FC921312
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921312 vs. ExPASy Swiss-Prot
Match: ISPDF_BARHE (Bifunctional enzyme ispD/ispF OS=Bartonella henselae GN=ispDF PE=3 SV=2) HSP 1 Score: 97.0561 bits (240), Expect = 3.069e-20 Identity = 43/101 (42.57%), Postives = 63/101 (62.38%), Query Frame = 2 Query: 296 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQD 598 R G+G+D+H E G LI+ GI +P + HSD DV LH + DA+L G DIG FP SDP+W+ S +F++ A+ ++ +AG I N+D TLI ++ Sbjct: 237 RTGNGYDVHSFEEGNSLILCGIKIPFHKKLNGHSDADVALHALTDALLATRGAGDIGTHFPPSDPQWQNVSSEIFLRHALDIVKQAGGRIANVDITLIAEE 337 HSP 2 Score: 22.3274 bits (46), Expect = 3.069e-20 Identity = 9/27 (33.33%), Postives = 14/27 (51.85%), Query Frame = 1 Query: 589 SSRPKLSPYKETIRTNLSELLGADPXR 669 + PK+ PY+ + NL +L P R Sbjct: 335 AEEPKIGPYRHAMVGNLMNMLTILPDR 361
BLAST of FC921312 vs. ExPASy Swiss-Prot
Match: ISPF_PROVI (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=ispF PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.165e-20 Identity = 44/100 (44.00%), Postives = 67/100 (67.00%), Query Frame = 2 Query: 296 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQ 595 R+G G D+H + G LI+GG+++P +G + HSD DVLLH V DA+LGA L DIG FPD+ P++K S + +K +L+++ G+ N+DA L+L+ Sbjct: 2 RIGIGIDVHSFKEGRKLIVGGVDIPSPKGLDGHSDADVLLHAVSDALLGAAALGDIGLHFPDTSPEFKDIDSMILLKHVGKLLEKNGWRTVNVDAMLLLE 101
BLAST of FC921312 vs. ExPASy Swiss-Prot
Match: ISPF_CELJU (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Cellvibrio japonicus (strain Ueda107) GN=ispF PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.165e-20 Identity = 42/103 (40.78%), Postives = 67/103 (65.05%), Query Frame = 2 Query: 287 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQ 595 + R+G G+D+H G ++IGG+ +PH G AHSDGDVLLH + DA+LGA+ L DIG+ FPD+D +++ A S ++ + + G+++ N D T++ Q Sbjct: 1 MSMRIGQGYDVHAFGEGEKIVIGGVVIPHHHGLVAHSDGDVLLHALCDALLGAVALGDIGKHFPDTDMQYRNADSRSLLRMVYAKVSQHGWKLANADMTIVAQ 103
BLAST of FC921312 vs. ExPASy Swiss-Prot
Match: ISPF_AKKM8 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Akkermansia muciniphila (strain ATCC BAA-835) GN=ispF PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.165e-20 Identity = 48/99 (48.48%), Postives = 65/99 (65.66%), Query Frame = 2 Query: 302 GHGFDLHRL-EPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQ 595 G G+D+HR E PL++GG+++P RG + HSD DVL H + DA+LGA GLPDIG FP DP K PS + +AV L+ E G I N+D++LI + Sbjct: 9 GIGYDIHRFAEVPRPLMLGGVHIPSSRGLDGHSDADVLCHAIADALLGAAGLPDIGYWFPPGDPSCKDIPSLDIVAKAVSLIRERGGRIVNVDSSLIAE 107
BLAST of FC921312 vs. ExPASy Swiss-Prot
Match: ISPDF_BARBK (Bifunctional enzyme ispD/ispF OS=Bartonella bacilliformis (strain ATCC 35685 / KC583) GN=ispDF PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 3.992e-20 Identity = 43/100 (43.00%), Postives = 62/100 (62.00%), Query Frame = 2 Query: 296 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQ 595 R G+G+D+H E G+ + + GI +P E+ HSD DV LH + DA+L G DIG FP SDP+WK A S +F+ A+ ++ +A I N+D TLI + Sbjct: 237 RTGNGYDVHSFEDGHYITLCGIKIPFEKKLNGHSDADVALHALTDALLATQGAGDIGTHFPPSDPQWKNASSEIFLHHAIEIIKKAEGRIANVDITLIAE 336 HSP 2 Score: 22.7126 bits (47), Expect = 3.992e-20 Identity = 7/21 (33.33%), Postives = 14/21 (66.67%), Query Frame = 1 Query: 589 SSRPKLSPYKETIRTNLSELL 651 + +PK+ PY+ + NL ++L Sbjct: 335 AEKPKIGPYRHIMTENLMKIL 355
BLAST of FC921312 vs. ExPASy Swiss-Prot
Match: ISPDF_WOLSU (Bifunctional enzyme ispD/ispF OS=Wolinella succinogenes GN=ispDF PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 3.996e-20 Identity = 42/98 (42.86%), Postives = 64/98 (65.31%), Query Frame = 2 Query: 302 GHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQ 595 G GFD+H G L + G+N+P +AHSDGDV +H ++DA+LGA G DIG+ FPDSD +KG S++ ++E ++ + G+E+ N D T++ Q Sbjct: 216 GSGFDVHAFMEGEGLRLAGVNIPAPVTFKAHSDGDVAIHALIDALLGAAGAGDIGEWFPDSDLAYKGVDSTLLLQEVIKFIRGIGFELINADLTIMAQ 313 HSP 2 Score: 26.1794 bits (56), Expect = 3.996e-20 Identity = 10/18 (55.56%), Postives = 13/18 (72.22%), Query Frame = 1 Query: 598 PKLSPYKETIRTNLSELL 651 PKLSPYKE + L E++ Sbjct: 315 PKLSPYKEAMERRLGEVM 332
BLAST of FC921312 vs. ExPASy Swiss-Prot
Match: ISPDF_CAMFF (Bifunctional enzyme ispD/ispF OS=Campylobacter fetus subsp. fetus (strain 82-40) GN=ispDF PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 3.997e-20 Identity = 41/98 (41.84%), Postives = 65/98 (66.33%), Query Frame = 2 Query: 302 GHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQ 595 G+GFD+H + G + + G+ +P+ + AHSDGDV LH + DA+LGA PDIG+++PD+D K+K S + ++ +V L+ G++I N D T+I Q Sbjct: 213 GNGFDVHAFKEGDFITLCGVKIPYSKAFIAHSDGDVALHALCDALLGAASAPDIGELYPDNDSKFKDIDSKILLQNSVNLIRSIGFDIINADITIIAQ 310 HSP 2 Score: 24.6386 bits (52), Expect = 3.997e-20 Identity = 9/26 (34.62%), Postives = 17/26 (65.38%), Query Frame = 1 Query: 598 PKLSPYKETIRTNLSELLGADPXRCN 675 PK+SPYK+ + ++++LG + N Sbjct: 312 PKISPYKDAMAKIVADILGIPLHKVN 337
BLAST of FC921312 vs. ExPASy Swiss-Prot
Match: ISPF_CHLP8 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Chlorobaculum parvum (strain NCIB 8327) GN=ispF PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 4.109e-20 Identity = 44/100 (44.00%), Postives = 63/100 (63.00%), Query Frame = 2 Query: 296 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQ 595 R+G G D+H+ LI+GG+ VP G HSD DVLLH + DA+LGA L DIG+ FPD+ P +K A S +K +L+++ GY+ N+D L+L+ Sbjct: 2 RIGIGIDVHQFSEDRKLIVGGVEVPSPVGLLGHSDADVLLHAISDALLGAAALGDIGKHFPDTSPDYKDADSMELLKHVGKLLEQEGYKPVNIDTMLLLE 101 HSP 2 Score: 25.0238 bits (53), Expect = 4.109e-20 Identity = 9/22 (40.91%), Postives = 15/22 (68.18%), Query Frame = 1 Query: 595 RPKLSPYKETIRTNLSELLGAD 660 +PK++PY E +R N++ L D Sbjct: 102 KPKIAPYIEQMRRNIASCLDMD 123
BLAST of FC921312 vs. ExPASy Swiss-Prot
Match: ISPDF_CAMHC (Bifunctional enzyme ispD/ispF OS=Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A) GN=ispDF PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 5.199e-20 Identity = 41/98 (41.84%), Postives = 62/98 (63.27%), Query Frame = 2 Query: 302 GHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQ 595 G+GFD+H G + +GG+ +P E HSD D +H ++DAILGA GL DIG++FPD+D +KG S + +++ V + G++I N D T+I Q Sbjct: 215 GNGFDVHAFAKGEFITLGGVKIPCEYSLVGHSDADAAIHALMDAILGACGLGDIGELFPDTDDSFKGIDSKILLQKVVNFVHLLGFKIINADITIIAQ 312 HSP 2 Score: 26.5646 bits (57), Expect = 5.199e-20 Identity = 11/21 (52.38%), Postives = 16/21 (76.19%), Query Frame = 1 Query: 589 SSRPKLSPYKETIRTNLSELL 651 + +PK+SPYKE + LSE+L Sbjct: 311 AQKPKISPYKEKMCEILSEIL 331
BLAST of FC921312 vs. ExPASy Swiss-Prot
Match: ISPF_WIGBR (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Wigglesworthia glossinidia brevipalpis GN=ispF PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.398e-20 Identity = 45/101 (44.55%), Postives = 72/101 (71.29%), Query Frame = 2 Query: 296 RVGHGFDLHRLEPGY-PLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQ 595 RVGHGFD+H+ Y PLI+GG+++P+ +G +HSDGDV++H ++D++LGA L DIG +FP++D K+K S + ++ + + Y+IGN+D TL L+ Sbjct: 2 RVGHGFDIHKFGKIYKPLILGGVHIPYCKGVVSHSDGDVIIHSIIDSLLGASSLGDIGILFPNNDIKYKNINSCILLQVVWNCIKKK-YKIGNIDVTLFLE 101 The following BLAST results are available for this feature:
BLAST of FC921312 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921312 ID=FC921312; Name=FC921312; organism=Citrus clementina; type=EST; length=675bpback to top |