FC921333

Overview
NameFC921333
Unique NameFC921333
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length673
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921333 vs. ExPASy Swiss-Prot
Match: TAER_MYCLE (Trans-acting enoyl reductase OS=Mycobacterium leprae GN=ML0129 PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 3.958e-23
Identity = 66/204 (32.35%), Postives = 110/204 (53.92%), Query Frame = 3
Query:   63 FDVIILGASGFTGKYVVREALKLFNLPSSPIKNLALAGRNPTKVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQWIPPAVPNQIEAYVSLES-DKRIV--GNFGTYESAVLGVANAQEVQKL 665
            FD+++ GA+GF+GK +  E L L    S     +ALAGR+  +++       P+ +   P++ AD + P +L  +  + +++L  VGPY  +G P+ AAC  +G DY D++GE  F       +H++A  TG+ ++ ACGFDS+P++L V    R+ I        +  + L S  +R V  G+   Y  A+L  +N  E  +L
Sbjct:    8 FDIVLYGATGFSGK-LTAEHLAL----SESTARIALAGRSSERLRNVRALLGPN-AQDWPLIVADASQPSTLEAMAGRAQVVLTTVGPYTRYGLPLVAACARTGTDYADLTGELMFCRNSIDLHHKQAAATGARIILACGFDSVPSDLNVYQLYRRVIEDRTGELCDTDLVLRSFSQRWVSGGSVAAYSEAMLTTSNDPEALRL 205          
BLAST of FC921333 vs. ExPASy Swiss-Prot
Match: TAER_MYCUA (Trans-acting enoyl reductase OS=Mycobacterium ulcerans (strain Agy99) GN=MUL_2000 PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.376e-22
Identity = 62/204 (30.39%), Postives = 105/204 (51.47%), Query Frame = 3
Query:   63 FDVIILGASGFTGKYVVREALKLFNLPSSPIKNLALAGRNPTKVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQWIPPAVPNQIEAYVSLESDKR---IVGNFGTYESAVLGVANAQEVQKL 665
            F++++ GA+GF+G    +   +           +ALAGR+P +++       P  S   P++ AD + P +L  + ++ +++L  VGPY  +G P+ AAC  +G DY D++GE  F       YH++A +TG+ +V ACGFDSIP++L V    R+          E  + L S  +     G+  TY  A+   ++  E  +L
Sbjct:    8 FEIVLYGATGFSGMLTGQHLAQ-----RDTNARIALAGRSPQRLRAVRDKLGPLAS-DWPLVVADASQPATLEEMATRAQVILTTVGPYTRYGLPLVAACAKAGTDYADLTGELMFCRNSIDLYHKQAADTGARIVLACGFDSIPSDLNVHHLYRRAAEDGTGELAETNLVLRSFSQRWASGGSVATYSEAMRTASSDPEAYRL 205          
The following BLAST results are available for this feature:
BLAST of FC921333 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
TAER_MYCLE3.958e-2332.35Trans-acting enoyl reductase OS=Mycobacterium lepr... [more]
TAER_MYCUA4.376e-2230.39Trans-acting enoyl reductase OS=Mycobacterium ulce... [more]

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Properties
Property NameValue
Genbank descriptionC32103G04EF RVDevelopN Citrus clementina cDNA clone C32103G04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921333 ID=FC921333; Name=FC921333; organism=Citrus clementina; type=EST; length=673bp
AAGAAAAAAAAGAAGAATCAAGAAAGAACACAATGCAAGCGCAGAGCCAG
ATTCCGGAATTATTTGATGTAATAATATTGGGAGCTTCAGGCTTCACAGG
CAAGTATGTGGTGAGAGAAGCCTTAAAGTTGTTCAATCTTCCTTCTTCTC
CTATCAAAAACCTAGCTTTGGCAGGCCGCAACCCCACCAAGGTTAAGCAA
GCCCTCCAATGGGCCTCCCCTTCCCATTCCCTTTCAATTCCGATCCTCAC
CGCTGACACCACCGACCCACCTTCCCTCCACCGCCTCTGCTCCCAAACCA
AGCTGCTTCTCAACTGCGTTGGCCCCTATCGCCTCCATGGAGATCCCGTT
GCCGCCGCCTGCGTGCACTCCGGGTGTGACTACTTGGATATAAGTGGGGA
GCCAGAGTTCATGGAGAGAATGGAGGCCAGGTACCACGAGAAGGCTGTGG
AAACAGGTTCTTTGCTGGTTTCTGCATGTGGATTTGATTCCATTCCTGCT
GAATTGGGGGTAATGTTCAATTCCAGGCAGTGGATACCCCCGGCGGTGCC
AAACCAAATTGAGGCTTACGTTAGCCTAGAGTCTGATAAAAGAATTGTGG
GAAATTTTGGTACATATGAGTCTGCTGTTTTGGGTGTGGCCAATGCTCAA
GAAGTGCAAAAGCTGAAGCAAAT
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