FC921346

Overview
NameFC921346
Unique NameFC921346
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length715
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: RLK6_ARATH (Receptor-like protein kinase At3g21340 OS=Arabidopsis thaliana GN=At3g21340 PE=1 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 2.050e-44
Identity = 88/215 (40.93%), Postives = 140/215 (65.12%), Query Frame = 2
Query:   53 RLFNYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAVKILKPSEDV-IKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGR 694
            R F Y ++++ T+NF  E ++GKGG   VY G + + +++AVK+L  S     KEF  E+E++  +HHKN++ L+G+C E  NL L+Y++++ G L E++ G K+  +   W  R K+ +  A+ LEYLH+G    ++HRDVK++NILL++    +L+DFGL++           T VAGT GYL PEY+    +N+K DVY+FG+VLLE++T +
Sbjct:  580 RRFTYSEVVTMTNNF--ERVLGKGGFGMVYHGTVNNTEQVAVKMLSHSSSQGYKEFKAEVELLLRVHHKNLVGLVGYCDEGENLALIYEYMANGDLREHMSG-KRGGSILNWETRLKIVVESAQGLEYLHNGCKPPMVHRDVKTTNILLNEHLHAKLADFGLSRSFPIEGETHVSTVVAGTPGYLDPEYYRTNWLNEKSDVYSFGIVLLEIITNQ 791          
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: CRK32_ARATH (Putative cysteine-rich receptor-like protein kinase 32 OS=Arabidopsis thaliana GN=CRK32 PE=2 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 2.050e-44
Identity = 94/221 (42.53%), Postives = 133/221 (60.18%), Query Frame = 2
Query:   59 FNYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAVKILKP-SEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKK----DP---AAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGRK 697
            F++  L +AT  F   N +GKGG  +VYKG LP+  E+AVK L   S    +EF  E+ I+  L HKN++ LLGFC E +  +LVY+F+   SL   L GNK+    DP   +   W  RY +  G+   L YLH  S   +IHRD+K+SNILL  D  P+++DFG+A+      +      V GTFGY+ PEY  +G+ + K DVY+FGV++LE++ G+K
Sbjct:  309 FDFMTLEAATDKFSRNNKLGKGGFGEVYKGMLPNETEVAVKRLSSNSGQGTQEFKNEVVIVAKLQHKNLVRLLGFCLERDEQILVYEFVPNKSLNYFLFGNKQKHLLDPTKKSQLDWKRRYNIIGGITRGLLYLHQDSRLTIIHRDIKASNILLDADMNPKIADFGMARNFRVDQTEDNTRRVVGTFGYMPPEYVTHGQFSTKSDVYSFGVLILEIVCGKK 529          
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: CRK30_ARATH (Putative cysteine-rich receptor-like protein kinase 30 OS=Arabidopsis thaliana GN=CRK30 PE=2 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 2.677e-44
Identity = 91/216 (42.13%), Postives = 136/216 (62.96%), Query Frame = 2
Query:   59 FNYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAVKILKPSEDVIK-EFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHG--NKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGRK 697
            F+ +D+ +ATSNFLA N IG+GG  +VYKG L +G E+AVK L  + D  + EF  E+ ++  L H+N++ LLGF  +    +LV++F+   SL+  L G  N        W+ RY +  G+   L YLH  S   +IHRD+K+SNILL  D  P+++DFG+A+      +  +   V GTFGY+ PEY  +G+ + K DVY+FGV++LE+++GRK
Sbjct:  334 FDIKDIEAATSNFLASNKIGQGGFGEVYKGTLSNGTEVAVKRLSRTSDQGELEFKNEVLLVAKLQHRNLVRLLGFALQGEEKILVFEFVPNKSLDYFLFGSTNPTKKGQLDWTRRYNIIGGITRGLLYLHQDSRLTIIHRDIKASNILLDADMNPKIADFGMARNFRDHQTEDSTGRVVGTFGYMPPEYVAHGQFSTKSDVYSFGVLILEIVSGRK 549          
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: LRKA3_ARATH (Lectin-domain containing receptor kinase A4.3 OS=Arabidopsis thaliana GN=LECRKA4.3 PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.496e-44
Identity = 95/217 (43.78%), Postives = 134/217 (61.75%), Query Frame = 2
Query:   59 FNYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGKE-LAVKILKP-SEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGN-KKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGRKP 700
            F Y+DL  AT  F    ++G GG   VY+G +    + +AVK + P S   ++EFV EIE +  L HKN+++L G+C   N+LLL+YD++  GSL+  L+   ++  A   W+ R+++A G+A  L YLH    Q VIHRDVK SN+L+  D  P+L DFGLA+     S   T T V GT GY+APE    G  +   DV+AFGV+LLE+++GRKP
Sbjct:  351 FRYRDLYKATEGFKENRVVGTGGFGIVYRGNIRSSSDQIAVKKITPNSMQGVREFVAEIESLGRLRHKNLVNLQGWCKHRNDLLLIYDYIPNGSLDSLLYSKPRRSGAVLSWNARFQIAKGIASGLLYLHEEWEQIVIHRDVKPSNVLIDSDMNPRLGDFGLARLYERGSQSCT-TVVVGTIGYMAPELARNGNSSSASDVFAFGVLLLEIVSGRKP 566          
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: CRK35_ARATH (Putative cysteine-rich receptor-like protein kinase 35 OS=Arabidopsis thaliana GN=CRK35 PE=3 SV=2)

HSP 1 Score: 178.333 bits (451), Expect = 3.496e-44
Identity = 93/217 (42.86%), Postives = 136/217 (62.67%), Query Frame = 2
Query:   59 FNYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAVKIL-KPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFG---WSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGRK 697
            F+++ + +AT  F   N+IG+GG  +VY+G L  G E+AVK L K S    +EF  E  +++ L HKN++ LLGFC E    +LVY+F+   SL+  L     DPA  G   W+ RY +  G+A  + YLH  S   +IHRD+K+SNILL  D  P+++DFG+A+      S      +AGTFGY++PEY M G  + K DVY+FGV++LE+++G+K
Sbjct:  333 FSFKTIEAATDKFSDSNMIGRGGFGEVYRGKLSSGPEVAVKRLSKTSGQGAEEFKNEAVLVSKLQHKNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLF----DPAKQGELDWTRRYNIIGGIARGILYLHQDSRLTIIHRDLKASNILLDADMNPKIADFGMARIFGVDQSQANTRRIAGTFGYMSPEYAMRGHFSMKSDVYSFGVLVLEIISGKK 545          
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: Y5241_ARATH (Probable receptor-like protein kinase At5g24010 OS=Arabidopsis thaliana GN=At5g24010 PE=1 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 4.566e-44
Identity = 87/212 (41.04%), Postives = 140/212 (66.04%), Query Frame = 2
Query:   62 NYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAVKILKP-SEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGR 694
            ++ +L S T+NF    +IG GG   V++G L D  ++AVK   P S   + EF+ EI I++ + H++++SL+G+C E + ++LVY+++ +G L+ +L+G+   P +  W +R +V +G A  L YLH+GS+Q +IHRD+KS+NILL +++  +++DFGL++           T V G+FGYL PEYF   ++ DK DVY+FGVVL E+L  R
Sbjct:  478 SFAELQSGTNNFDRSLVIGVGGFGMVFRGSLKDNTKVAVKRGSPGSRQGLPEFLSEITILSKIRHRHLVSLVGYCEEQSEMILVYEYMDKGPLKSHLYGSTNPPLS--WKQRLEVCIGAARGLHYLHTGSSQGIIHRDIKSTNILLDNNYVAKVADFGLSRSGPCIDETHVSTGVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCAR 687          
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: CRK10_ARATH (Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana GN=CRK10 PE=1 SV=2)

HSP 1 Score: 177.948 bits (450), Expect = 4.566e-44
Identity = 91/216 (42.13%), Postives = 139/216 (64.35%), Query Frame = 2
Query:   62 NYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAVKIL-KPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFG---WSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGRK 697
            +Y+ + +AT +F+  N IG+GG  +VYKG L DG E+AVK L K S     EF  E+ ++  L H+N++ LLGFC +    +LVY+++   SL+  L     DPA  G   W+ RYK+  GVA  + YLH  S   +IHRD+K+SNILL  D  P+++DFG+A+      +    + + GT+GY++PEY M+G+ + K DVY+FGV++LE+++G+K
Sbjct:  326 DYRTIQTATDDFVESNKIGQGGFGEVYKGTLSDGTEVAVKRLSKSSGQGEVEFKNEVVLVAKLQHRNLVRLLGFCLDGEERVLVYEYVPNKSLDYFLF----DPAKKGQLDWTRRYKIIGGVARGILYLHQDSRLTIIHRDLKASNILLDADMNPKIADFGMARIFGLDQTEENTSRIVGTYGYMSPEYAMHGQYSMKSDVYSFGVLVLEIISGKK 537          
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: SIRK_ARATH (Senescence-induced receptor-like serine/threonine-protein kinase OS=Arabidopsis thaliana GN=SIRK PE=2 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 5.963e-44
Identity = 88/215 (40.93%), Postives = 146/215 (67.91%), Query Frame = 2
Query:   53 RLFNYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAVKIL-KPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGR 694
            R F Y ++++ T+NF  E +IGKGG  +VY G + +G+++AVK+L + S    KEF  E++++  +HH N+ SL+G+C E N+++L+Y++++  +L + L G +       W ER K+++  A+ LEYLH+G    ++HRDVK +NILL++  + +++DFGL++  S   S    T VAG+ GYL PEY+   ++N+K DVY+ GVVLLE++TG+
Sbjct:  562 RYFKYSEVVNITNNF--ERVIGKGGFGKVYHGVI-NGEQVAVKVLSEESAQGYKEFRAEVDLLMRVHHTNLTSLVGYCNEINHMVLIYEYMANENLGDYLAGKRS--FILSWEERLKISLDAAQGLEYLHNGCKPPIVHRDVKPTNILLNEKLQAKMADFGLSRSFSVEGSGQISTVVAGSIGYLDPEYYSTRQMNEKSDVYSLGVVLLEVITGQ 771          
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: FEI2_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 2 OS=Arabidopsis thaliana GN=FEI2 PE=1 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 5.963e-44
Identity = 94/212 (44.34%), Postives = 135/212 (63.68%), Query Frame = 2
Query:   68 QDLLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAVK-ILKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGRKP 700
            +D++    +   E++IG GG   VYK  + DG   A+K I+K +E   + F  E+EI+ ++ H+ +++L G+C    + LL+YD+L  GSL+E LH   K      W  R  + +G A+ L YLH   + R+IHRD+KSSNILL  + E ++SDFGLAK      SHIT T VAGTFGYLAPEY   G+  +K DVY+FGV++LE+L+G+ P
Sbjct:  295 KDIIKKLESLNEEHIIGCGGFGTVYKLSMDDGNVFALKRIVKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLLYDYLPGGSLDEALH---KRGEQLDWDSRVNIIIGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHIT-TIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKLP 502          
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: CRK26_ARATH (Cysteine-rich receptor-like protein kinase 26 OS=Arabidopsis thaliana GN=CRK26 PE=2 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 5.963e-44
Identity = 96/229 (41.92%), Postives = 144/229 (62.88%), Query Frame = 2
Query:   29 HEKYSATCRLFNYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAVKIL-KPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLE----ENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTD-VAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGRK 697
            +E  S     F++  L  ATS+F  EN +G+GG   VYKG L DG+++AVK L K ++    EF  E  ++  L H+N++ LLG+  E    LLVY+FL   SL+    + + GN+ +     W  RYK+  GVA  L YLH  S  R+IHRD+K+SNILL ++  P+++DFG+A+      +    T+ + GTFGY+APEY M+G+ + K DVY+FGV++LE+++G+K
Sbjct:  322 NENISTDSMKFDFSVLQDATSHFSLENKLGEGGFGAVYKGVLSDGQKIAVKRLSKNAQQGETEFKNEFLLVAKLQHRNLVKLLGYSIEGTERLLVYEFLPHTSLDKFIFDPIQGNELE-----WEIRYKIIGGVARGLLYLHQDSRLRIIHRDLKASNILLDEEMTPKIADFGMARLFDIDHTTQRYTNRIVGTFGYMAPEYVMHGQFSFKTDVYSFGVLVLEIISGKK 545          
The following BLAST results are available for this feature:
BLAST of FC921346 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RLK6_ARATH2.050e-4440.93Receptor-like protein kinase At3g21340 OS=Arabidop... [more]
CRK32_ARATH2.050e-4442.53Putative cysteine-rich receptor-like protein kinas... [more]
CRK30_ARATH2.677e-4442.13Putative cysteine-rich receptor-like protein kinas... [more]
LRKA3_ARATH3.496e-4443.78Lectin-domain containing receptor kinase A4.3 OS=A... [more]
CRK35_ARATH3.496e-4442.86Putative cysteine-rich receptor-like protein kinas... [more]
Y5241_ARATH4.566e-4441.04Probable receptor-like protein kinase At5g24010 OS... [more]
CRK10_ARATH4.566e-4442.13Cysteine-rich receptor-like protein kinase 10 OS=A... [more]
SIRK_ARATH5.963e-4440.93Senescence-induced receptor-like serine/threonine-... [more]
FEI2_ARATH5.963e-4444.34LRR receptor-like serine/threonine-protein kinase ... [more]
CRK26_ARATH5.963e-4441.92Cysteine-rich receptor-like protein kinase 26 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionC32103H07EF RVDevelopN Citrus clementina cDNA clone C32103H07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921346 ID=FC921346; Name=FC921346; organism=Citrus clementina; type=EST; length=715bp
GGAACTGCCAAAAGAATTGGAAGGTCTTCATGAGAAATATTCGGCAACTT
GCAGATTGTTCAATTACCAGGATCTCCTCTCAGCAACATCTAATTTCTTG
GCCGAGAATCTGATAGGGAAAGGAGGCAGCAGTCAGGTTTACAAAGGTTG
CCTTCCTGATGGAAAGGAACTTGCAGTGAAAATCTTGAAGCCATCTGAAG
ATGTAATAAAAGAGTTTGTTTTGGAAATTGAGATTATTACTACATTACAT
CACAAAAACATTATTTCCCTTTTGGGATTCTGCTTTGAGGACAATAACCT
GCTCTTGGTTTATGATTTCCTCTCAAGGGGAAGCCTAGAAGAGAACCTTC
ATGGTAATAAGAAAGACCCGGCTGCATTTGGTTGGAGTGAGAGATATAAG
GTGGCTATGGGGGTGGCCGAAGCTCTTGAATATCTCCACAGTGGCAGTGC
TCAACGTGTGATCCACAGGGATGTTAAATCATCAAATATATTACTGTCAG
ATGACTTCGAGCCACAGCTATCTGATTTTGGACTTGCCAAGTGGGCATCA
ACCTCCTCATCTCATATAACCTGCACCGATGTTGCGGGAACCTTTGGCTA
CCTGGCTCCCGAGTACTTCATGTATGGAAAAGTAAATGACAAGATTGATG
TCTATGCATTTGGTGTTGTACTCCTTGAGCTTCTCACTGGAAGGAAGCCC
TATAAGCACGATCAT
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