTFSEYTVIHVGCLAKINPEAPLDKVCVLSCGLSTGLGATLNVAKPKKGSTVAIF 201          
BLAST of FC921306 vs. ExPASy Swiss-Prot
Match: ADH2_MAIZE (Alcohol dehydrogenase 2 OS=Zea mays GN=ADH2 PE=2 SV=1)

HSP 1 Score: 358.992 bits (920), Expect = 1.428e-98
Identity = 167/199 (83.92%), Postives = 183/199 (91.96%), Query Frame = 1
Query:   67 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIF 663
            TAG+VI+C+AAV WEAGKPL IEEVEVAPPQ  EVR+KIL+T+LCHTDVYFWEAKGQTP+FPRI GHEAGGIVESVGEGVTD+ PGDHVLPVFTGECKEC HC SEESNMCDLLRIN DRGVMI DG+SRF+I G+PI+HFVGTSTFSEYTV HVGC+AKINP APLDKVC+LSCGISTG GAT+NVAKP KG +VAIF
Sbjct:    3 TAGKVIKCRAAVTWEAGKPLSIEEVEVAPPQAMEVRIKILYTALCHTDVYFWEAKGQTPVFPRILGHEAGGIVESVGEGVTDVAPGDHVLPVFTGECKECAHCKSEESNMCDLLRINVDRGVMIGDGKSRFTISGQPIFHFVGTSTFSEYTVIHVGCLAKINPEAPLDKVCILSCGISTGLGATLNVAKPAKGSTVAIF 201          
BLAST of FC921306 vs. ExPASy Swiss-Prot
Match: ADH2_HORVU (Alcohol dehydrogenase 2 OS=Hordeum vulgare GN=ADH2 PE=3 SV=1)

HSP 1 Score: 352.443 bits (903), Expect = 1.336e-96
Identity = 166/199 (83.42%), Postives = 182/199 (91.46%), Query Frame = 1
Query:   67 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIF 663
            TAG+VI+CKAAVAWEAGKPL +EEVE APPQ  EVR KIL+T+LCHTDVYFWEA GQTP+FPRI GHEAGGIVESVGEGVT+L PGDHVLPVFTGECKEC HC SEESN+CDLLRIN DRGVMI+DGQSRF+I GKPI+HF+GTSTFSEYTV HVGCVAKI+P APLDKVC+LSCGISTG GAT+NV KPKKG +VAIF
Sbjct:    3 TAGKVIKCKAAVAWEAGKPLSMEEVEDAPPQAMEVRDKILYTALCHTDVYFWEANGQTPVFPRILGHEAGGIVESVGEGVTELVPGDHVLPVFTGECKECAHCMSEESNLCDLLRINVDRGVMIDDGQSRFTIDGKPIFHFLGTSTFSEYTVIHVGCVAKIDPEAPLDKVCLLSCGISTGLGATLNVTKPKKGMTVAIF 201          
The following BLAST results are available for this feature:
BLAST of FC921306 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 137
Match NameE-valueIdentityDescription
ADH_FRAAN3.631e-10286.14Alcohol dehydrogenase OS=Fragaria ananassa GN=ADH ... [more]
ADH2_SOLLC4.742e-10287.13Alcohol dehydrogenase 2 OS=Solanum lycopersicum GN... [more]
ADH2_ORYSJ4.742e-10287.44Alcohol dehydrogenase 2 OS=Oryza sativa subsp. jap... [more]
ADH2_ORYSI4.742e-10287.44Alcohol dehydrogenase 2 OS=Oryza sativa subsp. ind... [more]
ADH1_HORVU4.742e-10287.94Alcohol dehydrogenase 1 OS=Hordeum vulgare GN=ADH1... [more]
ADH1_PENAM1.802e-10187.44Alcohol dehydrogenase 1 OS=Pennisetum americanum G... [more]
ADH1_MAIZE5.243e-10186.93Alcohol dehydrogenase 1 OS=Zea mays GN=ADH1 PE=2 S... [more]
ADH3_HORVU7.571e-10085.43Alcohol dehydrogenase 3 OS=Hordeum vulgare GN=ADH3... [more]
ADH2_MAIZE1.428e-9883.92Alcohol dehydrogenase 2 OS=Zea mays GN=ADH2 PE=2 S... [more]
ADH2_HORVU1.336e-9683.42Alcohol dehydrogenase 2 OS=Hordeum vulgare GN=ADH2... [more]

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Properties
Property NameValue
Genbank descriptionC32103D12EF RVDevelopN Citrus clementina cDNA clone C32103D12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921306 ID=FC921306; Name=FC921306; organism=Citrus clementina; type=EST; length=705bp
GCAGGCTAAACACTGCTAATTTTACAGGTGTTGAGAGTATCATCATTCAT
CATCAATATGTCTGGCACAGCTGGTCAAGTTATTCGCTGCAAAGCGGCGG
TGGCATGGGAGGCGGGGAAGCCACTGGTGATTGAAGAAGTGGAGGTGGCT
CCACCACAGAAAAATGAAGTTCGATTGAAGATCCTCTTCACCTCTTTATG
CCATACTGATGTTTACTTCTGGGAAGCCAAGGGACAAACACCTCTCTTTC
CTCGCATTTTTGGTCACGAAGCTGGAGGGATTGTAGAAAGTGTAGGGGAG
GGGGTAACTGATCTCCAACCAGGAGACCATGTTCTTCCTGTGTTCACAGG
AGAGTGCAAGGAATGTCCTCACTGTCATTCAGAGGAAAGCAATATGTGTG
ACCTCCTCAGGATCAATACTGACAGGGGTGTTATGATTAATGATGGTCAG
TCGAGATTCTCGATTAAGGGGAAGCCAATTTACCATTTTGTGGGCACTTC
TACCTTCAGTGAATACACTGTTACCCATGTCGGTTGTGTTGCTAAGATCA
ATCCTGCTGCCCCTCTTGACAAAGTTTGTGTGCTTAGCTGTGGAATCTCC
ACAGGTTTTGGGGCTACTGTTAATGTCGCCAAACCGAAGAAAGGCCAGTC
TGTTGCCATTTTTGGATTGGGTGCAGTTGGCCTCGCTGCTGCCGAAGGGG
CAAGG
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