FC921382

Overview
NameFC921382
Unique NameFC921382
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length705
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921382 vs. ExPASy Swiss-Prot
Match: CAPP_STRSY (Phosphoenolpyruvate carboxylase OS=Streptococcus suis (strain 05ZYH33) GN=ppc PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.409e-21
Identity = 73/234 (31.20%), Postives = 122/234 (52.14%), Query Frame = 1
Query:   10 DLIRRVVTFGMVLMKLDLRQESGRH-AEALDAITRYLDMGTYSEWDEDKKLEFLTRELKGKRPLVPPTIEVPSD-VKEVLDTFRVAAEL----GSDSLGAYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGTLRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIK*LFSWAK-REYGRGGG 690
            +L+  V  FG  L  +D+RQ+S  H A   + +     +  YS   E+ K   L ++L+    ++  T    S+ +++ L  F  A EL    G + +  ++IS + + SD+L + +L K+  L V  +  R      +++VPLFET+ DL  A   +R+ L +D  ++ I  N   +QE+M+GYSDS KD G  ++ W LYKAQ ++     ++G+   F   +    GRGGG
Sbjct:  380 ELLEAVEAFGFYLASIDMRQDSSIHEASVAELLASARIVEDYSSLSEEAKCHVLLKQLETDPRILSATHMPKSEQLEKELAIFAAARELKDKLGEEIIKQHIISHSESVSDLLELAVLLKEVGL-VDVDKAR------VQIVPLFETIEDLDNAPDTMRQYLQLDLAKRWIAGNKY-YQEIMLGYSDSNKDGGYLSSGWTLYKAQNELTQIGQDYGVNITFFHGRGGTVGRGGG 605          
BLAST of FC921382 vs. ExPASy Swiss-Prot
Match: CAPP_STRS2 (Phosphoenolpyruvate carboxylase OS=Streptococcus suis (strain 98HAH33) GN=ppc PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.409e-21
Identity = 73/234 (31.20%), Postives = 122/234 (52.14%), Query Frame = 1
Query:   10 DLIRRVVTFGMVLMKLDLRQESGRH-AEALDAITRYLDMGTYSEWDEDKKLEFLTRELKGKRPLVPPTIEVPSD-VKEVLDTFRVAAEL----GSDSLGAYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGTLRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIK*LFSWAK-REYGRGGG 690
            +L+  V  FG  L  +D+RQ+S  H A   + +     +  YS   E+ K   L ++L+    ++  T    S+ +++ L  F  A EL    G + +  ++IS + + SD+L + +L K+  L V  +  R      +++VPLFET+ DL  A   +R+ L +D  ++ I  N   +QE+M+GYSDS KD G  ++ W LYKAQ ++     ++G+   F   +    GRGGG
Sbjct:  380 ELLEAVEAFGFYLASIDMRQDSSIHEASVAELLASARIVEDYSSLSEEAKCHVLLKQLETDPRILSATHMPKSEQLEKELAIFAAARELKDKLGEEIIKQHIISHSESVSDLLELAVLLKEVGL-VDVDKAR------VQIVPLFETIEDLDNAPDTMRQYLQLDLAKRWIAGNKY-YQEIMLGYSDSNKDGGYLSSGWTLYKAQNELTQIGQDYGVNITFFHGRGGTVGRGGG 605          
BLAST of FC921382 vs. ExPASy Swiss-Prot
Match: CAPP_CAUCR (Phosphoenolpyruvate carboxylase OS=Caulobacter crescentus GN=ppc PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.109e-21
Identity = 78/235 (33.19%), Postives = 107/235 (45.53%), Query Frame = 1
Query:    4 LGDLIRRVVTFGMVLMKLDLRQESGRHAEALDAITRYLDMGT-YSEWDEDKKLEFLTRELKGKRPLVPPTIEVPSDVKEVLDTFRVAA----ELGSDSLGAYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGTLRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGI-K*LFSWAKREYGRGGG 690
            L  L+      G  LM LDLRQ +  H   LD + R    G  Y + DED + + L  EL  +RPLV P      +  + L T   AA    + G   LGAY+IS ++  SD+L   +L K   L   G      P  +++V PLFET+ DL     V+R+ L +   R   I      QE+M+GYSDS KD G   +   +      +    +  G+   LF       GRGGG
Sbjct:  394 LRTLVEVAKACGFHLMSLDLRQNADVHERTLDELFRRAGTGVEYLKLDEDARCKVLIDELSHQRPLVSPFTAYGEETSKELATMEAAAQAVRDYGHGCLGAYIISKSATLSDMLEPLVLLKQVGLVWGG----AAPRASVKVAPLFETIGDLENGPAVLRQWLELPLSR--TILGDRPVQEIMLGYSDSNKDGGYVASRRGVATGASALAHEADRMGVGLQLFHGRGGSVGRGGG 622          
BLAST of FC921382 vs. ExPASy Swiss-Prot
Match: CAPP_BORPE (Phosphoenolpyruvate carboxylase OS=Bordetella pertussis GN=ppc PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 9.153e-21
Identity = 80/240 (33.33%), Postives = 110/240 (45.83%), Query Frame = 1
Query:    1 RLGDLIRRVVTFGMVLMKLDLRQESGRHAEALDAITRYLDMGTYSEWDE----DKKLEFLTRELKGKRPLVPPTIEVPSDVKEVLDTFRVAA----ELGSDSLGAYVISMASNASDVLAVELLQKDARL-AVSGELGRPCPGGTLRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIK-*LFSWAKREYGRGGG 690
            RL  L + V  FG  L  +DLRQ S  H   L  +      G   +  +    D+      REL   RPL  P I    +    L   R AA      G  ++   ++S     SD+L V +LQK+A L A  GE     PG  L VVPLFET+ DL+    ++   L +   R+ +       QEVM+GYSDS KD G  T+ W LY+A+  +V   +   ++  +F       GRGGG
Sbjct:  432 RLSGLQQAVTVFGFHLATVDLRQSSDVHERVLAELFARAGDGIDGQAVDYLALDEAARVAGRELAHARPLASPWIAYSEETASELAVLRAAAAGRARYGRQAVLQSIVSHTETLSDLLEVLVLQKEAGLIAPPGET--IAPGDGLMVVPLFETIPDLQRGPEIMAAWLDLPEVRQRVRLAQGDTQEVMLGYSDSNKDGGFLTSNWSLYQAERALVDVFSARSVRLRMFHGRGDSVGRGGG 669          
BLAST of FC921382 vs. ExPASy Swiss-Prot
Match: CAPP_STRPG (Phosphoenolpyruvate carboxylase OS=Streptococcus pyogenes serotype M5 (strain Manfredo) GN=ppc PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.039e-20
Identity = 73/236 (30.93%), Postives = 119/236 (50.42%), Query Frame = 1
Query:    4 LGDLIRRVVTFGMVLMKLDLRQESGRHAEALDAITRYLDM-GTYSEWDEDKKLEFLTRELKGKRPLVPPTIEVPSDVKEV-LDTFRVAAEL----GSDSLGAYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGTLRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIK*LFSWAK-REYGRGGG 690
            L ++++ V  FG  L  +D+RQ+S      +  + +  ++   YS   E +K + L ++L  +   +       SD+ E  L  +  A EL    G + +  ++IS   + SD+  + ++ K+  L V  +  R      +++VPLFET+ DL  A  ++   LS D  +  I  N N +QE+M+GYSDS KD G   + W LYKAQ ++ A   E G+K  F   +    GRGGG
Sbjct:  400 LREVMQAVDIFGFFLASIDMRQDSSVQEACVAELLKGANIVDDYSSLSETEKCDVLVQQLMEEPRTLSSAAVAKSDLLEKELAIYTTARELKDKLGEEVIKQHIISHTESVSDMFELAIMLKEVGL-VDQQRAR------VQIVPLFETIEDLDNARDIMAAYLSHDIVKSWIATNRN-YQEIMLGYSDSNKDGGYLASGWTLYKAQNELTAIGEEHGVKITFFHGRGGTVGRGGG 627          
BLAST of FC921382 vs. ExPASy Swiss-Prot
Match: CAPP_STRP6 (Phosphoenolpyruvate carboxylase OS=Streptococcus pyogenes serotype M6 GN=ppc PE=3 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 2.039e-20
Identity = 73/236 (30.93%), Postives = 119/236 (50.42%), Query Frame = 1
Query:    4 LGDLIRRVVTFGMVLMKLDLRQESGRHAEALDAITRYLDM-GTYSEWDEDKKLEFLTRELKGKRPLVPPTIEVPSDVKEV-LDTFRVAAEL----GSDSLGAYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGTLRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIK*LFSWAK-REYGRGGG 690
            L ++++ V  FG  L  +D+RQ+S      +  + +  ++   YS   E +K + L ++L  +   +       SD+ E  L  +  A EL    G + +  ++IS   + SD+  + ++ K+  L V  +  R      +++VPLFET+ DL  A  ++   LS D  +  I  N N +QE+M+GYSDS KD G   + W LYKAQ ++ A   E G+K  F   +    GRGGG
Sbjct:  400 LREVMQAVDIFGFFLASIDMRQDSSVQEACVAELLKGANIVDDYSSLSETEKCDVLVQQLMEEPRTLSSAAVAKSDLLEKELAIYTTARELKDKLGEEVIKQHIISHTESVSDMFELAIMLKEVGL-VDQQRAR------VQIVPLFETIEDLDNARDIMAAYLSHDIVKSWIATNRN-YQEIMLGYSDSNKDGGYLASGWTLYKAQNELTAIGEEHGVKITFFHGRGGTVGRGGG 627          
BLAST of FC921382 vs. ExPASy Swiss-Prot
Match: CAPP_STRP8 (Phosphoenolpyruvate carboxylase OS=Streptococcus pyogenes serotype M18 GN=ppc PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.663e-20
Identity = 73/236 (30.93%), Postives = 119/236 (50.42%), Query Frame = 1
Query:    4 LGDLIRRVVTFGMVLMKLDLRQESGRHAEALDAITRYLDM-GTYSEWDEDKKLEFLTRELKGKRPLVPPTIEVPSDVKEV-LDTFRVAAEL----GSDSLGAYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGTLRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIK*LFSWAK-REYGRGGG 690
            L ++++ V  FG  L  +D+RQ+S      +  + +  ++   YS   E +K + L ++L  +   +       SD+ E  L  +  A EL    G + +  ++IS   + SD+  + ++ K+  L V  +  R      +++VPLFET+ DL  A  ++   LS D  +  I  N N +QE+M+GYSDS KD G   + W LYKAQ ++ A   E G+K  F   +    GRGGG
Sbjct:  400 LREVMQAVDIFGFFLASIDMRQDSSVQEACVAELLKGANIVDDYSSLSETEKCDVLVQQLMEEPRTLSSAAVAKSDLLEKELAIYTTARELKDKLGEEVIKQHIISHTESVSDMFELAIMLKEVGL-VDQQRAR------VQIVPLFETIEDLDNACDIMAAYLSHDIVKSWIATNRN-YQEIMLGYSDSNKDGGYLASGWTLYKAQNELTAIGEEHGVKITFFHGRGGTVGRGGG 627          
BLAST of FC921382 vs. ExPASy Swiss-Prot
Match: CAPP_STRP3 (Phosphoenolpyruvate carboxylase OS=Streptococcus pyogenes serotype M3 GN=ppc PE=3 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 2.663e-20
Identity = 73/236 (30.93%), Postives = 119/236 (50.42%), Query Frame = 1
Query:    4 LGDLIRRVVTFGMVLMKLDLRQESGRHAEALDAITRYLDM-GTYSEWDEDKKLEFLTRELKGKRPLVPPTIEVPSDVKEV-LDTFRVAAEL----GSDSLGAYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGTLRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIK*LFSWAK-REYGRGGG 690
            L ++++ V  FG  L  +D+RQ+S      +  + +  ++   YS   E +K + L ++L  +   +       SD+ E  L  +  A EL    G + +  ++IS   + SD+  + ++ K+  L V  +  R      +++VPLFET+ DL  A  ++   LS D  +  I  N N +QE+M+GYSDS KD G   + W LYKAQ ++ A   E G+K  F   +    GRGGG
Sbjct:  400 LREVMQAVDIFGFFLASIDMRQDSSVQEACVAELLKGANIVDDYSSLSETEKCDVLLQQLMEEPRTLSSAAVAKSDLLEKELAIYTTARELKDKLGEEVIKQHIISHTESVSDMFELAIMLKEVGL-VDQQRAR------VQIVPLFETIEDLDNARDIMAAYLSHDIVKSWIATNRN-YQEIMLGYSDSNKDGGYLASGWTLYKAQNELTAIGEEHGVKITFFHGRGGTVGRGGG 627          
BLAST of FC921382 vs. ExPASy Swiss-Prot
Match: CAPP_STRP1 (Phosphoenolpyruvate carboxylase OS=Streptococcus pyogenes serotype M1 GN=ppc PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.663e-20
Identity = 73/236 (30.93%), Postives = 119/236 (50.42%), Query Frame = 1
Query:    4 LGDLIRRVVTFGMVLMKLDLRQESGRHAEALDAITRYLDM-GTYSEWDEDKKLEFLTRELKGKRPLVPPTIEVPSDVKEV-LDTFRVAAEL----GSDSLGAYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGTLRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIK*LFSWAK-REYGRGGG 690
            L ++++ V  FG  L  +D+RQ+S      +  + +  ++   YS   E +K + L ++L  +   +       SD+ E  L  +  A EL    G + +  ++IS   + SD+  + ++ K+  L V  +  R      +++VPLFET+ DL  A  ++   LS D  +  I  N N +QE+M+GYSDS KD G   + W LYKAQ ++ A   E G+K  F   +    GRGGG
Sbjct:  400 LREVMQAVDIFGFFLASIDMRQDSSVQEACVAELLKGANIVDDYSSLSETEKCDVLLQQLMEEPRTLSSAAVAKSDLLEKELAIYTTARELKDKLGEEVIKQHIISHTESVSDMFELAIMLKEVGL-VDQQRAR------VQIVPLFETIEDLDNARDIMAAYLSHDIVKSWIATNRN-YQEIMLGYSDSNKDGGYLASGWTLYKAQNELTAIGEEHGVKITFFHGRGGTVGRGGG 627          
The following BLAST results are available for this feature:
BLAST of FC921382 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 229
Match NameE-valueIdentityDescription
CAPP_STRSY2.409e-2131.20Phosphoenolpyruvate carboxylase OS=Streptococcus s... [more]
CAPP_STRS22.409e-2131.20Phosphoenolpyruvate carboxylase OS=Streptococcus s... [more]
CAPP_CAUCR4.109e-2133.19Phosphoenolpyruvate carboxylase OS=Caulobacter cre... [more]
CAPP_BORPE9.153e-2133.33Phosphoenolpyruvate carboxylase OS=Bordetella pert... [more]
CAPP_STRPG2.039e-2030.93Phosphoenolpyruvate carboxylase OS=Streptococcus p... [more]
CAPP_STRP62.039e-2030.93Phosphoenolpyruvate carboxylase OS=Streptococcus p... [more]
CAPP_STRP82.663e-2030.93Phosphoenolpyruvate carboxylase OS=Streptococcus p... [more]
CAPP_STRP32.663e-2030.93Phosphoenolpyruvate carboxylase OS=Streptococcus p... [more]
CAPP_STRP12.663e-2030.93Phosphoenolpyruvate carboxylase OS=Streptococcus p... [more]

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Properties
Property NameValue
Genbank descriptionC32104C12EF RVDevelopN Citrus clementina cDNA clone C32104C12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921382 ID=FC921382; Name=FC921382; organism=Citrus clementina; type=EST; length=705bp
CGGCTCGGTGATCTTATTAGGAGAGTTGTCACCTTTGGAATGGTGTTGAT
GAAGCTTGACTTGCGTCAGGAATCTGGTAGACATGCTGAAGCGCTAGATG
CAATTACGAGATATTTGGATATGGGTACATACAGTGAGTGGGACGAAGAC
AAAAAACTGGAATTTCTAACGAGGGAGTTGAAAGGAAAGCGGCCTTTAGT
TCCGCCTACTATTGAGGTTCCTTCTGATGTTAAAGAAGTCTTGGATACCT
TCCGTGTTGCTGCTGAGCTAGGGAGTGATTCACTTGGGGCATACGTCATT
TCTATGGCTTCTAATGCAAGTGATGTCCTTGCCGTAGAGCTTTTGCAGAA
AGACGCCCGACTTGCTGTTAGTGGTGAGTTAGGGAGACCATGTCCTGGTG
GAACGCTACGTGTGGTTCCTCTGTTTGAGACTGTGACGGACTTGAGAGGA
GCTGGTTTGGTGATCAGGAAATTGTTATCAATTGACTGGTATAGAAAGCA
CATTATAAAAAACCATAACGGGCATCAAGAGGTGATGGTTGGATATTCTG
ATTCTGGTAAAGATGCTGGACGCTTCACTGCTGCATGGGAACTATACAAA
GCCCAAGAGGATGTTGTGGCTGCCTGCAATGAGTTTGGTATTAAGTGACT
CTTCTCATGGGCGAAGAGGGAGTATGGCCGTGGTGGTGGCCTACATATCT
TGCAT
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