FC921312
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921312 vs. ExPASy Swiss-Prot
Match: ISPF_VIBPA (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Vibrio parahaemolyticus GN=ispF PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.041e-26 Identity = 52/100 (52.00%), Postives = 71/100 (71.00%), Query Frame = 2 Query: 296 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQ 595 R+GHGFD+H+ P+IIGG+ +P+E+G AHSDGDV LH + DA+LGA+ DIG+ FPD+D KWKGA S +K+ R + E GY +GN D T++ Q Sbjct: 3 RIGHGFDVHKFGGEGPVIIGGVAIPYEQGLIAHSDGDVALHALTDALLGAIAAGDIGRHFPDTDDKWKGANSRELLKDVYRRVKEQGYRLGNADVTIMAQ 102
BLAST of FC921312 vs. ExPASy Swiss-Prot
Match: ISPF_VIBCM (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Vibrio cholerae serotype O1 (strain M66-2) GN=ispF PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.041e-26 Identity = 53/100 (53.00%), Postives = 70/100 (70.00%), Query Frame = 2 Query: 296 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQ 595 R+GHGFD+HR P+IIGG+ +P+E+G AHSDGDV LH + DA+LGA+ DIG+ FPD+D KWKGA S +K+ R + GY +GN D T+I Q Sbjct: 3 RIGHGFDVHRFGGEGPIIIGGVKIPYEQGLIAHSDGDVALHALSDALLGAIAAGDIGRHFPDTDDKWKGADSRELLKDVYRRVKAQGYVLGNADVTIIAQ 102
BLAST of FC921312 vs. ExPASy Swiss-Prot
Match: ISPF_VIBCH (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Vibrio cholerae GN=ispF PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.041e-26 Identity = 53/100 (53.00%), Postives = 70/100 (70.00%), Query Frame = 2 Query: 296 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQ 595 R+GHGFD+HR P+IIGG+ +P+E+G AHSDGDV LH + DA+LGA+ DIG+ FPD+D KWKGA S +K+ R + GY +GN D T+I Q Sbjct: 3 RIGHGFDVHRFGGEGPIIIGGVKIPYEQGLIAHSDGDVALHALSDALLGAIAAGDIGRHFPDTDDKWKGADSRELLKDVYRRVKAQGYVLGNADVTIIAQ 102
BLAST of FC921312 vs. ExPASy Swiss-Prot
Match: ISPF_VIBC3 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=ispF PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.041e-26 Identity = 53/100 (53.00%), Postives = 70/100 (70.00%), Query Frame = 2 Query: 296 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQ 595 R+GHGFD+HR P+IIGG+ +P+E+G AHSDGDV LH + DA+LGA+ DIG+ FPD+D KWKGA S +K+ R + GY +GN D T+I Q Sbjct: 3 RIGHGFDVHRFGGEGPIIIGGVKIPYEQGLIAHSDGDVALHALSDALLGAIAAGDIGRHFPDTDDKWKGADSRELLKDVYRRVKAQGYVLGNADVTIIAQ 102
BLAST of FC921312 vs. ExPASy Swiss-Prot
Match: ISPF_SHEHH (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Shewanella halifaxensis (strain HAW-EB4) GN=ispF PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.041e-26 Identity = 53/103 (51.46%), Postives = 74/103 (71.84%), Query Frame = 2 Query: 287 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQ 595 + R+GHGFD+H+ PLI+GG++VP+E G AHSDGDV LH + DAILGA+ L DIG+ FPD+DP++KGA S V ++ +L + G+ + NLD T+I Q Sbjct: 1 MKIRIGHGFDVHKFGGEPPLILGGVDVPYEVGLIAHSDGDVALHAISDAILGAMALGDIGKHFPDTDPEFKGADSRVLLRHCYQLATDMGFSLSNLDVTIIAQ 103
BLAST of FC921312 vs. ExPASy Swiss-Prot
Match: ISPF_SALAR (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=ispF PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.041e-26 Identity = 53/100 (53.00%), Postives = 72/100 (72.00%), Query Frame = 2 Query: 296 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQ 595 R+GHGFD+H P+IIGG+ +P+E+G AHSDGDV LH + DA+LGA L DIG++FPD+DP +KGA S ++EA R + GY +GN+D T+I Q Sbjct: 2 RIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYILGNVDVTIIAQ 101
BLAST of FC921312 vs. ExPASy Swiss-Prot
Match: ISPF_SYMTH (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Symbiobacterium thermophilum GN=ispF PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 6.037e-26 Identity = 49/99 (49.49%), Postives = 67/99 (67.68%), Query Frame = 2 Query: 299 VGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQ 595 +G G+D+HRL PG PL++GG+ +P +RG E HSD DV LH ++DA+LGA GL DIG FP +DP W GA S ++ V L+ E GY N D T++ + Sbjct: 3 IGFGYDVHRLVPGRPLVLGGVEIPSKRGLEGHSDADVALHALMDALLGAAGLGDIGTHFPPTDPAWAGANSLDLLRRVVGLLAEEGYRPVNCDITVVAE 101 HSP 2 Score: 28.1054 bits (61), Expect = 6.037e-26 Identity = 10/27 (37.04%), Postives = 16/27 (59.26%), Query Frame = 1 Query: 589 SSRPKLSPYKETIRTNLSELLGADPXR 669 + RPK+ PY +R + +LG +P R Sbjct: 100 AERPKIGPYVPAMRERIGAVLGVEPRR 126
BLAST of FC921312 vs. ExPASy Swiss-Prot
Match: ISPF_YERPY (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=ispF PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 6.583e-26 Identity = 57/102 (55.88%), Postives = 75/102 (73.53%), Query Frame = 2 Query: 296 RVGHGFDLHRL-EPGY-PLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQ 595 R+GHGFD+H+ E G PLIIGG+ +P+E+G AHSDGDV LH DA+LGA L DIG++FPD+DP +KGA S ++EA R + GY++GNLD T+I Q Sbjct: 2 RIGHGFDVHKFGENGSGPLIIGGVRIPYEKGLLAHSDGDVALHAATDALLGAAALGDIGKLFPDTDPAFKGADSRGLLREAYRRILAKGYKLGNLDITIIAQ 103
BLAST of FC921312 vs. ExPASy Swiss-Prot
Match: ISPF_YERPS (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Yersinia pseudotuberculosis GN=ispF PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 6.583e-26 Identity = 57/102 (55.88%), Postives = 75/102 (73.53%), Query Frame = 2 Query: 296 RVGHGFDLHRL-EPGY-PLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQ 595 R+GHGFD+H+ E G PLIIGG+ +P+E+G AHSDGDV LH DA+LGA L DIG++FPD+DP +KGA S ++EA R + GY++GNLD T+I Q Sbjct: 2 RIGHGFDVHKFGENGSGPLIIGGVRIPYEKGLLAHSDGDVALHAATDALLGAAALGDIGKLFPDTDPAFKGADSRGLLREAYRRILAKGYKLGNLDITIIAQ 103
BLAST of FC921312 vs. ExPASy Swiss-Prot
Match: ISPF_YERPP (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Yersinia pestis (strain Pestoides F) GN=ispF PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 6.583e-26 Identity = 57/102 (55.88%), Postives = 75/102 (73.53%), Query Frame = 2 Query: 296 RVGHGFDLHRL-EPGY-PLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQ 595 R+GHGFD+H+ E G PLIIGG+ +P+E+G AHSDGDV LH DA+LGA L DIG++FPD+DP +KGA S ++EA R + GY++GNLD T+I Q Sbjct: 2 RIGHGFDVHKFGENGSGPLIIGGVRIPYEKGLLAHSDGDVALHAATDALLGAAALGDIGKLFPDTDPAFKGADSRGLLREAYRRILAKGYKLGNLDITIIAQ 103 The following BLAST results are available for this feature:
BLAST of FC921312 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921312 ID=FC921312; Name=FC921312; organism=Citrus clementina; type=EST; length=675bpback to top |