FC921382
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921382 vs. ExPASy Swiss-Prot
Match: CAPP_RALSO (Phosphoenolpyruvate carboxylase OS=Ralstonia solanacearum GN=ppc PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.319e-27 Identity = 87/236 (36.86%), Postives = 117/236 (49.58%), Query Frame = 1 Query: 1 RLGDLIRRVVTFGMVLMKLDLRQESGRHAEALDAITRYLDM-GTYSEWDEDKKLEFLTRELKGKRPLVPPTIEVPSDVKEVLDTFRVAAEL----GSDSLGAYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGTLRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIK-*LFSWAKREYGRGGG 690 RL L R + FG L +DLRQ S H + + R + G Y+ E K L REL+ R L P LD FR A E+ GS + Y+IS SD+L V LLQK+A + G G G + V+PLFET+ DLR A ++ +LL++ + ++ QEVM+GYSDS KD G T+ WELYK + +V G++ LF GRGGG Sbjct: 444 RLASLARAIDVFGFHLASIDLRQVSDVHEATVAELLRVAGVEGAYAALSEADKRTLLLRELQQPRLLTLPFHTYSETTASELDIFRAAREVRARYGSRIVRNYIISHTETLSDLLEVMLLQKEAGMFRHGTNGSGGAGLDVMVIPLFETIEDLRNAPQIMGELLALPGF-DAVLAAQGNEQEVMLGYSDSNKDGGFLTSNWELYKTELALVELFERKGVRLRLFHGRGGTVGRGGG 678
BLAST of FC921382 vs. ExPASy Swiss-Prot
Match: CAPP_NOCFA (Phosphoenolpyruvate carboxylase OS=Nocardia farcinica GN=ppc PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.722e-27 Identity = 81/236 (34.32%), Postives = 120/236 (50.85%), Query Frame = 1 Query: 1 RLGDLIRRVVTFGMVLMKLDLRQESGRHAEALDAITRYLDMG-TYSEWDEDKKLEFLTRELKGKRPLVPPTIEVPSDVKEVLDTFRVAAEL----GSDSLGAYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGTLRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIK-*LFSWAKREYGRGGG 690 RL L V TFG L LD+RQ S H + + + + + Y + ED ++E L EL+ +RPL+ P + + + R A ++ G +++ Y+ISM ++ SD+L LL K+ L G P T+ +VPLFET+ DL + L + YR+ ++ QEVM+GYSDS KD G A W LY+A+ D+V + GI+ LF GRGGG Sbjct: 396 RLAALRHAVETFGFHLQGLDMRQNSEVHEQVVAELLAWAGVHPAYGDLPEDARVELLAAELRTRRPLLGPHARLSEQAAKEVGIVRAAKQVVDTFGPEAVPNYIISMCTSVSDMLEAALLLKEGGLLDPGA-PEGSPSCTVNIVPLFETIEDLGAGAATLAAALEVPVYRE-LVAAAGMRQEVMLGYSDSNKDGGYLAANWALYRAELDLVEVARKTGIRLRLFHGRGGTVGRGGG 629
BLAST of FC921382 vs. ExPASy Swiss-Prot
Match: CAPP_RHOP2 (Phosphoenolpyruvate carboxylase OS=Rhodopseudomonas palustris (strain HaA2) GN=ppc PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.458e-26 Identity = 81/236 (34.32%), Postives = 117/236 (49.58%), Query Frame = 1 Query: 1 RLGDLIRRVVTFGMVLMKLDLRQESGRHAEAL-DAITRYLDMGTYSEWDEDKKLEFLTRELKGKRPLVPPTIEVPSDVKEVLDTFRVAAEL----GSDSLGAYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGTLRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIK-*LFSWAKREYGRGGG 690 RL L R FG L LD+RQ S H + + + Y E ED ++ LT EL+ RPL ++ + L AA+ G+ ++ +ISM SD+L V +L K+ L P + +VPLFET+ DL+ + ++ +LL I YR+ ++ + G QEVM+GYSDS KD G T+ WELYKA+ ++ GI+ LF GRGGG Sbjct: 411 RLRQLRRAADCFGFHLASLDMRQNSAVHERTIAELMNAAHPASAYLEIGEDARIALLTAELRSARPLTSIFVKYSDETVGELAVLHEAAQAHATYGAAAIPQCIISMTKGVSDLLEVAVLLKEVGLI------DPSGRSAINIVPLFETIEDLQASSAIMDRLLGIPEYRR-LVDSRGGVQEVMLGYSDSNKDGGFVTSGWELYKAEIGLIEIFEHHGIRLRLFHGRGGSVGRGGG 639
BLAST of FC921382 vs. ExPASy Swiss-Prot
Match: CAPP_RHOPS (Phosphoenolpyruvate carboxylase OS=Rhodopseudomonas palustris (strain BisB5) GN=ppc PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.487e-26 Identity = 83/238 (34.87%), Postives = 119/238 (50.00%), Query Frame = 1 Query: 1 RLGDLIRRVVTFGMVLMKLDLRQESGRHAEAL-DAITRYLDMGTYSEWDEDKKLEFLTRELKGKRPLVPPTIEVPSDVKEVLDTFRVAAEL----GSDSLGAYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGG--TLRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIK-*LFSWAKREYGRGGG 690 RL L R FG L LD+RQ S H + + + +Y DED+++ LT EL+ RPL I+ + L AA G ++ +ISM SD+L V +L K E+G P G + +VPLFET+ DL+ ++ +LL+I YR+ ++ + G QEVM+GYSDS KD G T+ WELYKA+ ++ G++ LF GRGGG Sbjct: 411 RLRQLRRAADCFGFHLASLDMRQNSAVHERTMGELMDAARPTSSYLALDEDERIALLTGELRSARPLTSIFIKYSDETVGELAVLHEAARAHSIYGEAAIPQCIISMTKGVSDLLEVAVLLK--------EVGLIDPSGRCAINIVPLFETIEDLQACAAIMDRLLAIPEYRR-LVDSRGGVQEVMLGYSDSNKDGGFVTSGWELYKAEIGLLDVFEHHGVRLRLFHGRGGSVGRGGG 639
BLAST of FC921382 vs. ExPASy Swiss-Prot
Match: CAPP_BURPS (Phosphoenolpyruvate carboxylase OS=Burkholderia pseudomallei GN=ppc PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.248e-26 Identity = 89/239 (37.24%), Postives = 119/239 (49.79%), Query Frame = 1 Query: 1 RLGDLIRRVVTFGMVLMKLDLRQESGRH-AEALDAITRYLDMGTYSEWDEDKKLEFLTRELKGKRPLVPPTIEVPSDVKEVLDTFR----VAAELGSDSLGAYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGT--LRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGH-QEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIK-*LFSWAKREYGRGGG 690 RL L+R FG L +DLRQ S H A + + R Y+ E KL L L RPL P ++ K L + A+ G+ ++ Y+IS SD++ V LLQK+ L G LG P L V+PLFET+ DLR A ++R ++ + + H GH QEVM+GYSDS KD G T+ WELY+A+ +V +E GIK LF GRGGG Sbjct: 455 RLAPLMRAAEVFGFHLASIDLRQSSDIHEAVVAELLARGGVEADYAALPEADKLRVLLAALADPRPLRSPYLDYSDLAKSELGVLERAHAIRAQFGARAVRNYIISHTETVSDLVEVLLLQKETGL-FEGTLGTPHANARNGLMVIPLFETIADLRNASDIMRAFFALPGVGELLA--HQGHEQEVMLGYSDSNKDGGFLTSNWELYRAELALVDLFDERGIKLRLFHGRGGTVGRGGG 690
BLAST of FC921382 vs. ExPASy Swiss-Prot
Match: CAPP_BURP6 (Phosphoenolpyruvate carboxylase OS=Burkholderia pseudomallei (strain 668) GN=ppc PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.248e-26 Identity = 89/239 (37.24%), Postives = 119/239 (49.79%), Query Frame = 1 Query: 1 RLGDLIRRVVTFGMVLMKLDLRQESGRH-AEALDAITRYLDMGTYSEWDEDKKLEFLTRELKGKRPLVPPTIEVPSDVKEVLDTFR----VAAELGSDSLGAYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGT--LRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGH-QEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIK-*LFSWAKREYGRGGG 690 RL L+R FG L +DLRQ S H A + + R Y+ E KL L L RPL P ++ K L + A+ G+ ++ Y+IS SD++ V LLQK+ L G LG P L V+PLFET+ DLR A ++R ++ + + H GH QEVM+GYSDS KD G T+ WELY+A+ +V +E GIK LF GRGGG Sbjct: 455 RLAPLMRAAEVFGFHLASIDLRQSSDIHEAVVAELLARGGVEADYAALPEADKLRVLLAALADPRPLRSPYLDYSDLAKSELGVLERAHAIRAQFGARAVRNYIISHTETVSDLVEVLLLQKETGL-FEGTLGTPHANARNGLMVIPLFETIADLRNASDIMRAFFALPGVGELLA--HQGHEQEVMLGYSDSNKDGGFLTSNWELYRAELALVDLFDERGIKLRLFHGRGGTVGRGGG 690
BLAST of FC921382 vs. ExPASy Swiss-Prot
Match: CAPP_BURMS (Phosphoenolpyruvate carboxylase OS=Burkholderia mallei (strain SAVP1) GN=ppc PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.248e-26 Identity = 89/239 (37.24%), Postives = 119/239 (49.79%), Query Frame = 1 Query: 1 RLGDLIRRVVTFGMVLMKLDLRQESGRH-AEALDAITRYLDMGTYSEWDEDKKLEFLTRELKGKRPLVPPTIEVPSDVKEVLDTFR----VAAELGSDSLGAYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGT--LRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGH-QEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIK-*LFSWAKREYGRGGG 690 RL L+R FG L +DLRQ S H A + + R Y+ E KL L L RPL P ++ K L + A+ G+ ++ Y+IS SD++ V LLQK+ L G LG P L V+PLFET+ DLR A ++R ++ + + H GH QEVM+GYSDS KD G T+ WELY+A+ +V +E GIK LF GRGGG Sbjct: 455 RLAPLMRAAEVFGFHLASIDLRQSSDIHEAVVAELLARGGVEADYAALPEADKLRVLLAALADPRPLRSPYLDYSDLAKSELGVLERAHAIRAQFGARAVRNYIISHTETVSDLVEVLLLQKETGL-FEGTLGTPHANARNGLMVIPLFETIADLRNASDIMRAFFALPGVGELLA--HQGHEQEVMLGYSDSNKDGGFLTSNWELYRAELALVDLFDERGIKLRLFHGRGGTVGRGGG 690
BLAST of FC921382 vs. ExPASy Swiss-Prot
Match: CAPP_BURMA (Phosphoenolpyruvate carboxylase OS=Burkholderia mallei GN=ppc PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.248e-26 Identity = 89/239 (37.24%), Postives = 119/239 (49.79%), Query Frame = 1 Query: 1 RLGDLIRRVVTFGMVLMKLDLRQESGRH-AEALDAITRYLDMGTYSEWDEDKKLEFLTRELKGKRPLVPPTIEVPSDVKEVLDTFR----VAAELGSDSLGAYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGT--LRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGH-QEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIK-*LFSWAKREYGRGGG 690 RL L+R FG L +DLRQ S H A + + R Y+ E KL L L RPL P ++ K L + A+ G+ ++ Y+IS SD++ V LLQK+ L G LG P L V+PLFET+ DLR A ++R ++ + + H GH QEVM+GYSDS KD G T+ WELY+A+ +V +E GIK LF GRGGG Sbjct: 455 RLAPLMRAAEVFGFHLASIDLRQSSDIHEAVVAELLARGGVEADYAALPEADKLRVLLAALADPRPLRSPYLDYSDLAKSELGVLERAHAIRAQFGARAVRNYIISHTETVSDLVEVLLLQKETGL-FEGTLGTPHANARNGLMVIPLFETIADLRNASDIMRAFFALPGVGELLA--HQGHEQEVMLGYSDSNKDGGFLTSNWELYRAELALVDLFDERGIKLRLFHGRGGTVGRGGG 690
BLAST of FC921382 vs. ExPASy Swiss-Prot
Match: CAPP_BURM9 (Phosphoenolpyruvate carboxylase OS=Burkholderia mallei (strain NCTC 10229) GN=ppc PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.248e-26 Identity = 89/239 (37.24%), Postives = 119/239 (49.79%), Query Frame = 1 Query: 1 RLGDLIRRVVTFGMVLMKLDLRQESGRH-AEALDAITRYLDMGTYSEWDEDKKLEFLTRELKGKRPLVPPTIEVPSDVKEVLDTFR----VAAELGSDSLGAYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGT--LRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGH-QEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIK-*LFSWAKREYGRGGG 690 RL L+R FG L +DLRQ S H A + + R Y+ E KL L L RPL P ++ K L + A+ G+ ++ Y+IS SD++ V LLQK+ L G LG P L V+PLFET+ DLR A ++R ++ + + H GH QEVM+GYSDS KD G T+ WELY+A+ +V +E GIK LF GRGGG Sbjct: 455 RLAPLMRAAEVFGFHLASIDLRQSSDIHEAVVAELLARGGVEADYAALPEADKLRVLLAALADPRPLRSPYLDYSDLAKSELGVLERAHAIRAQFGARAVRNYIISHTETVSDLVEVLLLQKETGL-FEGTLGTPHANARNGLMVIPLFETIADLRNASDIMRAFFALPGVGELLA--HQGHEQEVMLGYSDSNKDGGFLTSNWELYRAELALVDLFDERGIKLRLFHGRGGTVGRGGG 690
BLAST of FC921382 vs. ExPASy Swiss-Prot
Match: CAPP_BURM7 (Phosphoenolpyruvate carboxylase OS=Burkholderia mallei (strain NCTC 10247) GN=ppc PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.248e-26 Identity = 89/239 (37.24%), Postives = 119/239 (49.79%), Query Frame = 1 Query: 1 RLGDLIRRVVTFGMVLMKLDLRQESGRH-AEALDAITRYLDMGTYSEWDEDKKLEFLTRELKGKRPLVPPTIEVPSDVKEVLDTFR----VAAELGSDSLGAYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGT--LRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGH-QEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIK-*LFSWAKREYGRGGG 690 RL L+R FG L +DLRQ S H A + + R Y+ E KL L L RPL P ++ K L + A+ G+ ++ Y+IS SD++ V LLQK+ L G LG P L V+PLFET+ DLR A ++R ++ + + H GH QEVM+GYSDS KD G T+ WELY+A+ +V +E GIK LF GRGGG Sbjct: 455 RLAPLMRAAEVFGFHLASIDLRQSSDIHEAVVAELLARGGVEADYAALPEADKLRVLLAALADPRPLRSPYLDYSDLAKSELGVLERAHAIRAQFGARAVRNYIISHTETVSDLVEVLLLQKETGL-FEGTLGTPHANARNGLMVIPLFETIADLRNASDIMRAFFALPGVGELLA--HQGHEQEVMLGYSDSNKDGGFLTSNWELYRAELALVDLFDERGIKLRLFHGRGGTVGRGGG 690 The following BLAST results are available for this feature:
BLAST of FC921382 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 229
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC921382 ID=FC921382; Name=FC921382; organism=Citrus clementina; type=EST; length=705bpback to top |