FC921348

Overview
NameFC921348
Unique NameFC921348
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length733
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921348 vs. ExPASy Swiss-Prot
Match: ORYB_ORYSJ (Oryzain beta chain OS=Oryza sativa subsp. japonica GN=Os04g0670200 PE=1 SV=2)

HSP 1 Score: 177.178 bits (448), Expect = 8.165e-44
Identity = 100/246 (40.65%), Postives = 148/246 (60.16%), Query Frame = 2
Query:   44 MMLRNAVLSLFLLWVLGIPAGAWSEG---YPQKYDPQSMEE---------RFENWLKQYSREYGSED----EWQRRFGIYSSNVQYIDYINS---QNPSFKLTDNKFADLSNEEFISTYLGYN-KPYNEPSWPSVQYLG---LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSEXQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTN 712
            M  R A  +  LL ++G    A       Y  ++  + +EE          ++ WL +     GS +    E +RRF ++  N++++D  N+   +   F+L  N+FADL+NEEF +T+LG      +  +    ++ G   LP SVDWR++GAV PVK+QGQCGSCWAFSAV+ VE IN+L TG++++LSEQELV+C  N +  GCNGG M+ AF+FI K GG+ TEDDYPY+  + +C  ++ N
Sbjct:    1 MAARAAAAAFLLLLIVGAATAAPDMSIISYNAEHGARGLEEGPTEAEARAAYDLWLAENGG--GSPNALGGEHERRFLVFWDNLKFVDAHNARADERGGFRLGMNRFADLTNEEFRATFLGAKVAERSRAAGERYRHDGVEELPESVDWREKGAVAPVKNQGQCGSCWAFSAVSTVESINQLVTGEMITLSEQELVECSTNGQNSGCNGGLMDDAFDFIIKNGGIDTEDDYPYKAVDGKCDINREN 244          
BLAST of FC921348 vs. ExPASy Swiss-Prot
Match: CPR1_ARATH (Probable cysteine proteinase At3g19400 OS=Arabidopsis thaliana GN=At3g19400 PE=2 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 8.165e-44
Identity = 93/191 (48.69%), Postives = 120/191 (62.83%), Query Frame = 2
Query:  161 FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINS-QNPSFKLTDNKFADLSNEEFISTYLGYNKPYNEPSWPSVQYLG-----LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSEXQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKN-DRCQTDKTN 712
            +E WL +  + Y    E +RRF I+  N++++D  NS  + +F++   +FADL+NEEF + YL       + S  + +YL      LP  VDWR  GAV  VKDQG CGSCWAFSAV AVEGIN++ TG+L+SLSEQELVDCD      GC+GG M  AFEFI K GG+ T+ DYPY   +   C  DK N
Sbjct:   44 YEQWLVENRKNYNGLGEKERRFKIFKDNLKFVDEHNSVPDRTFEVGLTRFADLTNEEFRAIYLRKKMERTKDSVKTERYLYKEGDVLPDEVDWRANGAVVSVKDQGNCGSCWAFSAVGAVEGINQITTGELISLSEQELVDCDRGFVNAGCDGGIMNYAFEFIMKNGGIETDQDYPYNANDLGLCNADKNN 234          
BLAST of FC921348 vs. ExPASy Swiss-Prot
Match: GCP1_ARATH (Germination-specific cysteine protease 1 OS=Arabidopsis thaliana GN=GCP1 PE=2 SV=2)

HSP 1 Score: 176.792 bits (447), Expect = 1.066e-43
Identity = 94/203 (46.31%), Postives = 127/203 (62.56%), Query Frame = 2
Query:  152 EERFENWLKQYSREYGSED--------EWQRRFGIYSSNVQYIDYIN--SQNPSFKLTDNKFADLSNEEFISTYLGYN----------KPYNEPSWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSEXQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQT 700
            +E   +   Q+S E+G  +        +  +RF I+  N+++ID  N  ++N ++KL   KF DL+N+E+   YLG            K  N+    +V    +P +VDWR++GAV P+KDQG CGSCWAFS  AAVEGINK+ TG+L+SLSEQELVDCD  S  QGCNGG M+ AF+FI K GG+ TE DYPYRG   +C +
Sbjct:   42 DEEVRSIYLQWSAEHGKTNNNNNGIINDQDKRFNIFKDNLRFIDLHNEDNKNATYKLGLTKFTDLTNDEYRKLYLGARTEPARRIAKAKNVNQKYSAAVNGKEVPETVDWRQKGAVNPIKDQGTCGSCWAFSTTAAVEGINKIVTGELISLSEQELVDCD-KSYNQGCNGGLMDYAFQFIMKNGGLNTEKDYPYRGFGGKCNS 243          
BLAST of FC921348 vs. ExPASy Swiss-Prot
Match: PAPA3_CARPA (Caricain OS=Carica papaya PE=1 SV=2)

HSP 1 Score: 174.096 bits (440), Expect = 6.912e-43
Identity = 96/203 (47.29%), Postives = 126/203 (62.07%), Query Frame = 2
Query:  119 GYPQKYDPQSMEER----FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNPSFKLTDNKFADLSNEEFISTYLG------YNKPYNEPSWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSEXQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQ 697
            GY Q  D  +  ER    F +W+  +++ Y + DE   RF I+  N+ YID  N +N S+ L  N+FADLSN+EF   Y+G        + Y+E  + +   + LP +VDWRK+GAVTPV+ QG CGSCWAFSAVA VEGINK++TGKLV LSEQELVDC+  S   GC GGY   A E++ K  G+     YPY+ K   C+
Sbjct:   32 GYSQ--DDLTSTERLIQLFNSWMLNHNKFYENVDEKLYRFEIFKDNLNYIDETNKKNNSYWLGLNEFADLSNDEFNEKYVGSLIDATIEQSYDE-EFINEDTVNLPENVDWRKKGAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCERRS--HGCKGGYPPYALEYVAK-NGIHLRSKYPYKAKQGTCR 228          
BLAST of FC921348 vs. ExPASy Swiss-Prot
Match: CYSP4_BRANA (Cysteine proteinase COT44 (Fragment) OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.627e-42
Identity = 92/187 (49.20%), Postives = 119/187 (63.64%), Query Frame = 2
Query:  176 KQYSREYGSEDEWQRRFGIYSSNVQYIDYIN--SQNPSFKLTDNKFADLSNEEFISTYLGYN----------KPYNEPSWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSEXQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQT 700
            K  S   G  ++   RF I+  N+++ID  N  ++N ++KL    FA+L+N+E+ S YLG            K  N     +V    +P +VDWR++GAV  +KDQG CGSCWAFS  AAVEGINK+ TG+LVSLSEQELVDCD  S  QGCNGG M+ AF+FI K GG+ TE DYPY G N +C +
Sbjct:   13 KSNSNSNGIINQQDERFNIFKDNLRFIDLHNENNKNATYKLGLTIFANLTNDEYRSLYLGARTEPVRRITKAKNVNMKYSAAVNVDEVPVTVDWRQKGAVNAIKDQGTCGSCWAFSTAAAVEGINKIVTGELVSLSEQELVDCD-KSYNQGCNGGLMDYAFQFIMKNGGLNTEKDYPYHGTNGKCNS 198          
BLAST of FC921348 vs. ExPASy Swiss-Prot
Match: CYSP1_ORYSJ (Cysteine protease 1 OS=Oryza sativa subsp. japonica GN=CP1 PE=2 SV=2)

HSP 1 Score: 172.17 bits (435), Expect = 2.627e-42
Identity = 95/197 (48.22%), Postives = 124/197 (62.94%), Query Frame = 2
Query:  161 FENWLKQYSREYGSED------EWQRRFGIYSSNVQYIDYINS---QNPSFKLTDNKFADLSNEEFISTYLGYNKPYNEPSWPSVQYL-----GLPASVDWRKEGAVT-PVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSEXQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDK 706
            ++ WL ++ R  G         E +RRF ++  N++++D  N+   +   F+L  N+FADL+N EF +TYLG   P          Y       LP SVDWR +GAV  PVK+QGQCGSCWAFSAVAAVEGINK+ TG+LVSLSEQELV+C  N +  GCNGG M+ AF FI + GG+ TE+DYPY   + +C   K
Sbjct:   62 YDLWLARHRRGGGGGSRNGFIGEHERRFRVFWDNLKFVDAHNARADERGGFRLGMNRFADLTNGEFRATYLG-TTPAGRGRRVGEAYRHDGVEALPDSVDWRDKGAVVAPVKNQGQCGSCWAFSAVAAVEGINKIVTGELVSLSEQELVECARNGQNSGCNGGIMDDAFAFIARNGGLDTEEDYPYTAMDGKCNLAK 257          
BLAST of FC921348 vs. ExPASy Swiss-Prot
Match: CYSP_HEMSP (Thiol protease SEN102 OS=Hemerocallis sp. GN=SEN102 PE=2 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 3.431e-42
Identity = 93/180 (51.67%), Postives = 119/180 (66.11%), Query Frame = 2
Query:  206 DEWQRRFGIYSSNVQYIDYINSQNPS-FKLTDNKFADLSNEEFISTYLGYNKPY---------NEPSWPSVQYLGLPA-SVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSEXQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTN 712
            DE  RRF ++  NV++I   N +  + +KL  NKF D++N+EF S Y G    +         N  S+       LPA S+DWR +GAVT VKDQGQCGSCWAFS +A+VEGIN++KTG+LVSLSEQELVDCD  S  +GCNGG M+ AFEFI K  G+TTED YPY  ++  C ++  N
Sbjct:   54 DEKNRRFNVFKENVKFIHEFNQKKDAPYKLALNKFGDMTNQEFRSKYAGSKIQHHRSQRGIQKNTGSFMYENVGSLPAASIDWRAKGAVTGVKDQGQCGSCWAFSTIASVEGINQIKTGELVSLSEQELVDCD-TSYNEGCNGGLMDYAFEFIQK-NGITTEDSYPYAEQDGTCASNLLN 231          
BLAST of FC921348 vs. ExPASy Swiss-Prot
Match: ANAN_ANACO (Ananain OS=Ananas comosus GN=AN1 PE=1 SV=2)

HSP 1 Score: 171.014 bits (432), Expect = 5.852e-42
Identity = 93/219 (42.47%), Postives = 134/219 (61.19%), Query Frame = 2
Query:   65 LSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNP-SFKLTDNKFADLSNEEFISTYLGYNKPYN---EP--SWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSEXQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTD 703
            L LFL  +   P+ A  +   +  DP  M ++FE W+ +Y R Y   DE   RF I+ +NV +I+  N++N  S+ L  N+F D++N EF++ Y G + P N   EP  S+  V    +P S+DWR  GAVT VK+QG+CGSCWAF+++A VE I K+K G LVSLSEQ+++DC V+    GC GG++ KA+ FI    GV +   YPY+     C+T+
Sbjct:   10 LFLFLCVMWASPSAASCD---EPSDP--MMKQFEEWMAEYGRVYKDNDEKMLRFQIFKNNVNHIETFNNRNGNSYTLGINQFTDMTNNEFVAQYTGLSLPLNIKREPVVSFDDVDISSVPQSIDWRDSGAVTSVKNQGRCGSCWAFASIATVESIYKIKRGNLVSLSEQQVLDCAVS---YGCKGGWINKAYSFIISNKGVASAAIYPYKAAKGTCKTN 220          
BLAST of FC921348 vs. ExPASy Swiss-Prot
Match: PAPA2_CARPA (Chymopapain OS=Carica papaya PE=1 SV=2)

HSP 1 Score: 168.318 bits (425), Expect = 3.793e-41
Identity = 94/213 (44.13%), Postives = 130/213 (61.03%), Query Frame = 2
Query:  101 AGAWSEGYPQKYDPQSME---ERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNPSFKLTDNKFADLSNEEFISTYLGYN-------KPYNEPSWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSEXQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQ-TDK 706
            A  ++ GY Q  D  S+E   + F++W+ ++++ Y S DE   RF I+  N+ YID  N +N S+ L  N FADLSN+EF   Y+G+        + ++   +        P S+DWR +GAVTPVK+QG CGSCWAFS +A VEGINK+ TG L+ LSEQELVDCD +S   GC GGY   + +++    GV T   YPY+ K  +C+ TDK
Sbjct:   26 ADFYTVGYSQD-DLTSIERLIQLFDSWMLKHNKIYESIDEKIYRFEIFRDNLMYIDETNKKNNSYWLGLNGFADLSNDEFKKKYVGFVAEDFTGLEHFDNEDFTYKHVTNYPQSIDWRAKGAVTPVKNQGACGSCWAFSTIATVEGINKIVTGNLLELSEQELVDCDKHS--YGCKGGYQTTSLQYVAN-NGVHTSKVYPYQAKQYKCRATDK 234          
BLAST of FC921348 vs. ExPASy Swiss-Prot
Match: CYSP_PEA (Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 3.793e-41
Identity = 85/200 (42.50%), Postives = 120/200 (60.00%), Query Frame = 2
Query:  152 EERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNPSFKLTDNKFADLSNEEFISTYLGYNK----PYNEPSWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCD-------VNSEXQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTNIM 718
            E  F ++  ++S+ Y +++E   RFG++ SN+       +++P+ +    KF+DL+  EF   +LG  K    P +    P +    LP   DWR++GAVTPVKDQG CGSCWAFS   A+EG + L TGKLVSLSEQ+LVDCD         S   GCNGG M  AFE++ + GGV  E DY Y G++  C+ DK+ ++
Sbjct:   45 EHHFTSFKSKFSKSYATKEEHDYRFGVFKSNLIKAKLHQNRDPTAEHGITKFSDLTASEFRRQFLGLKKRLRLPAHAQKAPILPTTNLPEDFDWREKGAVTPVKDQGSCGSCWAFSTTGALEGAHYLATGKLVSLSEQQLVDCDHVCDPEQAGSCDSGCNGGLMNNAFEYLLESGGVVQEKDYAYTGRDGSCKFDKSKVV 244          
The following BLAST results are available for this feature:
BLAST of FC921348 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 164
Match NameE-valueIdentityDescription
ORYB_ORYSJ8.165e-4440.65Oryzain beta chain OS=Oryza sativa subsp. japonica... [more]
CPR1_ARATH8.165e-4448.69Probable cysteine proteinase At3g19400 OS=Arabidop... [more]
GCP1_ARATH1.066e-4346.31Germination-specific cysteine protease 1 OS=Arabid... [more]
PAPA3_CARPA6.912e-4347.29Caricain OS=Carica papaya PE=1 SV=2[more]
CYSP4_BRANA2.627e-4249.20Cysteine proteinase COT44 (Fragment) OS=Brassica n... [more]
CYSP1_ORYSJ2.627e-4248.22Cysteine protease 1 OS=Oryza sativa subsp. japonic... [more]
CYSP_HEMSP3.431e-4251.67Thiol protease SEN102 OS=Hemerocallis sp. GN=SEN10... [more]
ANAN_ANACO5.852e-4242.47Ananain OS=Ananas comosus GN=AN1 PE=1 SV=2[more]
PAPA2_CARPA3.793e-4144.13Chymopapain OS=Carica papaya PE=1 SV=2[more]
CYSP_PEA3.793e-4142.50Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC32103H09EF RVDevelopN Citrus clementina cDNA clone C32103H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921348 ID=FC921348; Name=FC921348; organism=Citrus clementina; type=EST; length=733bp
GATCTATACTAATCTACATCTCAAGATAGCAATAGATATGCGCATGATGT
TGAGAAATGCTGTGCTATCTCTTTTTCTTTTGTGGGTTCTCGGGATACCT
GCAGGGGCATGGTCAGAGGGCTATCCACAAAAGTACGACCCACAATCCAT
GGAGGAGAGGTTCGAAAACTGGCTAAAACAATATAGCCGAGAGTATGGGA
GTGAAGATGAATGGCAACGGCGATTTGGAATCTACTCGTCCAATGTTCAG
TACATTGACTACATCAATTCTCAAAACCCATCATTCAAGCTAACAGACAA
TAAATTTGCAGACCTGTCAAATGAAGAGTTCATTTCTACCTACTTGGGAT
ATAATAAACCGTACAACGAACCAAGTTGGCCAAGCGTACAATATTTGGGT
TTGCCAGCTAGCGTAGATTGGAGAAAGGAAGGTGCTGTAACTCCAGTCAA
AGATCAAGGCCAATGTGGAAGTTGTTGGGCGTTCTCTGCAGTGGCAGCTG
TGGAAGGCATCAACAAATTAAAAACAGGAAAATTGGTATCTCTGTCAGAG
CAGGAATTGGTGGACTGTGATGTTAACAGCGAANACCAAGGCTGCAATGG
TGGATACATGGAGAAAGCATTTGAATTCATCACAAAGATTGGTGGAGTCA
CCACAGAGGATGATTATCCTTACAGAGGCAAAAATGACCGCTGTCAGACA
GATAAAACAAACATCATGCAGTGACCATACTGG
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