FC921348

Overview
NameFC921348
Unique NameFC921348
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length733
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921348 vs. ExPASy Swiss-Prot
Match: CATL1_PIG (Cathepsin L1 OS=Sus scrofa GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.674e-36
Identity = 91/220 (41.36%), Postives = 124/220 (56.36%), Query Frame = 2
Query:   68 SLFLLWV-LGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ----NPSFKLTDNKFADLSNEEFISTYLGYNKPYNEPS--WPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSEXQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDK 706
            SLFL  + LGI + A       K D Q+++  +  W   + R YG  +E  RR  ++  N++ I+  N +       F +  N F D++NEEF     G+    ++    +     L +P SVDWR++G VT VK+QGQCGSCWAFSA  A+EG    KTGKLVSLSEQ LVDC      QGCNGG M+ AF+++   GG+ TE+ YPY G+     T K
Sbjct:    4 SLFLTALCLGIASAA------PKLD-QNLDADWYKWKATHGRLYGMNEEGWRR-AVWEKNMKMIELHNQEYSQGKHGFSMAMNAFGDMTNEEFRQVMNGFQNQKHKKGKVFHESLVLEVPKSVDWREKGYVTAVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRPQGNQGCNGGLMDNAFQYVKDNGGLDTEESYPYLGRETNSCTYK 215          
BLAST of FC921348 vs. ExPASy Swiss-Prot
Match: CATK_BOVIN (Cathepsin K OS=Bos taurus GN=CTSK PE=2 SV=2)

HSP 1 Score: 151.369 bits (381), Expect = 4.798e-36
Identity = 83/202 (41.09%), Postives = 121/202 (59.90%), Query Frame = 2
Query:  134 YDPQSMEERFENWLKQYSREYGSE-DEWQRRFGIYSSNVQYIDYINSQNP----SFKLTDNKFADLSNEEFISTYLGYNKPYNEPSWPSVQYLG-----LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSEXQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKT 709
            Y  + ++ ++E W K Y ++Y S+ DE  RR  I+  N+++I   N +      +++L  N   D+++EE +    G   P +        Y+       P SVD+RK+G VTPVK+QGQCGSCWAFS+V A+EG  K KTGKL++LS Q LVDC   SE  GC GGYM  AF+++ K  G+ +ED YPY G+++ C  + T
Sbjct:   17 YPEEILDTQWELWKKTYRKQYNSKGDEISRRL-IWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPASRSRSNDTLYIPDWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDC--VSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQDENCMYNPT 215          
BLAST of FC921348 vs. ExPASy Swiss-Prot
Match: CATH_PIG (Cathepsin H OS=Sus scrofa GN=CTSH PE=1 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 6.266e-36
Identity = 90/224 (40.18%), Postives = 131/224 (58.48%), Query Frame = 2
Query:   59 AVLSLFLL--WVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNPSFKLTDNKFADLSNEEFISTYLGYNKPYNEPSWPSVQYLGL---PASVDWRKEGA-VTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSEXQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRC--QTDK 706
            AVLSL     W+LG PA   S      ++    +  F++W+ Q+ ++Y  E E+  R  ++ SN + I+  N+ N +FKL  N+F+D+S +E    YL +++P N  +       G    P S+DWRK+G  V+PVK+QG CGSCW FS   A+E    + TGK++SL+EQ+LVDC  N    GC GG   +AFE+I    G+  ED YPY+G++D C  Q DK
Sbjct:    3 AVLSLLCAGAWLLGPPACGASNLAVSSFE----KLHFKSWMVQHQKKYSLE-EYHHRLQVFVSNWRKINAHNAGNHTFKLGLNQFSDMSFDEIRHKYL-WSEPQNCSATKGNYLRGTGPYPPSMDWRKKGNFVSPVKNQGSCGSCWTFSTTGALESAVAIATGKMLSLAEQQLVDCAQNFNNHGCQGGLPSQAFEYIRYNKGIMGEDTYPYKGQDDHCKFQPDK 220          
BLAST of FC921348 vs. ExPASy Swiss-Prot
Match: CYSP2_HOMAM (Digestive cysteine proteinase 2 OS=Homarus americanus GN=LCP2 PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 8.184e-36
Identity = 79/192 (41.15%), Postives = 112/192 (58.33%), Query Frame = 2
Query:  161 FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ----NPSFKLTDNKFADLSNEEFISTYLGYNKPYNEPS---WPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSEXQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTNI 715
            +E++  +Y R+Y   +E   R  I+  N +YI+  N +      +F L  NKF D++ EEF +   G     + P    +P  +       VDWR +GAVTPVKDQGQCGSCWAFS   ++EG + LKTG L+SL+EQ+LVDC      QGCNGG+M  AF++I    G+ TE  YPY  ++  C+ D  ++
Sbjct:   20 WEHFKGKYGRQYVDAEEDSYRRVIFEQNQKYIEEFNKKYENGEVTFNLAMNKFGDMTLEEFNAVMKGNIPRRSAPVSVFYPKKETGPQATEVDWRTKGAVTPVKDQGQCGSCWAFSTTGSLEGQHFLKTGSLISLAEQQLVDCSRPYGPQGCNGGWMNDAFDYIKANNGIDTEAAYPYEARDGSCRFDSNSV 211          
BLAST of FC921348 vs. ExPASy Swiss-Prot
Match: CATL_SARPE (Cathepsin L OS=Sarcophaga peregrina PE=1 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 8.184e-36
Identity = 83/203 (40.89%), Postives = 112/203 (55.17%), Query Frame = 2
Query:  149 MEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ----NPSFKLTDNKFADLSNEEFISTYLGYNKPYNE----------PSWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSEXQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTNI 715
            ++E +  +  Q+ + Y +E E + R  I++ N   I   N        S+KL  NK+AD+ + EF  T  GYN    +           ++    ++ +P SVDWR+ GAVT VKDQG CGSCWAFS+  A+EG +  K G LVSLSEQ LVDC       GCNGG M+ AF +I   GG+ TE  YPY G +D C  +K  I
Sbjct:   24 IKEEWHTYKLQHRKNYANEVEERFRMKIFNENRHKIAKHNQLFAQGKVSYKLGLNKYADMLHHEFKETMNGYNHTLRQLMRERTGLVGATYIPPAHVTVPKSVDWREHGAVTGVKDQGHCGSCWAFSSTGALEGQHFRKAGVLVSLSEQNLVDCSTKYGNNGCNGGLMDNAFRYIKDNGGIDTEKSYPYEGIDDSCHFNKATI 226          
BLAST of FC921348 vs. ExPASy Swiss-Prot
Match: CATK_PIG (Cathepsin K OS=Sus scrofa GN=CTSK PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 8.184e-36
Identity = 82/202 (40.59%), Postives = 121/202 (59.90%), Query Frame = 2
Query:  134 YDPQSMEERFENWLKQYSREYGSE-DEWQRRFGIYSSNVQYIDYINSQNP----SFKLTDNKFADLSNEEFISTYLGYNKPYNEPSWPSVQYLG-----LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSEXQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKT 709
            Y  + ++ ++E W K Y ++Y S+ DE  RR  I+  N+++I   N +      +++L  N   D+++EE +    G   P +        Y+       P S+D+RK+G VTPVK+QGQCGSCWAFS+V A+EG  K KTGKL++LS Q LVDC   SE  GC GGYM  AF+++ K  G+ +ED YPY G+++ C  + T
Sbjct:   18 YPEEILDTQWELWKKTYRKQYNSKVDEISRRL-IWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPPSHSRSNDTLYIPDWEGRTPDSIDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDC--VSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQDENCMYNPT 216          
BLAST of FC921348 vs. ExPASy Swiss-Prot
Match: CATK_CANFA (Cathepsin K OS=Canis familiaris GN=CTSK PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 8.184e-36
Identity = 84/206 (40.78%), Postives = 122/206 (59.22%), Query Frame = 2
Query:  134 YDPQSMEERFENWLKQYSREYGSE-DEWQRRFGIYSSNVQYIDYINSQNP----SFKLTDNKFADLSNEEFISTYLGYNKPYNE---------PSWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSEXQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKT 709
            Y  + ++ +++ W K Y ++Y S+ DE  RR  I+  N+++I   N +      +++L  N   D+++EE +    G   P +          P W S      P SVD+RK+G VTPVK+QGQCGSCWAFS+V A+EG  K KTGKL++LS Q LVDC   SE  GC GGYM  AF+++ K  G+ +ED YPY G+++ C  + T
Sbjct:   18 YPEEILDTQWDLWKKTYRKQYNSKVDELSRRL-IWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPPSHSRSNDTLYIPDWES----RAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDC--VSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQDESCMYNPT 216          
BLAST of FC921348 vs. ExPASy Swiss-Prot
Match: CATL2_BOVIN (Cathepsin L2 OS=Bos taurus GN=CTSL2 PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.069e-35
Identity = 85/193 (44.04%), Postives = 113/193 (58.55%), Query Frame = 2
Query:  131 KYDPQSMEERFENWLKQYSREYG-SEDEWQRRFGIYSSNVQYIDYINSQ----NPSFKLTDNKFADLSNEEFISTYLGYN-------KPYNEPSWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSEXQGCNGGYMEKAFEFITKIGGVTTEDDYPY 673
            K DP +++  +  W   + R YG +E+EW+R   ++  N + ID  N +       F++  N F D++NEEF     G+        K ++EP    V     P SVDW K+G VTPVK+QGQCGSCWAFSA  A+EG    KTGKLVSLSEQ LVDC      QGCNGG M+ AF++I   G + +E+ YPY
Sbjct:   20 KLDP-NLDAHWHQWKATHRRLYGMNEEEWRR--AVWEKNKKIIDLHNQEYSEGKHGFRMAMNAFGDMTNEEFRQVMNGFQNQKHKKGKLFHEPLLVDV-----PKSVDWTKKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRAQGNQGCNGGLMDNAFQYIKDNGCLDSEESYPY 204          
BLAST of FC921348 vs. ExPASy Swiss-Prot
Match: CYSP2_MAIZE (Cysteine proteinase 2 OS=Zea mays GN=CCP2 PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.396e-35
Identity = 78/190 (41.05%), Postives = 112/190 (58.95%), Query Frame = 2
Query:  158 RFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNPSFKLTDNKFADLSNEEFISTYLGYNKPYNEPSWPSVQY----LGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSEXQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTNI 715
            RF  +  +Y + Y S  E  +RF I+S ++Q +   N +  S++L  N+FAD+S EEF +T LG  +  +     + +     + LP + DWR++G V+PVK+QG CGSCW FS   A+E      TGK +SLSEQ+LVDC       GCNGG   +AFE+I   GG+ TE+ YPY+G N  C+    N+
Sbjct:   58 RFARFAVRYGKSYESAAEVHKRFRIFSESLQLVRSTNRKGLSYRLGINRFADMSWEEFRATRLGAAQNCSATLTGNHRMRAAAVALPETKDWREDGIVSPVKNQGHCGSCWTFSTTGALEAAYTQATGKPISLSEQQLVDCGFAFNNFGCNGGLPSQAFEYIKYNGGLDTEESYPYQGVNGICKFKNENV 247          
BLAST of FC921348 vs. ExPASy Swiss-Prot
Match: CATV_NPVBM (Viral cathepsin OS=Bombyx mori nuclear polyhedrosis virus GN=VCATH PE=1 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.823e-35
Identity = 84/221 (38.01%), Postives = 120/221 (54.30%), Query Frame = 2
Query:   71 LFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNPSFKLTDNKFADLSNEEFISTYLGYNKPYNEPSWPSVQYLGLPAS-----VDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSEXQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTNIM 718
            LF L+V  +   A        YDP      FE ++ ++++ Y SE E  RRF I+  N+  I   N QN S K   NKF+DLS +E I+ Y G + P    ++  V  L  P        DWR+   VT VK+QG CG+CWAF+ + ++E    +K  +L++LSEQ+++DCD      GCNGG +  AFE I K+GGV  E DYPY   N+ C+ +    +
Sbjct:    5 LFYLFVYAVVKSA-------AYDPLKAPNYFEEFVHRFNKNYSSEVEKLRRFKIFQHNLNEIINKN-QNDSAKYEINKFSDLSKDETIAKYTGLSLPTQTQNFCKVILLDQPPGKGPLEFDWRRLNKVTSVKNQGMCGACWAFATLGSLESQFAIKHNELINLSEQQMIDCDF--VDAGCNGGLLHTAFEAIIKMGGVQLESDYPYEADNNNCRMNSNKFL 215          
The following BLAST results are available for this feature:
BLAST of FC921348 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 164
Match NameE-valueIdentityDescription
CATL1_PIG3.674e-3641.36Cathepsin L1 OS=Sus scrofa GN=CTSL1 PE=2 SV=1[more]
CATK_BOVIN4.798e-3641.09Cathepsin K OS=Bos taurus GN=CTSK PE=2 SV=2[more]
CATH_PIG6.266e-3640.18Cathepsin H OS=Sus scrofa GN=CTSH PE=1 SV=1[more]
CYSP2_HOMAM8.184e-3641.15Digestive cysteine proteinase 2 OS=Homarus america... [more]
CATL_SARPE8.184e-3640.89Cathepsin L OS=Sarcophaga peregrina PE=1 SV=1[more]
CATK_PIG8.184e-3640.59Cathepsin K OS=Sus scrofa GN=CTSK PE=2 SV=1[more]
CATK_CANFA8.184e-3640.78Cathepsin K OS=Canis familiaris GN=CTSK PE=2 SV=1[more]
CATL2_BOVIN1.069e-3544.04Cathepsin L2 OS=Bos taurus GN=CTSL2 PE=2 SV=1[more]
CYSP2_MAIZE1.396e-3541.05Cysteine proteinase 2 OS=Zea mays GN=CCP2 PE=2 SV=... [more]
CATV_NPVBM1.823e-3538.01Viral cathepsin OS=Bombyx mori nuclear polyhedrosi... [more]

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Properties
Property NameValue
Genbank descriptionC32103H09EF RVDevelopN Citrus clementina cDNA clone C32103H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921348 ID=FC921348; Name=FC921348; organism=Citrus clementina; type=EST; length=733bp
GATCTATACTAATCTACATCTCAAGATAGCAATAGATATGCGCATGATGT
TGAGAAATGCTGTGCTATCTCTTTTTCTTTTGTGGGTTCTCGGGATACCT
GCAGGGGCATGGTCAGAGGGCTATCCACAAAAGTACGACCCACAATCCAT
GGAGGAGAGGTTCGAAAACTGGCTAAAACAATATAGCCGAGAGTATGGGA
GTGAAGATGAATGGCAACGGCGATTTGGAATCTACTCGTCCAATGTTCAG
TACATTGACTACATCAATTCTCAAAACCCATCATTCAAGCTAACAGACAA
TAAATTTGCAGACCTGTCAAATGAAGAGTTCATTTCTACCTACTTGGGAT
ATAATAAACCGTACAACGAACCAAGTTGGCCAAGCGTACAATATTTGGGT
TTGCCAGCTAGCGTAGATTGGAGAAAGGAAGGTGCTGTAACTCCAGTCAA
AGATCAAGGCCAATGTGGAAGTTGTTGGGCGTTCTCTGCAGTGGCAGCTG
TGGAAGGCATCAACAAATTAAAAACAGGAAAATTGGTATCTCTGTCAGAG
CAGGAATTGGTGGACTGTGATGTTAACAGCGAANACCAAGGCTGCAATGG
TGGATACATGGAGAAAGCATTTGAATTCATCACAAAGATTGGTGGAGTCA
CCACAGAGGATGATTATCCTTACAGAGGCAAAAATGACCGCTGTCAGACA
GATAAAACAAACATCATGCAGTGACCATACTGG
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