FC921348

Overview
NameFC921348
Unique NameFC921348
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length733
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921348 vs. ExPASy Swiss-Prot
Match: CATL1_HUMAN (Cathepsin L1 OS=Homo sapiens GN=CTSL1 PE=1 SV=2)

HSP 1 Score: 154.066 bits (388), Expect = 7.402e-37
Identity = 78/190 (41.05%), Postives = 113/190 (59.47%), Query Frame = 2
Query:  146 SMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ----NPSFKLTDNKFADLSNEEFISTYLGYN--KPYNEPSWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSEXQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQ 697
            S+E ++  W   ++R YG  +E  RR  ++  N++ I+  N +      SF +  N F D+++EEF     G+   KP     +    +   P SVDWR++G VTPVK+QGQCGSCWAFSA  A+EG    KTG+L+SLSEQ LVDC      +GCNGG M+ AF+++   GG+ +E+ YPY    + C+
Sbjct:   24 SLEAQWTKWKAMHNRLYGMNEEGWRR-AVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKPRKGKVFQEPLFYEAPRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCK 212          
BLAST of FC921348 vs. ExPASy Swiss-Prot
Match: CATL1_CANFA (Cathepsin L1 OS=Canis familiaris GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 7.402e-37
Identity = 91/218 (41.74%), Postives = 125/218 (57.34%), Query Frame = 2
Query:   68 SLFLLWV-LGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ----NPSFKLTDNKFADLSNEEFISTYLGYN-------KPYNEPSWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSEXQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKN 685
            SLFL  + LGI + A       K+D QS+  ++  W   + R YG  +E  RR  ++  N++ I+  N +       F +  N F D++NEEF     G+        K + EP +  +     P SVDWR++G VTPVK+QGQCGSCWAFSA  A+EG    KTGKLVSLSEQ LVDC      +GCNGG M+ AF ++   GG+ +E+ YPY G++
Sbjct:    4 SLFLTALCLGIASAA------PKFD-QSLNAQWYQWKATHRRLYGMNEEGWRR-AVWEKNMKMIELHNREYSQGKHGFTMAMNAFGDMTNEEFRQVMNGFQNQKHKKGKMFQEPLFAEI-----PKSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRAQGNEGCNGGLMDNAFRYVKDNGGLDSEESYPYLGRD 208          
BLAST of FC921348 vs. ExPASy Swiss-Prot
Match: CPR2_ARATH (Probable cysteine proteinase At3g43960 OS=Arabidopsis thaliana GN=At3g43960 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 9.668e-37
Identity = 89/223 (39.91%), Postives = 131/223 (58.74%), Query Frame = 2
Query:   38 MRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ-NPSFKLTDNKFADLSNEEFISTYLGYNKPYNEPSWPSVQYLG-----LPASVDWRKEGAVTP-VKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSEXQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKN 685
            M +  R   L    + ++ I  G  +    Q+ + + +   +E WL +  + Y    E +RRF I+  N++ I+  NS  N S++   NKF+DL+ +EF ++YLG        S  + +Y       LP  VDWR+ GAV P VK QG+CGSCWAF+A  AVEGIN++ TG+LVSLSEQEL+DCD  ++  GC GG    AFEFI + GG+ +++ Y Y G++
Sbjct:    1 MAISFRTLALLTLSVLLISISLGVVTATESQRNEGEVLT-MYEQWLVENGKNYNGLGEKERRFKIFKDNLKRIEEHNSDPNRSYERGLNKFSDLTADEFQASYLGGKMEKKSLSDVAERYQYKEGDVLPDEVDWRERGAVVPRVKRQGECGSCWAFAATGAVEGINQITTGELVSLSEQELIDCDRGNDNFGCAGGGAVWAFEFIKENGGIVSDEVYGYTGED 222          
BLAST of FC921348 vs. ExPASy Swiss-Prot
Match: CATL1_BOVIN (Cathepsin L1 OS=Bos taurus GN=CTSL1 PE=1 SV=3)

HSP 1 Score: 153.68 bits (387), Expect = 9.668e-37
Identity = 86/193 (44.56%), Postives = 114/193 (59.07%), Query Frame = 2
Query:  131 KYDPQSMEERFENWLKQYSREYG-SEDEWQRRFGIYSSNVQYIDYINSQ----NPSFKLTDNKFADLSNEEFISTYLGYN-------KPYNEPSWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSEXQGCNGGYMEKAFEFITKIGGVTTEDDYPY 673
            K DP +++  +  W   + R YG +E+EW+R   ++  N + ID  N +       F++  N F D++NEEF     G+        K ++EP    V     P SVDW K+G VTPVK+QGQCGSCWAFSA  A+EG    KTGKLVSLSEQ LVDC      QGCNGG M+ AF++I   GG+ +E+ YPY
Sbjct:   20 KLDP-NLDAHWHQWKATHRRLYGMNEEEWRR--AVWEKNKKIIDLHNQEYSEGKHGFRMAMNAFGDMTNEEFRQVMNGFQNQKHKKGKLFHEPLLVDV-----PKSVDWTKKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRAQGNQGCNGGLMDNAFQYIKDNGGLDSEESYPY 204          
BLAST of FC921348 vs. ExPASy Swiss-Prot
Match: CYSP7_DICDI (Cysteine proteinase 7 OS=Dictyostelium discoideum GN=cprG PE=1 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.649e-36
Identity = 82/191 (42.93%), Postives = 113/191 (59.16%), Query Frame = 2
Query:  161 FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNPSFKLTDNKFADLSNEEFISTYLGYNKPYNEPSWP---SVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGK--LVSLSEQELVDCDVNSEXQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKN-DRCQTDKTNI 715
            F NW+  + R Y SE E+  R+ I+ +N+ Y++  N++     L  N FAD+SNEE+ +TYLG   P++  S     S +     A VDWR +GAVTP+K+QGQCG CW+FS   A EG   L  GK  LVSLSEQ L+DC  +    GC GG M  AFE+I    G+ TE  YPY  ++  +C+ +  N+
Sbjct:   30 FTNWMIAHQRHYSSE-EFNGRYNIFKANMDYVNEWNTKGSETVLGLNVFADISNEEYRATYLG--TPFDASSLEMTESDKIFDASAQVDWRTQGAVTPIKNQGQCGGCWSFSTTGATEGAQYLANGKKNLVSLSEQNLIDCSGSYGNNGCEGGLMTLAFEYIINNKGIDTESSYPYTAEDGKKCKFNPKNV 217          
BLAST of FC921348 vs. ExPASy Swiss-Prot
Match: CFAD_DICDI (Counting factor associated protein D OS=Dictyostelium discoideum GN=cfaD PE=1 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.649e-36
Identity = 78/192 (40.62%), Postives = 119/192 (61.98%), Query Frame = 2
Query:  161 FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNPSFKLTDNKFADLSNEEFIS---------TYLGYNKPYNEPSWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSEXQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKT 709
            F+ +  QY++EY S+DE   RF  + +  + I   N++  S+KL  N +ADLSN+EF +         +  G +  +++ S  S+     P++VDWR +  VTPVKDQG CGSCW F +  ++EG N +  G+LVSLSEQ+LVDC + +  QGC GG+   AF+++ +IG + TE +YPY  +N  C+ D+T
Sbjct:  225 FKEYKAQYNKEYSSQDEHDERFINFKAARKIIATHNAKESSYKLGMNHYADLSNKEFNTLVKPKVARPSVTGADSVHDDESLRSI-----PSTVDWRNQNCVTPVKDQGICGSCWTFGSTGSLEGTNCVTNGELVSLSEQQLVDCAILTGSQGCGGGFASSAFQYVMEIGSLATESNYPYLMQNGLCR-DRT 410          
BLAST of FC921348 vs. ExPASy Swiss-Prot
Match: CATV_NPVAC (Viral cathepsin OS=Autographa californica nuclear polyhedrosis virus GN=VCATH PE=1 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.154e-36
Identity = 86/221 (38.91%), Postives = 123/221 (55.66%), Query Frame = 2
Query:   71 LFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNPSFKLTDNKFADLSNEEFISTYLGYNKPYNEPSWPSVQYLGLPAS-----VDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSEXQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTNIM 718
            LF L+V G+   A        YD       FE ++ +++++YGSE E  RRF I+  N+  I   N QN S K   NKF+DLS +E I+ Y G + P    ++  V  L  P        DWR+   VT VK+QG CG+CWAF+ +A++E    +K  +L++LSEQ+++DCD      GCNGG +  AFE I K+GGV  E DYPY   N+ C+ +    +
Sbjct:    5 LFYLFVYGVVNSA-------AYDLLKAPNYFEEFVHRFNKDYGSEVEKLRRFKIFQHNLNEIINKN-QNDSAKYEINKFSDLSKDETIAKYTGLSLPIQTQNFCKVIVLDQPPGKGPLEFDWRRLNKVTSVKNQGMCGACWAFATLASLESQFAIKHNQLINLSEQQMIDCDF--VDAGCNGGLLHTAFEAIIKMGGVQLESDYPYEADNNNCRMNSNKFL 215          
BLAST of FC921348 vs. ExPASy Swiss-Prot
Match: CATK_MACMU (Cathepsin K OS=Macaca mulatta GN=CTSK PE=1 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.813e-36
Identity = 84/202 (41.58%), Postives = 119/202 (58.91%), Query Frame = 2
Query:  134 YDPQSMEERFENWLKQYSREYGSE-DEWQRRFGIYSSNVQYIDYINSQNP----SFKLTDNKFADLSNEEFISTYLGYNKPYNEPSWPSVQYLG-----LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSEXQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKT 709
            Y  + ++  +E W K + ++Y S+ DE  RR  I+  N++YI   N +      +++L  N   D++NEE +    G   P +        Y+       P SVD+RK+G VTPVK+QGQCGSCWAFS+V A+EG  K KTGKL++LS Q LVDC   SE  GC GGYM  AF+++ K  G+ +ED YPY G+ + C  + T
Sbjct:   17 YPEEILDTHWELWKKTHRKQYNSKVDEISRRL-IWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTNEEVVQKMTGLKVPASHSRSNDTLYIPDWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDC--VSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCMYNPT 215          
BLAST of FC921348 vs. ExPASy Swiss-Prot
Match: CATK_MACFA (Cathepsin K OS=Macaca fascicularis GN=CTSK PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.813e-36
Identity = 84/202 (41.58%), Postives = 119/202 (58.91%), Query Frame = 2
Query:  134 YDPQSMEERFENWLKQYSREYGSE-DEWQRRFGIYSSNVQYIDYINSQNP----SFKLTDNKFADLSNEEFISTYLGYNKPYNEPSWPSVQYLG-----LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSEXQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKT 709
            Y  + ++  +E W K + ++Y S+ DE  RR  I+  N++YI   N +      +++L  N   D++NEE +    G   P +        Y+       P SVD+RK+G VTPVK+QGQCGSCWAFS+V A+EG  K KTGKL++LS Q LVDC   SE  GC GGYM  AF+++ K  G+ +ED YPY G+ + C  + T
Sbjct:   17 YPEEILDTHWELWKKTHRKQYNSKVDEISRRL-IWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTNEEVVQKMTGLKVPASHSRSNDTLYIPDWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDC--VSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCMYNPT 215          
BLAST of FC921348 vs. ExPASy Swiss-Prot
Match: CATH_BOVIN (Cathepsin H OS=Bos taurus GN=CTSH PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.813e-36
Identity = 86/208 (41.35%), Postives = 126/208 (60.58%), Query Frame = 2
Query:  101 AGAWSEGYPQ----KYDPQSMEE-RFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNPSFKLTDNKFADLSNEEFISTYLGYNKPYNEPSWPSVQYLGL---PASVDWRKEGA-VTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSEXQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQ 697
            AGAW  G P     +    S+E+  F++W+ Q+ ++Y SE E+  R   ++SN++ I+  N++N +FK+  N+F+D+S +E    YL +++P N  +  S    G    P S+DWRK+G  VTPVK+QG CGSCW FS   A+E    + TGKL  L+EQ+LVDC  N    GC GG   +AFE+I    G+  ED YPYRG++  C+
Sbjct:   10 AGAWLLGAPACGAAELAANSLEKFHFQSWMVQHQKKYSSE-EYYHRLQAFASNLREINAHNARNHTFKMGLNQFSDMSFDELKRKYL-WSEPQNCSATKSNYLRGTGPYPPSMDWRKKGNFVTPVKNQGSCGSCWTFSTTGALESAVAIATGKLPFLAEQQLVDCAQNFNNHGCQGGLPSQAFEYIRYNKGIMGEDTYPYRGQDGDCK 215          
The following BLAST results are available for this feature:
BLAST of FC921348 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 164
Match NameE-valueIdentityDescription
CATL1_HUMAN7.402e-3741.05Cathepsin L1 OS=Homo sapiens GN=CTSL1 PE=1 SV=2[more]
CATL1_CANFA7.402e-3741.74Cathepsin L1 OS=Canis familiaris GN=CTSL1 PE=2 SV=... [more]
CPR2_ARATH9.668e-3739.91Probable cysteine proteinase At3g43960 OS=Arabidop... [more]
CATL1_BOVIN9.668e-3744.56Cathepsin L1 OS=Bos taurus GN=CTSL1 PE=1 SV=3[more]
CYSP7_DICDI1.649e-3642.93Cysteine proteinase 7 OS=Dictyostelium discoideum ... [more]
CFAD_DICDI1.649e-3640.63Counting factor associated protein D OS=Dictyostel... [more]
CATV_NPVAC2.154e-3638.91Viral cathepsin OS=Autographa californica nuclear ... [more]
CATK_MACMU2.813e-3641.58Cathepsin K OS=Macaca mulatta GN=CTSK PE=1 SV=1[more]
CATK_MACFA2.813e-3641.58Cathepsin K OS=Macaca fascicularis GN=CTSK PE=2 SV... [more]
CATH_BOVIN2.813e-3641.35Cathepsin H OS=Bos taurus GN=CTSH PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC32103H09EF RVDevelopN Citrus clementina cDNA clone C32103H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921348 ID=FC921348; Name=FC921348; organism=Citrus clementina; type=EST; length=733bp
GATCTATACTAATCTACATCTCAAGATAGCAATAGATATGCGCATGATGT
TGAGAAATGCTGTGCTATCTCTTTTTCTTTTGTGGGTTCTCGGGATACCT
GCAGGGGCATGGTCAGAGGGCTATCCACAAAAGTACGACCCACAATCCAT
GGAGGAGAGGTTCGAAAACTGGCTAAAACAATATAGCCGAGAGTATGGGA
GTGAAGATGAATGGCAACGGCGATTTGGAATCTACTCGTCCAATGTTCAG
TACATTGACTACATCAATTCTCAAAACCCATCATTCAAGCTAACAGACAA
TAAATTTGCAGACCTGTCAAATGAAGAGTTCATTTCTACCTACTTGGGAT
ATAATAAACCGTACAACGAACCAAGTTGGCCAAGCGTACAATATTTGGGT
TTGCCAGCTAGCGTAGATTGGAGAAAGGAAGGTGCTGTAACTCCAGTCAA
AGATCAAGGCCAATGTGGAAGTTGTTGGGCGTTCTCTGCAGTGGCAGCTG
TGGAAGGCATCAACAAATTAAAAACAGGAAAATTGGTATCTCTGTCAGAG
CAGGAATTGGTGGACTGTGATGTTAACAGCGAANACCAAGGCTGCAATGG
TGGATACATGGAGAAAGCATTTGAATTCATCACAAAGATTGGTGGAGTCA
CCACAGAGGATGATTATCCTTACAGAGGCAAAAATGACCGCTGTCAGACA
GATAAAACAAACATCATGCAGTGACCATACTGG
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