FC921306

Overview
NameFC921306
Unique NameFC921306
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length705
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921306 vs. ExPASy Swiss-Prot
Match: ADHX_ORYSI (Alcohol dehydrogenase class-3 OS=Oryza sativa subsp. indica GN=ADHIII PE=3 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 3.203e-74
Identity = 133/201 (66.17%), Postives = 154/201 (76.62%), Query Frame = 1
Query:   61 SGTAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIF 663
            S T GQVI CKAAVAWEA KP+ IE+V+VAPPQ  EVR+KILFT+LCHTD Y W  K    LFP I GHEA GIVESVGEGVT++QPGDHV+P +  EC+EC  C S ++N+C  +R  T  GVM+ND +SRFSI GKPIYHF+GTSTFS+YTV H   VAKINP APLDKVC+L CG+STG GA  N AK + G  VAIF
Sbjct:    3 SSTQGQVITCKAAVAWEANKPMTIEDVQVAPPQAGEVRVKILFTALCHTDHYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRAATGVGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKINPQAPLDKVCLLGCGVSTGLGAVWNTAKVEAGSIVAIF 203          
BLAST of FC921306 vs. ExPASy Swiss-Prot
Match: ADHX_ORYSJ (Alcohol dehydrogenase class-3 OS=Oryza sativa subsp. japonica GN=Os02g0815500 PE=2 SV=1)

HSP 1 Score: 276.944 bits (707), Expect = 7.136e-74
Identity = 132/201 (65.67%), Postives = 154/201 (76.62%), Query Frame = 1
Query:   61 SGTAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIF 663
            S T GQVI CKAAVAWEA +P+ IE+V+VAPPQ  EVR+KILFT+LCHTD Y W  K    LFP I GHEA GIVESVGEGVT++QPGDHV+P +  EC+EC  C S ++N+C  +R  T  GVM+ND +SRFSI GKPIYHF+GTSTFS+YTV H   VAKINP APLDKVC+L CG+STG GA  N AK + G  VAIF
Sbjct:    3 SSTQGQVITCKAAVAWEANRPMTIEDVQVAPPQAGEVRVKILFTALCHTDHYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRAATGVGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKINPQAPLDKVCLLGCGVSTGLGAVWNTAKVEAGSIVAIF 203          
BLAST of FC921306 vs. ExPASy Swiss-Prot
Match: ADHX_MAIZE (Alcohol dehydrogenase class-3 OS=Zea mays GN=FDH PE=2 SV=1)

HSP 1 Score: 273.863 bits (699), Expect = 6.041e-73
Identity = 132/201 (65.67%), Postives = 153/201 (76.12%), Query Frame = 1
Query:   61 SGTAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIF 663
            S T GQVI CKAAVA+E  KPLVIE+V+VAPPQ  EVR+KILFT+LCHTD Y W  K    LFP I GHEA GIVESVGEGVTD+QPGDHV+P +  ECKEC  C S ++N+C  +R  T  GVM+ND +SRFS+ GKPIYHF+GTSTFS+YTV H   VAKINP APLDKVC+L CG+ TG GA  N AK + G  VA+F
Sbjct:    3 SPTQGQVITCKAAVAYEPNKPLVIEDVQVAPPQAGEVRVKILFTALCHTDHYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTDVQPGDHVIPCYQAECKECKFCKSGKTNLCGKVRSATGVGVMMNDMKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVAKINPQAPLDKVCLLGCGVPTGLGAVWNTAKVESGSVVAVF 203          
BLAST of FC921306 vs. ExPASy Swiss-Prot
Match: ADHX_ARATH (Alcohol dehydrogenase class-3 OS=Arabidopsis thaliana GN=ADH2 PE=1 SV=2)

HSP 1 Score: 267.314 bits (682), Expect = 5.654e-71
Identity = 126/199 (63.32%), Postives = 152/199 (76.38%), Query Frame = 1
Query:   67 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIF 663
            T GQVI CKAAVA+E  KPLVIE+V+VAPPQ  EVR+KIL+T+LCHTD Y W  K    LFP I GHEA GIVESVGEGVT++Q GDHV+P +  EC+EC  C S ++N+C  +R  T  G+M+ND +SRFS+ GKPIYHF+GTSTFS+YTV H   VAKI+P APLDKVC+L CG+ TG GA  N AK + G +VAIF
Sbjct:    3 TQGQVITCKAAVAYEPNKPLVIEDVQVAPPQAGEVRIKILYTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVAKIDPTAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSNVAIF 201          
BLAST of FC921306 vs. ExPASy Swiss-Prot
Match: ADHX_PEA (Alcohol dehydrogenase class-3 OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 265.774 bits (678), Expect = 1.645e-70
Identity = 129/199 (64.82%), Postives = 150/199 (75.38%), Query Frame = 1
Query:   67 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIF 663
            T GQVI CKAAVAWE  KPL IE+VEVAPPQ NEVR++ILFT+LCHTD Y    K    LFP I GHEA GIVESVGEGVTD++PGDHV+P +  EC EC  C S ++N+C  +R  T  GVM+ D +SRFS+KGKPIYHF+GTSTFS+YTV H   VAKI+P APLDKVC+L CG+ TG GA  N AK + G  VAIF
Sbjct:    2 TQGQVITCKAAVAWEPNKPLTIEDVEVAPPQANEVRIQILFTALCHTDAYTLGGKDPEGLFPCILGHEAAGIVESVGEGVTDVKPGDHVIPSYQAECGECKFCKSPKTNLCGKVRAATGVGVMMADRKSRFSVKGKPIYHFMGTSTFSQYTVVHDVSVAKIHPDAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAIF 200          
BLAST of FC921306 vs. ExPASy Swiss-Prot
Match: ADHL6_ARATH (Alcohol dehydrogenase-like 6 OS=Arabidopsis thaliana GN=At5g24760 PE=2 SV=2)

HSP 1 Score: 248.825 bits (634), Expect = 2.081e-65
Identity = 117/196 (59.69%), Postives = 149/196 (76.02%), Query Frame = 1
Query:   76 QVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIF 663
            QVI C AAVAW AG+PLV+EEVEV+PPQ  E+R+K++ TSLC +D+  WE++    L PRIFGHEA GIVES+GEGVT+ + GDHVL VFTGEC  C HC S +SNMC +L +   +G+M +D ++RFSIKGKP+YH+   S+FSEYTV H GC  K++P APL K+C+LSCG++ G GA  NVA  +KG SV IF
Sbjct:   12 QVITCNAAVAWRAGEPLVMEEVEVSPPQPLEIRIKVVCTSLCRSDLSAWESQS---LLPRIFGHEAAGIVESIGEGVTEFEKGDHVLAVFTGECGSCRHCISGKSNMCQVLGMER-KGLMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLAPLHKICLLSCGVAAGLGAAWNVADVQKGSSVVIF 203          
BLAST of FC921306 vs. ExPASy Swiss-Prot
Match: ADHX_RAT (Alcohol dehydrogenase class-3 OS=Rattus norvegicus GN=Adh5 PE=1 SV=2)

HSP 1 Score: 244.588 bits (623), Expect = 3.925e-64
Identity = 119/198 (60.10%), Postives = 147/198 (74.24%), Query Frame = 1
Query:   70 AGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIF 663
            A QVIRCKAAVAWEAGKPL IEE+EVAPPQ +EVR+KI+ T++CHTD Y          FP I GHE  GIVESVGEGVT L+ GD V+P++  +C EC  C + ++N+C  +R+   +G+M  DG SRF+ KGKPI HF+GTSTFSEYTV     VAKI+P+APLDKVC+L CGISTG+GA VN AK + G + A+F
Sbjct:    2 ANQVIRCKAAVAWEAGKPLSIEEIEVAPPQAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLM-PDGTSRFTCKGKPILHFMGTSTFSEYTVVADISVAKIDPSAPLDKVCLLGCGISTGYGAAVNTAKVEPGSTCAVF 198          
BLAST of FC921306 vs. ExPASy Swiss-Prot
Match: ADHX_MOUSE (Alcohol dehydrogenase class-3 OS=Mus musculus GN=Adh5 PE=1 SV=3)

HSP 1 Score: 241.891 bits (616), Expect = 2.544e-63
Identity = 117/198 (59.09%), Postives = 147/198 (74.24%), Query Frame = 1
Query:   70 AGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIF 663
            A QVIRCKAAVAWEAGKPL IEE+EVAPP+ +EVR+KIL T++CHTD Y          FP I GHE  GIVESVGEGVT L+ GD V+P++  +C EC  C + ++N+C  +R+   +G+M  DG SRF+ KGK ++HF+GTSTFSEYTV     VAKI+P+APLDKVC+L CGISTG+GA VN AK + G + A+F
Sbjct:    2 ANQVIRCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKILATAVCHTDAYTLSGADPEGCFPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLM-PDGTSRFTCKGKSVFHFMGTSTFSEYTVVADISVAKIDPSAPLDKVCLLGCGISTGYGAAVNTAKVEPGSTCAVF 198          
BLAST of FC921306 vs. ExPASy Swiss-Prot
Match: ADHL4_ARATH (Alcohol dehydrogenase-like 4 OS=Arabidopsis thaliana GN=At1g64710 PE=2 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 4.798e-62
Identity = 113/202 (55.94%), Postives = 150/202 (74.26%), Query Frame = 1
Query:   67 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTP-LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRF--SIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIF 663
            T G+VI CKAAVAW AG+PLV+E+V+V PPQ+ EVR++ILFTS+CHTD+  W+ + +    +PRI GHEA GIVESVGEGV ++  GDHVLP+FTGEC +C  C  + +N+C+  R++  + VM+ DG++RF  S   KPIYHF+ TSTFSEYTV    CV K++P  PL+K+ +LSCG+STG GA  NVA  +   +VAIF
Sbjct:    3 TQGKVITCKAAVAWGAGEPLVMEDVKVDPPQRLEVRIRILFTSICHTDLSAWKGENEAQRAYPRILGHEAAGIVESVGEGVEEMMAGDHVLPIFTGECGDCRVCKRDGANLCERFRVDPMKKVMVTDGKTRFFTSKDNKPIYHFLNTSTFSEYTVIDSACVLKVDPLFPLEKISLLSCGVSTGVGAAWNVADIQPASTVAIF 204          
BLAST of FC921306 vs. ExPASy Swiss-Prot
Match: ADH1_ZEALU (Alcohol dehydrogenase 1 (Fragment) OS=Zea luxurians GN=ADH1 PE=3 SV=2)

HSP 1 Score: 236.113 bits (601), Expect = 1.396e-61
Identity = 110/128 (85.94%), Postives = 117/128 (91.41%), Query Frame = 1
Query:  280 IVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIF 663
            I+ESVGEGVTD+ PGDHVLPVFTGECKEC HC S ESNMCDLLRINTDRGVMI DG+SRFSI GKPIYHFVGTSTFSEYTV HVGCVAKINP APLDKVCVLSCGISTG GA++NVAKP KG +VA+F
Sbjct:    1 IIESVGEGVTDVAPGDHVLPVFTGECKECAHCKSAESNMCDLLRINTDRGVMIGDGKSRFSINGKPIYHFVGTSTFSEYTVMHVGCVAKINPQAPLDKVCVLSCGISTGLGASINVAKPPKGSTVAVF 128          
The following BLAST results are available for this feature:
BLAST of FC921306 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 137
Match NameE-valueIdentityDescription
ADHX_ORYSI3.203e-7466.17Alcohol dehydrogenase class-3 OS=Oryza sativa subs... [more]
ADHX_ORYSJ7.136e-7465.67Alcohol dehydrogenase class-3 OS=Oryza sativa subs... [more]
ADHX_MAIZE6.041e-7365.67Alcohol dehydrogenase class-3 OS=Zea mays GN=FDH P... [more]
ADHX_ARATH5.654e-7163.32Alcohol dehydrogenase class-3 OS=Arabidopsis thali... [more]
ADHX_PEA1.645e-7064.82Alcohol dehydrogenase class-3 OS=Pisum sativum PE=... [more]
ADHL6_ARATH2.081e-6559.69Alcohol dehydrogenase-like 6 OS=Arabidopsis thalia... [more]
ADHX_RAT3.925e-6460.10Alcohol dehydrogenase class-3 OS=Rattus norvegicus... [more]
ADHX_MOUSE2.544e-6359.09Alcohol dehydrogenase class-3 OS=Mus musculus GN=A... [more]
ADHL4_ARATH4.798e-6255.94Alcohol dehydrogenase-like 4 OS=Arabidopsis thalia... [more]
ADH1_ZEALU1.396e-6185.94Alcohol dehydrogenase 1 (Fragment) OS=Zea luxurian... [more]

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Properties
Property NameValue
Genbank descriptionC32103D12EF RVDevelopN Citrus clementina cDNA clone C32103D12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921306 ID=FC921306; Name=FC921306; organism=Citrus clementina; type=EST; length=705bp
GCAGGCTAAACACTGCTAATTTTACAGGTGTTGAGAGTATCATCATTCAT
CATCAATATGTCTGGCACAGCTGGTCAAGTTATTCGCTGCAAAGCGGCGG
TGGCATGGGAGGCGGGGAAGCCACTGGTGATTGAAGAAGTGGAGGTGGCT
CCACCACAGAAAAATGAAGTTCGATTGAAGATCCTCTTCACCTCTTTATG
CCATACTGATGTTTACTTCTGGGAAGCCAAGGGACAAACACCTCTCTTTC
CTCGCATTTTTGGTCACGAAGCTGGAGGGATTGTAGAAAGTGTAGGGGAG
GGGGTAACTGATCTCCAACCAGGAGACCATGTTCTTCCTGTGTTCACAGG
AGAGTGCAAGGAATGTCCTCACTGTCATTCAGAGGAAAGCAATATGTGTG
ACCTCCTCAGGATCAATACTGACAGGGGTGTTATGATTAATGATGGTCAG
TCGAGATTCTCGATTAAGGGGAAGCCAATTTACCATTTTGTGGGCACTTC
TACCTTCAGTGAATACACTGTTACCCATGTCGGTTGTGTTGCTAAGATCA
ATCCTGCTGCCCCTCTTGACAAAGTTTGTGTGCTTAGCTGTGGAATCTCC
ACAGGTTTTGGGGCTACTGTTAATGTCGCCAAACCGAAGAAAGGCCAGTC
TGTTGCCATTTTTGGATTGGGTGCAGTTGGCCTCGCTGCTGCCGAAGGGG
CAAGG
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