FC921348

Overview
NameFC921348
Unique NameFC921348
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length733
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921348 vs. ExPASy Swiss-Prot
Match: CATK_HUMAN (Cathepsin K OS=Homo sapiens GN=CTSK PE=1 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.823e-35
Identity = 82/202 (40.59%), Postives = 119/202 (58.91%), Query Frame = 2
Query:  134 YDPQSMEERFENWLKQYSREYGSE-DEWQRRFGIYSSNVQYIDYINSQNP----SFKLTDNKFADLSNEEFISTYLGYNKPYNEPSWPSVQYLG-----LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSEXQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKT 709
            Y  + ++  +E W K + ++Y ++ DE  RR  I+  N++YI   N +      +++L  N   D+++EE +    G   P +        Y+       P SVD+RK+G VTPVK+QGQCGSCWAFS+V A+EG  K KTGKL++LS Q LVDC   SE  GC GGYM  AF+++ K  G+ +ED YPY G+ + C  + T
Sbjct:   17 YPEEILDTHWELWKKTHRKQYNNKVDEISRRL-IWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPLSHSRSNDTLYIPEWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDC--VSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCMYNPT 215          
BLAST of FC921348 vs. ExPASy Swiss-Prot
Match: CATH_RAT (Cathepsin H OS=Rattus norvegicus GN=Ctsh PE=1 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.381e-35
Identity = 82/206 (39.81%), Postives = 124/206 (60.19%), Query Frame = 2
Query:  101 AGAW--SEGYPQKYDPQSMEE-RFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNPSFKLTDNKFADLSNEEFISTYLGYNKPYNEPSWPSVQYLGL---PASVDWRKEG-AVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSEXQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQ 697
            AGAW  S G   +    ++E+  F +W+KQ+ + Y S  E+  R  ++++N + I   N +N +FK+  N+F+D+S  E    YL +++P N  +  S    G    P+S+DWRK+G  V+PVK+QG CGSCW FS   A+E    + +GK+++L+EQ+LVDC  N    GC GG   +AFE+I    G+  ED YPY GKN +C+
Sbjct:   10 AGAWLLSAGATAELTVNAIEKFHFTSWMKQHQKTYSSR-EYSHRLQVFANNWRKIQAHNQRNHTFKMGLNQFSDMSFAEIKHKYL-WSEPQNCSATKSNYLRGTGPYPSSMDWRKKGNVVSPVKNQGACGSCWTFSTTGALESAVAIASGKMMTLAEQQLVDCAQNFNNHGCQGGLPSQAFEYILYNKGIMGEDSYPYIGKNGQCK 213          
BLAST of FC921348 vs. ExPASy Swiss-Prot
Match: CYSP1_MAIZE (Cysteine proteinase 1 OS=Zea mays GN=CCP1 PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 3.110e-35
Identity = 81/205 (39.51%), Postives = 113/205 (55.12%), Query Frame = 2
Query:  152 EERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNPSFKLTDNKFADLSNEEFISTYLGYNKPY---------NEPSWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCD-------VNSEXQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTNIM 718
            E  F ++++++ + Y   DE   R  ++  N++        +PS +    KF+DL+  EF  TYLG  K           +    P +   GLP   DWR  GAV PVK+QG CGSCW+FSA  A+EG + L TGKL  LSEQ+ VDCD        +S   GCNGG M  AF ++ K GG+ +E DYPY G + +C+ DK+ I+
Sbjct:   45 ESHFLSFVQRFGKSYKDADEHAYRLSVFKDNLRRARRHQLLDPSAEHGVTKFSDLTPAEFRRTYLGLRKSRRALLRELGESAHEAPVLPTDGLPDDFDWRDHGAVGPVKNQGSCGSCWSFSASGALEGAHYLATGKLEVLSEQQFVDCDHECDSSEPDSCDSGCNGGLMTTAFSYLQKAGGLESEKDYPYTGSDGKCKFDKSKIV 249          
BLAST of FC921348 vs. ExPASy Swiss-Prot
Match: CATK_RABIT (Cathepsin K OS=Oryctolagus cuniculus GN=CTSK PE=1 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 3.110e-35
Identity = 81/197 (41.12%), Postives = 120/197 (60.91%), Query Frame = 2
Query:  149 MEERFENWLKQYSREYGSE-DEWQRRFGIYSSNVQYIDYINSQNP----SFKLTDNKFADLSNEEFISTYLGYNKPYNEPSWPSVQYLG-----LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSEXQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKT 709
            ++ ++E W K YS++Y S+ DE  RR  I+  N+++I   N +      +++L  N   D+++EE +    G   P +        Y+       P S+D+RK+G VTPVK+QGQCGSCWAFS+V A+EG  K KTGKL++LS Q LVDC   SE  GC GGYM  AF+++ +  G+ +ED YPY G+++ C  + T
Sbjct:   22 LDTQWELWKKTYSKQYNSKVDEISRRL-IWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPPSRSHSNDTLYIPDWEGRTPDSIDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDC--VSENYGCGGGYMTNAFQYVQRNRGIDSEDAYPYVGQDESCMYNPT 215          
BLAST of FC921348 vs. ExPASy Swiss-Prot
Match: CATV_NPVHC (Viral cathepsin OS=Hyphantria cunea nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 4.062e-35
Identity = 76/195 (38.97%), Postives = 113/195 (57.95%), Query Frame = 2
Query:  134 YDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNPSFKLTDNKFADLSNEEFISTYLGYNKPYNEPSWPSVQYLGLPAS-----VDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSEXQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTD 703
            YD       FE++L ++++ Y SE E  RRF I+  N++ I   N  + + +   NKF+DLS +E IS Y G   P    ++  V  L  P        DWR+   VT VK+QG CG+CWAF+ +A++E    +K  +L++LSEQ+L+DCD      GCNGG +  A+E + ++GGV  E+DYPY G +  C+ D
Sbjct:   19 YDLLKAPSYFEDFLHKFNKHYSSESEKLRRFQIFQHNLEEIIIKNQNDTTAQYEINKFSDLSKDETISKYTGLALPLQTQNFCEVVVLNRPPDKGPLEFDWRRLNKVTSVKNQGICGACWAFATLASLESQFAIKHNQLINLSEQQLIDCDY--VDAGCNGGLLHTAYEAVMQMGGVQAENDYPYEGSDGNCRVD 211          
BLAST of FC921348 vs. ExPASy Swiss-Prot
Match: CATL_DROME (Cathepsin L OS=Drosophila melanogaster GN=Cp1 PE=1 SV=2)

HSP 1 Score: 148.288 bits (373), Expect = 4.062e-35
Identity = 82/202 (40.59%), Postives = 111/202 (54.95%), Query Frame = 2
Query:  155 ERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ----NPSFKLTDNKFADLSNEEFISTYLGYN-----------KPYNEPSWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSEXQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTNI 715
            E +  +  ++ + Y  E E + R  I++ N   I   N +      SFKL  NK+ADL + EF     G+N           + +   ++ S  ++ LP SVDWR +GAVT VKDQG CGSCWAFS+  A+EG +  K+G LVSLSEQ LVDC       GCNGG M+ AF +I   GG+ TE  YPY   +D C  +K  +
Sbjct:   57 EEWHTFKLEHRKNYQDETEERFRLKIFNENKHKIAKHNQRFAEGKVSFKLAVNKYADLLHHEFRQLMNGFNYTLHKQLRAADESFKGVTFISPAHVTLPKSVDWRTKGAVTAVKDQGHCGSCWAFSSTGALEGQHFRKSGVLVSLSEQNLVDCSTKYGNNGCNGGLMDNAFRYIKDNGGIDTEKSYPYEAIDDSCHFNKGTV 258          
BLAST of FC921348 vs. ExPASy Swiss-Prot
Match: CYSP4_DICDI (Cysteine proteinase 4 OS=Dictyostelium discoideum GN=cprD PE=2 SV=2)

HSP 1 Score: 147.902 bits (372), Expect = 5.305e-35
Identity = 80/204 (39.22%), Postives = 118/204 (57.84%), Query Frame = 2
Query:  128 QKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNPSFKLTDNKFADLSNEEFISTYLGYNKPYNEPSWPSVQ---YLGLPA-SVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTG---KLVSLSEQELVDCDVNSEXQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDR-CQTDKTNI 715
            Q++        F NW++ + R Y SE E+  R+ I+ SN+ Y+   NS+     L  N FAD++N+E+ +TYLG   P++  +    +       PA +VDWR +GAVTP+K+QGQCG CW+FS   + EG + + +G    LVSLSEQ L+DC  +    GC GG M  AFE+I    G+ TE  YPY  ++ + C+   +NI
Sbjct:   19 QQFSELQYRNAFTNWMQAHQRTYSSE-EFNARYQIFKSNMDYVHQWNSKGGETVLGLNVFADITNQEYRTTYLG--TPFDGSALIGTEEEKIFSTPAPTVDWRAQGAVTPIKNQGQCGGCWSFSTTGSTEGAHFIASGTKKDLVSLSEQNLIDCSKSYGNNGCEGGLMTLAFEYIINNKGIDTESSYPYTAEDGKECKFKTSNI 219          
BLAST of FC921348 vs. ExPASy Swiss-Prot
Match: ALEU_ARATH (Thiol protease aleurain OS=Arabidopsis thaliana GN=ALEU PE=1 SV=2)

HSP 1 Score: 147.902 bits (372), Expect = 5.305e-35
Identity = 78/187 (41.71%), Postives = 106/187 (56.68%), Query Frame = 2
Query:  161 FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNPSFKLTDNKFADLSNEEFISTYLG--YNKPYNEPSWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSEXQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTNI 715
            F  +  +Y ++Y + +E + RF I+  N+  I   N +  S+KL  N+FADL+ +EF  T LG   N          V    LP + DWR++G V+PVKDQG CGSCW FS   A+E       GK +SLSEQ+LVDC       GCNGG   +AFE+I   GG+ TE  YPY GK++ C+    N+
Sbjct:   59 FARFTHRYGKKYQNVEEMKLRFSIFKENLDLIRSTNKKGLSYKLGVNQFADLTWQEFQRTKLGAAQNCSATLKGSHKVTEAALPETKDWREDGIVSPVKDQGGCGSCWTFSTTGALEAAYHQAFGKGISLSEQQLVDCAGAFNNYGCNGGLPSQAFEYIKSNGGLDTEKAYPYTGKDETCKFSAENV 245          
BLAST of FC921348 vs. ExPASy Swiss-Prot
Match: CATS_BOVIN (Cathepsin S OS=Bos taurus GN=CTSS PE=1 SV=2)

HSP 1 Score: 146.362 bits (368), Expect = 1.543e-34
Identity = 85/221 (38.46%), Postives = 127/221 (57.47%), Query Frame = 2
Query:   74 FLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNP----SFKLTDNKFADLSNEEFISTYLGYNKPYNEP---SWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCD-VNSEXQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTN 712
            +L+W L + + A +  +    DP +++  ++ W K Y ++Y  ++E   R  I+  N++ +   N ++     S++L  N   D+++EE IS       P   P   ++ S     LP S+DWR++G VT VK QG CGSCWAFSAV A+E   KLKTGKLVSLS Q LVDC       +GCNGG+M +AF++I    G+ +E  YPY+  + +CQ D  N
Sbjct:    3 WLVWALLLCSSAMAHVHR---DP-TLDHHWDLWKKTYGKQYKEKNEEVARRLIWEKNLKTVTLHNLEHSMGMHSYELGMNHLGDMTSEEVISLMSSLRVPSQWPRNVTYKSDPNQKLPDSMDWREKGCVTEVKYQGACGSCWAFSAVGALEAQVKLKTGKLVSLSAQNLVDCSTAKYGNKGCNGGFMTEAFQYIIDNNGIDSEASYPYKAMDGKCQYDVKN 219          
BLAST of FC921348 vs. ExPASy Swiss-Prot
Match: CATV_NPVLD (Viral cathepsin OS=Lymantria dispar multicapsid nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.016e-34
Identity = 79/210 (37.62%), Postives = 121/210 (57.62%), Query Frame = 2
Query:  101 AGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYIN---SQNPSFKLTDNKFADLSNEEFISTYLGYNKPYNEPSWPSVQYLGLPAS-----VDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSEXQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDK 706
            A A  EG    Y+ Q   + FE++++ Y++ Y S+ E  +R+ I+  N+  I+  N   +  P+     NKF+DLS  E I+ + G + P    ++     L  P        DWR++  VT +K+QG CG+CWAF+ +A+VE    ++  +L+ LSEQ+L+DCD  S   GCNGG +  AFE I ++GGV TE DYP+ G+N RC  D+
Sbjct:   38 ASAADEG--AAYNLQRAPDYFESFVENYNKNYTSDWEKNKRYSIFKDNLHEINAKNGNATDGPTATYKINKFSDLSKSELIAKFTGLSIPERVSNFCKTIILNQPPDKGPLHFDWREQNKVTSIKNQGACGACWAFATLASVESQFAMRHNRLIDLSEQQLIDCD--SVDMGCNGGLLHTAFEEIMRMGGVQTELDYPFVGRNRRCGLDR 243          
The following BLAST results are available for this feature:
BLAST of FC921348 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 164
Match NameE-valueIdentityDescription
CATK_HUMAN1.823e-3540.59Cathepsin K OS=Homo sapiens GN=CTSK PE=1 SV=1[more]
CATH_RAT2.381e-3539.81Cathepsin H OS=Rattus norvegicus GN=Ctsh PE=1 SV=1[more]
CYSP1_MAIZE3.110e-3539.51Cysteine proteinase 1 OS=Zea mays GN=CCP1 PE=2 SV=... [more]
CATK_RABIT3.110e-3541.12Cathepsin K OS=Oryctolagus cuniculus GN=CTSK PE=1 ... [more]
CATV_NPVHC4.062e-3538.97Viral cathepsin OS=Hyphantria cunea nuclear polyhe... [more]
CATL_DROME4.062e-3540.59Cathepsin L OS=Drosophila melanogaster GN=Cp1 PE=1... [more]
CYSP4_DICDI5.305e-3539.22Cysteine proteinase 4 OS=Dictyostelium discoideum ... [more]
ALEU_ARATH5.305e-3541.71Thiol protease aleurain OS=Arabidopsis thaliana GN... [more]
CATS_BOVIN1.543e-3438.46Cathepsin S OS=Bos taurus GN=CTSS PE=1 SV=2[more]
CATV_NPVLD2.016e-3437.62Viral cathepsin OS=Lymantria dispar multicapsid nu... [more]

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Properties
Property NameValue
Genbank descriptionC32103H09EF RVDevelopN Citrus clementina cDNA clone C32103H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921348 ID=FC921348; Name=FC921348; organism=Citrus clementina; type=EST; length=733bp
GATCTATACTAATCTACATCTCAAGATAGCAATAGATATGCGCATGATGT
TGAGAAATGCTGTGCTATCTCTTTTTCTTTTGTGGGTTCTCGGGATACCT
GCAGGGGCATGGTCAGAGGGCTATCCACAAAAGTACGACCCACAATCCAT
GGAGGAGAGGTTCGAAAACTGGCTAAAACAATATAGCCGAGAGTATGGGA
GTGAAGATGAATGGCAACGGCGATTTGGAATCTACTCGTCCAATGTTCAG
TACATTGACTACATCAATTCTCAAAACCCATCATTCAAGCTAACAGACAA
TAAATTTGCAGACCTGTCAAATGAAGAGTTCATTTCTACCTACTTGGGAT
ATAATAAACCGTACAACGAACCAAGTTGGCCAAGCGTACAATATTTGGGT
TTGCCAGCTAGCGTAGATTGGAGAAAGGAAGGTGCTGTAACTCCAGTCAA
AGATCAAGGCCAATGTGGAAGTTGTTGGGCGTTCTCTGCAGTGGCAGCTG
TGGAAGGCATCAACAAATTAAAAACAGGAAAATTGGTATCTCTGTCAGAG
CAGGAATTGGTGGACTGTGATGTTAACAGCGAANACCAAGGCTGCAATGG
TGGATACATGGAGAAAGCATTTGAATTCATCACAAAGATTGGTGGAGTCA
CCACAGAGGATGATTATCCTTACAGAGGCAAAAATGACCGCTGTCAGACA
GATAAAACAAACATCATGCAGTGACCATACTGG
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