FC921329

Overview
NameFC921329
Unique NameFC921329
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length716
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921329 vs. ExPASy Swiss-Prot
Match: Y5977_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana GN=At5g49770 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 9.875e-31
Identity = 72/166 (43.37%), Postives = 98/166 (59.04%), Query Frame = 3
Query:  180 MNMALHVYEDIMRMTENLSEKYIIGYGASSTVYKCVLKNCKPVAIKRLYSHYPQCLKEFETELETVGSIKHRNLVSLQGYSLSSSGNLLFYDFMENGSLWDILHGPTKKKKLDWDTRLKIALGAAQGLAYLHHDCSPRIIHRDVKSSNILLDKDFEAHLTDFGIAK 677
            M      +E++ + T N S+   +G G    VYK  L N + +AIKR      Q   EF+TE+E +  + H+N+V L G+       +L Y+++ NGSL D L G    K LDW  RLKIALG+ +GLAYLH    P IIHRDVKS+NILLD+   A + DFG++K
Sbjct:  617 MGTKAFTFEELSKCTNNFSDANDVGGGGYGQVYKGTLPNGQVIAIKRAQQGSMQGAFEFKTEIELLSRVHHKNVVKLLGFCFDQKEQMLVYEYIPNGSLRDGLSGKNGVK-LDWTRRLKIALGSGKGLAYLHELADPPIIHRDVKSNNILLDEHLTAKVADFGLSK 781          
BLAST of FC921329 vs. ExPASy Swiss-Prot
Match: Y2232_ARATH (Probable receptor-like protein kinase At2g23200 OS=Arabidopsis thaliana GN=At2g23200 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 9.875e-31
Identity = 80/192 (41.67%), Postives = 116/192 (60.42%), Query Frame = 3
Query:  108 PTHFPDGSLDKPVN-YSTPKLVILHMNMALHVYEDIMRMTENLSEKYIIGYGASSTVYKCVLKNCKPVAIKRLYSHYPQCLKEFETELETVGSIKHRNLVSLQGYSLSSSGNLLFYDFMENGSLWDILHGPTKKKKLDWDTRLKIALGAAQGLAYLHHDCSP-RIIHRDVKSSNILLDKDFEAHLTDFGIAK 677
            P H    S ++P++ Y    L  LH+ + +  + DI+  T N  E+ +IG G    VYK +L +    AIKR  +   Q + EF+TE++ +  I+HR+LVSL GY   +S  +L Y+FME G+L + L+G +    L W  RL+I +GAA+GL YLH   S   IIHRDVKS+NILLD+   A + DFG++K
Sbjct:  447 PLHRGGSSDNRPISQYHNSPLRNLHLGLTIP-FTDILSATNNFDEQLLIGKGGFGYVYKAILPDGTKAAIKRGKTGSGQGILEFQTEIQVLSRIRHRHLVSLTGYCEENSEMILVYEFMEKGTLKEHLYG-SNLPSLTWKQRLEICIGAARGLDYLHSSGSEGAIIHRDVKSTNILLDEHNIAKVADFGLSK 636          
BLAST of FC921329 vs. ExPASy Swiss-Prot
Match: SERK1_ARATH (Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana GN=SERK1 PE=1 SV=2)

HSP 1 Score: 133.65 bits (335), Expect = 9.875e-31
Identity = 72/167 (43.11%), Postives = 106/167 (63.47%), Query Frame = 3
Query:  222 TENLSEKYIIGYGASSTVYKCVLKNCKPVAIKRLYSHY-PQCLKEFETELETVGSIKHRNLVSLQGYSLSSSGNLLFYDFMENGSLWDILHG-PTKKKKLDWDTRLKIALGAAQGLAYLHHDCSPRIIHRDVKSSNILLDKDFEAHLTDFGIAKSLCVSKSYTSTYI 716
            ++  S K I+G G    VYK  L +   VA+KRL     P    +F+TE+E +    HRNL+ L+G+ ++ +  LL Y +M NGS+   L   P  +  LDW TR +IALG+A+GL+YLH  C P+IIHRDVK++NILLD++FEA + DFG+AK +    ++ +T +
Sbjct:  299 SDGFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQPPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAV 465          
BLAST of FC921329 vs. ExPASy Swiss-Prot
Match: CRK33_ARATH (Putative cysteine-rich receptor-like protein kinase 33 OS=Arabidopsis thaliana GN=CRK33 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 9.875e-31
Identity = 68/163 (41.72%), Postives = 99/163 (60.74%), Query Frame = 3
Query:  222 TENLSEKYIIGYGASSTVYKCVLKNCKPVAIKRLYSHYPQCLKEFETELETVGSIKHRNLVSLQGYSLSSSGNLLFYDFMENGSLWDILHGPTKKKKLDWDTRLKIALGAAQGLAYLHHDCSPRIIHRDVKSSNILLDKDFEAHLTDFGIAKSLCVSKSYTST 710
            T   S+  ++G G    V+K VL++   +A+KRL     Q ++EF+ E   V  ++HRNLV + G+ +     +L Y+F+ N SL   L  PTKK +LDW  R KI +G A+G+ YLHHD   +IIHRD+K+SNILLD + E  + DFG+A+   V +S   T
Sbjct:  318 TCTFSKCNMLGQGGFGEVFKGVLQDGSEIAVKRLSKESAQGVQEFQNETSLVAKLQHRNLVGVLGFCMEGEEKILVYEFVPNKSLDQFLFEPTKKGQLDWAKRYKIIVGTARGILYLHHDSPLKIIHRDLKASNILLDAEMEPKVADFGMARIFRVDQSRADT 480          
BLAST of FC921329 vs. ExPASy Swiss-Prot
Match: Y1677_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g67720 OS=Arabidopsis thaliana GN=At1g67720 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.290e-30
Identity = 72/152 (47.37%), Postives = 98/152 (64.47%), Query Frame = 3
Query:  222 TENLSEKYIIGYGASSTVYKCVLKNCKPVAIKRLYSHYPQCLKEFETELETVGSIKHRNLVSLQGYSLSSSGNLLFYDFMENGSLWDILHGPTKKKKLDWDTRLKIALGAAQGLAYLHHDCSPRIIHRDVKSSNILLDKDFEAHLTDFGIAK 677
            T+N S+K  +G G+  +VY   +K+ K VA+K          ++F TE+  +  I HRNLV L GY   +   +L Y++M NGSL D LHG +  K LDW TRL+IA  AA+GL YLH  C+P IIHRDVKSSNILLD +  A ++DFG+++
Sbjct:  605 TDNFSKK--VGRGSFGSVYYGRMKDGKEVAVKITADPSSHLNRQFVTEVALLSRIHHRNLVPLIGYCEEADRRILVYEYMHNGSLGDHLHGSSDYKPLDWLTRLQIAQDAAKGLEYLHTGCNPSIIHRDVKSSNILLDINMRAKVSDFGLSR 754          
BLAST of FC921329 vs. ExPASy Swiss-Prot
Match: Y5148_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g61480 OS=Arabidopsis thaliana GN=At5g61480 PE=1 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.684e-30
Identity = 67/159 (42.14%), Postives = 99/159 (62.26%), Query Frame = 3
Query:  246 IIGYGASSTVYKCVLKNCKPVAIKRLYSHYPQCLKEFE------TELETVGSIKHRNLVSLQGYSLSSSGNLLFYDFMENGSLWDILHG--PTKKKKLDWDTRLKIALGAAQGLAYLHHDCSPRIIHRDVKSSNILLDKDFEAHLTDFGIAKSLCVSKS 698
            I+G G++ TVYK  + N + +A+K+L+    +  K          E++ +G+++HRN+V L G   +    +L Y++M NGSL D+LHG   T     +W    +IA+G AQG+ YLHHDC P I+HRD+K SNILLD DFEA + DFG+AK +   +S
Sbjct:  724 ILGMGSTGTVYKAEMPNGEIIAVKKLWGKNKENGKIRRRKSGVLAEVDVLGNVRHRNIVRLLGCCTNRDCTMLLYEYMPNGSLDDLLHGGDKTMTAAAEWTALYQIAIGVAQGICYLHHDCDPVIVHRDLKPSNILLDADFEARVADFGVAKLIQTDES 882          
BLAST of FC921329 vs. ExPASy Swiss-Prot
Match: CRK8_ARATH (Cysteine-rich receptor-like protein kinase 8 OS=Arabidopsis thaliana GN=CRK8 PE=2 SV=2)

HSP 1 Score: 132.88 bits (333), Expect = 1.684e-30
Identity = 72/170 (42.35%), Postives = 98/170 (57.65%), Query Frame = 3
Query:  201 YEDIMRMTENLSEKYIIGYGASSTVYKCVLKNCKPVAIKRLYSHYPQCLKEFETELETVGSIKHRNLVSLQGYSLSSSGNLLFYDFMENGSLWDILHGPTKKKKLDWDTRLKIALGAAQGLAYLHHDCSPRIIHRDVKSSNILLDKDFEAHLTDFGIAKSLCVSKSYTST 710
            Y  I   T + +E   IG G    VYK    N K VA+KRL  +  Q   EF+TE+  V  ++HRNLV L G+SL     +L Y++M N SL  +L  PTK+ +LDW  R  I  G A+G+ YLH D    IIHRD+K+SNILLD D    + DFG+A+   + ++  +T
Sbjct:  343 YRTIQTATNDFAESNKIGRGGFGEVYKGTFSNGKEVAVKRLSKNSRQGEAEFKTEVVVVAKLQHRNLVRLLGFSLQGEERILVYEYMPNKSLDCLLFDPTKQTQLDWMQRYNIIGGIARGILYLHQDSRLTIIHRDLKASNILLDADINPKIADFGMARIFGLDQTQDNT 512          
BLAST of FC921329 vs. ExPASy Swiss-Prot
Match: Y4885_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g08850 OS=Arabidopsis thaliana GN=At4g08850 PE=1 SV=3)

HSP 1 Score: 132.494 bits (332), Expect = 2.200e-30
Identity = 68/167 (40.72%), Postives = 96/167 (57.49%), Query Frame = 3
Query:  201 YEDIMRMTENLSEKYIIGYGASSTVYKCVLKNCKPVAIKRLYS------HYPQCLKEFETELETVGSIKHRNLVSLQGYSLSSSGNLLFYDFMENGSLWDILHGPTKKKKLDWDTRLKIALGAAQGLAYLHHDCSPRIIHRDVKSSNILLDKDFEAHLTDFGIAKSL 683
            Y++I++ T     KY+IG G    VYK  L N   +A+K+L          P   +EF  E+  +  I+HRN+V L G+        L Y++ME GSL  +L    + KKLDW  R+ +  G A  L+Y+HHD SP I+HRD+ S NILL +D+EA ++DFG AK L
Sbjct:  765 YQEIIKATGEFDPKYLIGTGGHGKVYKAKLPNAI-MAVKKLNETTDSSISNPSTKQEFLNEIRALTEIRHRNVVKLFGFCSHRRNTFLVYEYMERGSLRKVLENDDEAKKLDWGKRINVVKGVAHALSYMHHDRSPAIVHRDISSGNILLGEDYEAKISDFGTAKLL 930          
BLAST of FC921329 vs. ExPASy Swiss-Prot
Match: Y2393_ARATH (Probable receptor-like protein kinase At2g39360 OS=Arabidopsis thaliana GN=At2g39360 PE=1 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.200e-30
Identity = 71/157 (45.22%), Postives = 100/157 (63.69%), Query Frame = 3
Query:  210 IMRMTENLSEKYIIGYGASSTVYKCVLKNCKPVAIKRLYSHYPQCLKEFETELETVGSIKHRNLVSLQGYSLSSSGNLLFYDFMENGSLWDILHGPTKKKKLDWDTRLKIALGAAQGLAYLHHDCSPRIIHRDVKSSNILLDKDFEAHLTDFGIAKS 680
            I   T++  E  +IG G    VYK VL++   VA+KR      Q L EF+TE+E +   +HR+LVSL GY   +S  ++ Y++ME G+L D L+    K +L W  RL+I +GAA+GL YLH   +  IIHRDVKS+NILLD +F A + DFG++K+
Sbjct:  480 IKEATDDFDESLVIGVGGFGKVYKGVLRDKTEVAVKRGAPQSRQGLAEFKTEVEMLTQFRHRHLVSLIGYCDENSEMIIVYEYMEKGTLKDHLYDLDDKPRLSWRQRLEICVGAARGLHYLHTGSTRAIIHRDVKSANILLDDNFMAKVADFGLSKT 636          
BLAST of FC921329 vs. ExPASy Swiss-Prot
Match: Y1105_ARATH (Probable receptor-like protein kinase At1g11050 OS=Arabidopsis thaliana GN=At1g11050 PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.200e-30
Identity = 75/177 (42.37%), Postives = 102/177 (57.63%), Query Frame = 3
Query:  204 EDIMRMTENLSEKYIIGYGASSTVYKCVLKNCKPVAIKRLYSHYPQCLKEFETELETVGSIKHRNLVSLQGYSL----SSSGNLLFYDFMENGSLWDIL--HGPTKKKKLDWDTRLKIALGAAQGLAYLHHDCSPRIIHRDVKSSNILLDKDFEAHLTDFGIAKSLCVSKSYTSTYI 716
            E++ + T N S+K  IG G    VYK VL +   +A+K++     Q   EF  E+E + ++KHRNLV L+G S+    S S   L YD+M NG+L D L   G T K  L W  R  I L  A+GLAYLH+   P I HRD+K +NILLD D  A + DFG+AK     +S+ +T +
Sbjct:  286 EELEKATNNFSQKNFIGRGGFGFVYKGVLPDGSVIAVKKVIESEFQGDAEFRNEVEIISNLKHRNLVPLRGCSMVDDDSESQRYLVYDYMSNGNLDDHLFPRGETTKMPLSWPQRKSIILDVAKGLAYLHYGVKPAIYHRDIKGTNILLDVDMRARVADFGLAKQSREGESHLTTRV 462          
The following BLAST results are available for this feature:
BLAST of FC921329 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 310
Match NameE-valueIdentityDescription
Y5977_ARATH9.875e-3143.37Probable leucine-rich repeat receptor-like protein... [more]
Y2232_ARATH9.875e-3141.67Probable receptor-like protein kinase At2g23200 OS... [more]
SERK1_ARATH9.875e-3143.11Somatic embryogenesis receptor kinase 1 OS=Arabido... [more]
CRK33_ARATH9.875e-3141.72Putative cysteine-rich receptor-like protein kinas... [more]
Y1677_ARATH1.290e-3047.37Probable LRR receptor-like serine/threonine-protei... [more]
Y5148_ARATH1.684e-3042.14Probable leucine-rich repeat receptor-like protein... [more]
CRK8_ARATH1.684e-3042.35Cysteine-rich receptor-like protein kinase 8 OS=Ar... [more]
Y4885_ARATH2.200e-3040.72Probable LRR receptor-like serine/threonine-protei... [more]
Y2393_ARATH2.200e-3045.22Probable receptor-like protein kinase At2g39360 OS... [more]
Y1105_ARATH2.200e-3042.37Probable receptor-like protein kinase At1g11050 OS... [more]

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Properties
Property NameValue
Genbank descriptionC32103F12EF RVDevelopN Citrus clementina cDNA clone C32103F12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921329 ID=FC921329; Name=FC921329; organism=Citrus clementina; type=EST; length=716bp
ATCCAACGGAACGAGTTACAATTTCTAAAGCAGCTATTCTCGGAATTGCT
CTCGGTGCACTTGTAATTCTTCTCATGATCCTGGTGGCAGCATGCCGACC
ACACAATCCTACTCATTTTCCAGATGGATCACTTGACAAACCAGTTAATT
ACTCCACTCCCAAGTTAGTGATCCTTCACATGAACATGGCACTTCATGTG
TATGAAGACATTATGAGGATGACCGAGAATTTGAGTGAGAAGTACATAAT
TGGTTATGGGGCATCGAGTACAGTGTACAAGTGTGTTCTTAAAAATTGTA
AGCCAGTGGCTATCAAGCGACTTTACTCTCACTATCCACAGTGCTTGAAG
GAATTTGAGACAGAGCTTGAGACGGTTGGGAGCATCAAGCACCGAAATCT
GGTCAGCCTCCAAGGATACTCGTTGTCCTCCTCAGGGAACCTTCTCTTCT
ATGATTTTATGGAAAATGGTAGTCTTTGGGATATTCTTCATGGTCCAACA
AAGAAGAAAAAGCTTGACTGGGACACTCGACTGAAAATAGCACTAGGAGC
TGCACAAGGGCTAGCGTATTTACACCATGATTGTAGTCCTCGAATCATCC
ACCGGGATGTGAAGTCCTCTAATATTCTATTGGACAAGGATTTTGAAGCC
CATCTCACAGATTTTGGAATTGCCAAAAGTTTATGTGTGTCCAAGTCGTA
TACATCTACTTACATC
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