FC921348

Overview
NameFC921348
Unique NameFC921348
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length733
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921348 vs. ExPASy Swiss-Prot
Match: ALEU_HORVU (Thiol protease aleurain OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.229e-33
Identity = 75/188 (39.89%), Postives = 107/188 (56.91%), Query Frame = 2
Query:  158 RFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNPSFKLTDNKFADLSNEEFISTYLGYNKPYNEP---SWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSEXQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTN 712
            RF  +  +Y + Y S  E +RRF I+S +++ +   N +   ++L  N+F+D+S EEF +T LG  +  +     +        LP + DWR++G V+PVK+Q  CGSCW FS   A+E      TGK +SLSEQ+LVDC       GCNGG   +AFE+I   GG+ TE+ YPY+G N  C     N
Sbjct:   60 RFARFAVRYGKSYESAAEVRRRFRIFSESLEEVRSTNRKGLPYRLGINRFSDMSWEEFQATRLGAAQTCSATLAGNHLMRDAAALPETKDWREDGIVSPVKNQAHCGSCWTFSTTGALEAAYTQATGKNISLSEQQLVDCAGGFNNFGCNGGLPSQAFEYIKYNGGIDTEESYPYKGVNGVCHYKAEN 247          
BLAST of FC921348 vs. ExPASy Swiss-Prot
Match: P34_SOYBN (P34 probable thiol protease OS=Glycine max PE=1 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 4.965e-33
Identity = 80/193 (41.45%), Postives = 111/193 (57.51%), Query Frame = 2
Query:  161 FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNPS---FKLTDNKFADLSNEEFISTYLGYNKPYNEP------SWPSVQYL--GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSEXQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDK 706
            F+ W  ++ R Y + +E  +R  I+ +N  YI  +N+   S    +L  NKFAD++ +EF   YL   K  ++            QY     PAS DWRK+G +T VK QG CG  WAFSA  A+E  + + TG LVSLSEQELVDC   SE  G   G+  ++FE++ + GG+ T+DDYPYR K  RC+ +K
Sbjct:   44 FQLWKSEHGRVYHNHEEEAKRLEIFKNNSNYIRDMNANRKSPHSHRLGLNKFADITPQEFSKKYLQAPKDVSQQIKMANKKMKKEQYSCDHPPASWDWRKKGVITQVKYQGGCGRGWAFSATGAIEAAHAIATGDLVSLSEQELVDCVEESE--GSYNGWQYQSFEWVLEHGGIATDDDYPYRAKEGRCKANK 234          
BLAST of FC921348 vs. ExPASy Swiss-Prot
Match: CYSP3_SOLLC (Cysteine proteinase 3 OS=Solanum lycopersicum GN=CYP-3 PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 4.965e-33
Identity = 76/187 (40.64%), Postives = 111/187 (59.36%), Query Frame = 2
Query:  161 FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNPSFKLTDNKFADLSNEEFISTYLGYNKPYNEPSWPSVQYLG--LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSEXQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTNI 715
            F  +  ++ + Y S +E ++RF I+  N++ I   N +  S+KL  N+F DL+ +EF    LG ++  +  +  +++     LP + DWRK+G V+PVK QG+CGSCW FS   A+E       GK +SLSEQ+LVDC       GCNGG   +AFE+I   GG+ TE+ YPY GKN  C+  + NI
Sbjct:   57 FARFAIRHRKRYDSVEEIKQRFEIFLDNLKMIRSHNRKGLSYKLGINEFTDLTWDEFRKHKLGASQNCSATTKGNLKLTNVVLPETKDWRKDGIVSPVKAQGKCGSCWTFSTTGALEAAYAQAFGKGISLSEQQLVDCAGAFNNFGCNGGLPSQAFEYIKFNGGLDTEEAYPYTGKNGICKFSQANI 243          
BLAST of FC921348 vs. ExPASy Swiss-Prot
Match: CATH_MOUSE (Cathepsin H OS=Mus musculus GN=Ctsh PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 4.965e-33
Identity = 79/206 (38.35%), Postives = 122/206 (59.22%), Query Frame = 2
Query:  101 AGAW--SEGYPQKYDPQSMEE-RFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNPSFKLTDNKFADLSNEEFISTYLGYNKPYNEPSWPSVQYLGL---PASVDWRKEG-AVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSEXQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQ 697
            AGAW  S G   +    ++E+  F++W+KQ+ + Y S  E+  R  ++++N + I   N +N +FK+  N+F+D+S  E    +L +++P N  +  S    G    P+S+DWRK+G  V+PVK+QG C SCW FS   A+E    + +GK++SL+EQ+LVDC       GC GG   +AFE+I    G+  ED YPY GK+  C+
Sbjct:   10 AGAWLLSTGATAELTVNAIEKFHFKSWMKQHQKTYSSV-EYNHRLQMFANNWRKIQAHNQRNHTFKMALNQFSDMSFAEIKHKFL-WSEPQNCSATKSNYLRGTGPYPSSMDWRKKGNVVSPVKNQGACASCWTFSTTGALESAVAIASGKMLSLAEQQLVDCAQAFNNHGCKGGLPSQAFEYILYNKGIMEEDSYPYIGKDSSCR 213          
BLAST of FC921348 vs. ExPASy Swiss-Prot
Match: CATV_NPVOP (Viral cathepsin OS=Orgyia pseudotsugata multicapsid polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 6.485e-33
Identity = 75/194 (38.66%), Postives = 112/194 (57.73%), Query Frame = 2
Query:  134 YDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNPSFKLTDNKFADLSNEEFISTYLGYNKPYNEPSWPSVQYLGLPAS-----VDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCD-VNSEXQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQ 697
            YD       FE++L ++++ Y SE E   RF I+  N++ I   N  + + +   NKF+DLS EE IS Y G + P+   ++  V  L  P        DWR+   VT VK+QG CG+CWAF+ + ++E    +K  +L++LSEQ+ +DCD VN+   GC+GG +  AFE   ++GGV  E DYPY   N +C+
Sbjct:   19 YDLLKAPNYFEDFLHKFNKNYSSESEKLHRFKIFQHNLEEIINKNQNDSTAQYEINKFSDLSKEEAISKYTGLSLPHQTQNFCEVVILDRPPDRGPLEFDWRQFNKVTSVKNQGVCGACWAFATLGSLESQFAIKYNRLINLSEQQFIDCDRVNA---GCDGGLLHTAFESAMEMGGVQMESDYPYETANGQCR 209          
BLAST of FC921348 vs. ExPASy Swiss-Prot
Match: CATV_NPVBS (Viral cathepsin OS=Buzura suppressaria nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 6.485e-33
Identity = 73/210 (34.76%), Postives = 114/210 (54.29%), Query Frame = 2
Query:  113 SEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNPSFKLTDNKFADLSNEEFISTYLGYNKPYNEPSWPSVQYLGLPA-----SVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSEXQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQT--DKTNIMQ 721
            ++ Y   YD     + FE +L  Y++ Y    E +RRF I+   ++ I+Y N  N S     NKFADLS  E IS Y G N P    ++     +  P      + DWR++  VT +K+Q  CG+CWAF+ +A++E    +K    + LSEQ+++DCD      GC+GG +  AFE + ++G +  E +YPY G N  C+   D+T +++
Sbjct:   15 AKNYAFAYDLLKAGDYFETFLANYNKMYNDTSEKERRFSIFQQTLEEINYKNRLNDSAVYQINKFADLSKNEIISKYTGLNMPVQTTNFCKTIVIDQPPGKGPLNFDWRQQNKVTSIKNQKACGACWAFATLASIESQYAIKNNVHIDLSEQQMIDCDY--VDMGCDGGLLHTAFEQMIQMGELVQEHEYPYAGVNKPCELRGDETGVVK 222          
BLAST of FC921348 vs. ExPASy Swiss-Prot
Match: ALEUL_ARATH (Thiol protease aleurain-like OS=Arabidopsis thaliana GN=At3g45310 PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 6.485e-33
Identity = 74/187 (39.57%), Postives = 106/187 (56.68%), Query Frame = 2
Query:  161 FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNPSFKLTDNKFADLSNEEFISTYLG--YNKPYNEPSWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSEXQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTNI 715
            F  +  +Y ++Y S +E + RF ++  N+  I   N +  S+KL+ N+FADL+ +EF    LG   N          +    +P + DWR++G V+PVK+QG CGSCW FS   A+E       GK +SLSEQ+LVDC       GC+GG   +AFE+I   GG+ TE+ YPY GK+  C+    NI
Sbjct:   59 FSRFTHRYGKKYQSVEEMKLRFSVFKENLDLIRSTNKKGLSYKLSLNQFADLTWQEFQRYKLGAAQNCSATLKGSHKITEATVPDTKDWREDGIVSPVKEQGHCGSCWTFSTTGALEAAYHQAFGKGISLSEQQLVDCAGTFNNFGCHGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGGCKFSAKNI 245          
BLAST of FC921348 vs. ExPASy Swiss-Prot
Match: CATJ_MOUSE (Cathepsin J OS=Mus musculus GN=Ctsj PE=2 SV=2)

HSP 1 Score: 140.584 bits (353), Expect = 8.469e-33
Identity = 79/220 (35.91%), Postives = 121/220 (55.00%), Query Frame = 2
Query:   71 LFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNP----SFKLTDNKFADLSNEEFISTYLGYNKP--YNEPSWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSEXQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTN 712
            L L+   G+ +GA      Q +DP+ ++  +++W  +Y++ Y  ++E  RR  ++  N++ I   N +N     +F +  NKF D ++EEF  +      P    +P   +   +GLP   DWR+EG VTPV++QG+CGSCWAF+A  A+EG    KTG L  LS Q L+DC      +GC  G   +AFE++ K  G+  E  YPY GK+  C+    N
Sbjct:    6 LLLILCFGVASGA------QAHDPK-LDAEWKDWKTKYAKSYSPKEEALRR-AVWEENMRMIKLHNKENSLGKNNFTMKMNKFGDQTSEEFRKSIDNIPIPAAMTDPHAQNHVSIGLPDYKDWREEGYVTPVRNQGKCGSCWAFAAAGAIEGQMFWKTGNLTPLSVQNLLDCSKTVGNKGCQSGTAHQAFEYVLKNKGLEAEATYPYEGKDGPCRYRSEN 217          
BLAST of FC921348 vs. ExPASy Swiss-Prot
Match: CATL6_HUMAN (Putative cathepsin L-like protein 6 OS=Homo sapiens GN=CTSLL6 PE=5 SV=3)

HSP 1 Score: 140.198 bits (352), Expect = 1.106e-32
Identity = 69/146 (47.26%), Postives = 90/146 (61.64%), Query Frame = 2
Query:  281 SFKLTDNKFADLSNEEFISTYLGYN-------KPYNEPSWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSEXQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQ 697
            SF +  N F D++NEEF     G+        K + E   P +     P SVDWR++G +TPVKDQGQCGSCWAFSA  A+EG    KTGKL+SL+EQ LVDC      +GCNGG+M+  F ++ + GG+ +E  YPY GK   C+
Sbjct:   15 SFTMAMNAFGDMTNEEFRQVMNGFQYQKHRKGKQFQERLLPEI-----PTSVDWREKGYMTPVKDQGQCGSCWAFSATGALEGQMFWKTGKLISLNEQNLVDCSGPQGNEGCNGGFMDNPFRYVQENGGLDSEASYPYEGKVKTCR 155          
BLAST of FC921348 vs. ExPASy Swiss-Prot
Match: CATV_NPVCD (Viral cathepsin OS=Choristoneura fumiferana defective polyhedrosis virus GN=Vcath PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.464e-32
Identity = 71/193 (36.79%), Postives = 108/193 (55.96%), Query Frame = 2
Query:  134 YDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNPSFKLTDNKFADLSNEEFISTYLGYNKPYNEPSWPSVQYLGLPAS-----VDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSEXQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQ 697
            YD       FE++L  +++ Y S+ E   RF I+  N++ I   N  + S +   NKF+DLS +E IS Y G + P    ++  V  L  P        DWR+   VT VK+QG CG+CWAF+ + ++E    +K  +L++LSEQ+L+DCD      GC+GG +  A+E +  +GG+  E+DYPY   N  C+
Sbjct:   19 YDLLKAPSYFEDFLHNFNKNYSSKSEKLHRFKIFQHNLEEIINKNLNDTSAQYEINKFSDLSKDETISKYTGLSLPLQNQNFCEVVVLNRPPDKGPLEFDWRRLNKVTSVKNQGTCGACWAFATLGSLESQFAIKHDQLINLSEQQLIDCDF--VDMGCDGGLLHTAYEAVMNMGGIQAENDYPYEANNGDCR 209          
The following BLAST results are available for this feature:
BLAST of FC921348 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 164
Match NameE-valueIdentityDescription
ALEU_HORVU2.229e-3339.89Thiol protease aleurain OS=Hordeum vulgare PE=2 SV... [more]
P34_SOYBN4.965e-3341.45P34 probable thiol protease OS=Glycine max PE=1 SV... [more]
CYSP3_SOLLC4.965e-3340.64Cysteine proteinase 3 OS=Solanum lycopersicum GN=C... [more]
CATH_MOUSE4.965e-3338.35Cathepsin H OS=Mus musculus GN=Ctsh PE=2 SV=1[more]
CATV_NPVOP6.485e-3338.66Viral cathepsin OS=Orgyia pseudotsugata multicapsi... [more]
CATV_NPVBS6.485e-3334.76Viral cathepsin OS=Buzura suppressaria nuclear pol... [more]
ALEUL_ARATH6.485e-3339.57Thiol protease aleurain-like OS=Arabidopsis thalia... [more]
CATJ_MOUSE8.469e-3335.91Cathepsin J OS=Mus musculus GN=Ctsj PE=2 SV=2[more]
CATL6_HUMAN1.106e-3247.26Putative cathepsin L-like protein 6 OS=Homo sapien... [more]
CATV_NPVCD2.464e-3236.79Viral cathepsin OS=Choristoneura fumiferana defect... [more]

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Properties
Property NameValue
Genbank descriptionC32103H09EF RVDevelopN Citrus clementina cDNA clone C32103H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921348 ID=FC921348; Name=FC921348; organism=Citrus clementina; type=EST; length=733bp
GATCTATACTAATCTACATCTCAAGATAGCAATAGATATGCGCATGATGT
TGAGAAATGCTGTGCTATCTCTTTTTCTTTTGTGGGTTCTCGGGATACCT
GCAGGGGCATGGTCAGAGGGCTATCCACAAAAGTACGACCCACAATCCAT
GGAGGAGAGGTTCGAAAACTGGCTAAAACAATATAGCCGAGAGTATGGGA
GTGAAGATGAATGGCAACGGCGATTTGGAATCTACTCGTCCAATGTTCAG
TACATTGACTACATCAATTCTCAAAACCCATCATTCAAGCTAACAGACAA
TAAATTTGCAGACCTGTCAAATGAAGAGTTCATTTCTACCTACTTGGGAT
ATAATAAACCGTACAACGAACCAAGTTGGCCAAGCGTACAATATTTGGGT
TTGCCAGCTAGCGTAGATTGGAGAAAGGAAGGTGCTGTAACTCCAGTCAA
AGATCAAGGCCAATGTGGAAGTTGTTGGGCGTTCTCTGCAGTGGCAGCTG
TGGAAGGCATCAACAAATTAAAAACAGGAAAATTGGTATCTCTGTCAGAG
CAGGAATTGGTGGACTGTGATGTTAACAGCGAANACCAAGGCTGCAATGG
TGGATACATGGAGAAAGCATTTGAATTCATCACAAAGATTGGTGGAGTCA
CCACAGAGGATGATTATCCTTACAGAGGCAAAAATGACCGCTGTCAGACA
GATAAAACAAACATCATGCAGTGACCATACTGG
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