FC921382

Overview
NameFC921382
Unique NameFC921382
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length705
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC921382 vs. ExPASy Swiss-Prot
Match: CAPP_EDWI9 (Phosphoenolpyruvate carboxylase OS=Edwardsiella ictaluri (strain 93-146) GN=ppc PE=3 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 5.150e-48
Identity = 115/230 (50.00%), Postives = 139/230 (60.43%), Query Frame = 1 
Query:    1 RLGDLIRRVVTFGMVLMKLDLRQESGRHAEALDAITRYLDMGTYSEWDEDKKLEFLTRELKGKRPLVPPTIEVPSDVKEVLDTFRVAAELGSDSLGAYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGTLRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIK-*LFSWAKREYGRGG 687
            +L D +RRV  FG+ L+++D+RQES RH EAL  +TRYL +G Y  W E+ K  FL REL  KRPLVP       + KEV DT +V AE  + ++ AYVISMA   SDVLAV LL K+A           CP   L VVPLFET+ DL  A  V+ +LLSIDWYR  I     G Q VM+GYSDS KDAG   A+W  Y+AQE +V  C+  GI   LF       GRGG
Sbjct:  373 QLLDTLRRVHCFGVPLVRIDIRQESTRHTEALAELTRYLGLGDYETWSEEDKQTFLLRELNSKRPLVPRHWTPSPETKEVFDTCQVIAEAPAGAIAAYVISMARTPSDVLAVHLLLKEA----------GCP-YNLPVVPLFETLDDLNNAEAVMTQLLSIDWYRGFI----QGKQMVMIGYSDSAKDAGVMAASWAQYRAQEALVRVCDNAGIALTLFHGRGGSIGRGG 587
[Close]
BLAST of FC921382 vs. ExPASy Swiss-Prot
Match: CAPP_MARAV (Phosphoenolpyruvate carboxylase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=ppc PE=3 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 6.726e-48
Identity = 107/228 (46.93%), Postives = 141/228 (61.84%), Query Frame = 1 
Query:   10 DLIRRVVTFGMVLMKLDLRQESGRHAEALDAITRYLDMGTYSEWDEDKKLEFLTRELKGKRPLVPPTIEVPSDVKEVLDTFRVAAELGSDSLGAYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGTLRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIK-*LFSWAKREYGRGGG 690
            D IRR  TFG+ L++LD+RQE+ RHAEA+  +  YL +G Y  W E ++  FL +ELKG+RPLVP   +    V+EVL T  V A    ++LG+YVISMAS  SDVL V LL ++A +A             +RVVPLFET+ DL+GA   +  L  +DWYR++     +G QEVM+GYSDS KDAG+  AAW  Y+AQE +    N +G+   LF       GRGGG
Sbjct:  376 DTIRRAHTFGLPLIRLDIRQEASRHAEAVAEMVNYLGLGDYLSWSEQERQAFLVKELKGRRPLVPRNWQPSEPVREVLATCEVVAGQTPEALGSYVISMASKPSDVLNVILLLREAGMAF-----------PMRVVPLFETLDDLKGAPDSMAALYEVDWYREYC----SGRQEVMIGYSDSSKDAGQLMAAWAQYQAQEKLTEVANRYGVHLTLFHGRGGTVGRGGG 588
[Close]
BLAST of FC921382 vs. ExPASy Swiss-Prot
Match: CAPP_KLEP3 (Phosphoenolpyruvate carboxylase OS=Klebsiella pneumoniae (strain 342) GN=ppc PE=3 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 6.726e-48
Identity = 110/227 (48.46%), Postives = 138/227 (60.79%), Query Frame = 1 
Query:   10 DLIRRVVTFGMVLMKLDLRQESGRHAEALDAITRYLDMGTYSEWDEDKKLEFLTRELKGKRPLVPPTIEVPSDVKEVLDTFRVAAELGSDSLGAYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGTLRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIK-*LFSWAKREYGRGG 687
            D +RRV +FG+ L+++D+RQES RH EAL  +TRYL +G Y  W E  K  FL REL  KRPL+P   E   + +EVLDT +V AE    S+ AYVISMA   SDVLAV LL K+A +           G  L V PLFET+ DL  A  V+ +LL+IDWYR  I     G Q VM+GYSDS KDAG   A+W  Y+AQ+ ++  C + GI+  LF       GRGG
Sbjct:  378 DTLRRVKSFGVPLVRIDIRQESTRHTEALGEMTRYLGIGDYESWSEADKQAFLIRELNSKRPLLPRQWEPSEETREVLDTCKVIAEAPRGSIAAYVISMAKTPSDVLAVHLLLKEAGI-----------GFALPVAPLFETLDDLNNANDVMTQLLNIDWYRGFI----QGKQMVMIGYSDSAKDAGVMAASWAQYQAQDALIKTCEKAGIELTLFHGRGGSIGRGG 589
[Close]
BLAST of FC921382 vs. ExPASy Swiss-Prot
Match: CAPP_SALTY (Phosphoenolpyruvate carboxylase OS=Salmonella typhimurium GN=ppc PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 8.784e-48
Identity = 110/227 (48.46%), Postives = 138/227 (60.79%), Query Frame = 1 
Query:   10 DLIRRVVTFGMVLMKLDLRQESGRHAEALDAITRYLDMGTYSEWDEDKKLEFLTRELKGKRPLVPPTIEVPSDVKEVLDTFRVAAELGSDSLGAYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGTLRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIK-*LFSWAKREYGRGG 687
            D +RRV  FG+ L+++D+RQES RH EAL  ITRYL +G Y  W E  K  FL REL  KRPL+P   E  +D +EVL+T +V AE    S+ AYVISMA   SDVLAV LL K+A +           G  + V PLFET+ DL  A  V+ +LL+IDWYR  I     G Q VM+GYSDS KDAG   A+W  Y+AQ+ ++  C + GI+  LF       GRGG
Sbjct:  378 DTLRRVKCFGVPLVRIDIRQESTRHTEALGEITRYLGIGDYESWSEADKQAFLIRELNSKRPLLPRNWEPSNDTREVLETCKVIAEAPKGSIAAYVISMAKTPSDVLAVHLLLKEAGI-----------GFAMPVAPLFETLDDLNNADDVMTQLLNIDWYRGLI----QGKQMVMIGYSDSAKDAGVMAASWAQYQAQDALIKTCEKAGIELTLFHGRGGSIGRGG 589
[Close]
BLAST of FC921382 vs. ExPASy Swiss-Prot
Match: CAPP_SALTI (Phosphoenolpyruvate carboxylase OS=Salmonella typhi GN=ppc PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 8.784e-48
Identity = 110/227 (48.46%), Postives = 138/227 (60.79%), Query Frame = 1 
Query:   10 DLIRRVVTFGMVLMKLDLRQESGRHAEALDAITRYLDMGTYSEWDEDKKLEFLTRELKGKRPLVPPTIEVPSDVKEVLDTFRVAAELGSDSLGAYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGTLRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIK-*LFSWAKREYGRGG 687
            D +RRV  FG+ L+++D+RQES RH EAL  ITRYL +G Y  W E  K  FL REL  KRPL+P   E  +D +EVL+T +V AE    S+ AYVISMA   SDVLAV LL K+A +           G  + V PLFET+ DL  A  V+ +LL+IDWYR  I     G Q VM+GYSDS KDAG   A+W  Y+AQ+ ++  C + GI+  LF       GRGG
Sbjct:  378 DTLRRVKCFGVPLVRIDIRQESTRHTEALGEITRYLGIGDYESWSEADKQAFLIRELNSKRPLLPRNWEPSNDTREVLETCKVIAEAPKGSIAAYVISMAKTPSDVLAVHLLLKEAGI-----------GFAMPVAPLFETLDDLNNADDVMTQLLNIDWYRGLI----QGKQMVMIGYSDSAKDAGVMAASWAQYQAQDALIKTCEKAGIELTLFHGRGGSIGRGG 589
[Close]
BLAST of FC921382 vs. ExPASy Swiss-Prot
Match: CAPP_SALSV (Phosphoenolpyruvate carboxylase OS=Salmonella schwarzengrund (strain CVM19633) GN=ppc PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 8.784e-48
Identity = 110/227 (48.46%), Postives = 138/227 (60.79%), Query Frame = 1 
Query:   10 DLIRRVVTFGMVLMKLDLRQESGRHAEALDAITRYLDMGTYSEWDEDKKLEFLTRELKGKRPLVPPTIEVPSDVKEVLDTFRVAAELGSDSLGAYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGTLRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIK-*LFSWAKREYGRGG 687
            D +RRV  FG+ L+++D+RQES RH EAL  ITRYL +G Y  W E  K  FL REL  KRPL+P   E  +D +EVL+T +V AE    S+ AYVISMA   SDVLAV LL K+A +           G  + V PLFET+ DL  A  V+ +LL+IDWYR  I     G Q VM+GYSDS KDAG   A+W  Y+AQ+ ++  C + GI+  LF       GRGG
Sbjct:  378 DTLRRVKCFGVPLVRIDIRQESTRHTEALGEITRYLGIGDYESWSEADKQAFLIRELNSKRPLLPRNWEPSNDTREVLETCKVIAEAPKGSIAAYVISMAKTPSDVLAVHLLLKEAGI-----------GFAMPVAPLFETLDDLNNADDVMTQLLNIDWYRGLI----QGKQMVMIGYSDSAKDAGVMAASWAQYQAQDALIKTCEKAGIELTLFHGRGGSIGRGG 589
[Close]
BLAST of FC921382 vs. ExPASy Swiss-Prot
Match: CAPP_SALPK (Phosphoenolpyruvate carboxylase OS=Salmonella paratyphi A (strain AKU_12601) GN=ppc PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 8.784e-48
Identity = 110/227 (48.46%), Postives = 138/227 (60.79%), Query Frame = 1 
Query:   10 DLIRRVVTFGMVLMKLDLRQESGRHAEALDAITRYLDMGTYSEWDEDKKLEFLTRELKGKRPLVPPTIEVPSDVKEVLDTFRVAAELGSDSLGAYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGTLRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIK-*LFSWAKREYGRGG 687
            D +RRV  FG+ L+++D+RQES RH EAL  ITRYL +G Y  W E  K  FL REL  KRPL+P   E  +D +EVL+T +V AE    S+ AYVISMA   SDVLAV LL K+A +           G  + V PLFET+ DL  A  V+ +LL+IDWYR  I     G Q VM+GYSDS KDAG   A+W  Y+AQ+ ++  C + GI+  LF       GRGG
Sbjct:  378 DTLRRVKCFGVPLVRIDIRQESTRHTEALGEITRYLGIGDYESWSEADKQAFLIRELNSKRPLLPRNWEPSNDTREVLETCKVIAEAPKGSIAAYVISMAKTPSDVLAVHLLLKEAGI-----------GFAMPVAPLFETLDDLNNADDVMTQLLNIDWYRGLI----QGKQMVMIGYSDSAKDAGVMAASWAQYQAQDALIKTCEKAGIELTLFHGRGGSIGRGG 589
[Close]
BLAST of FC921382 vs. ExPASy Swiss-Prot
Match: CAPP_SALPC (Phosphoenolpyruvate carboxylase OS=Salmonella paratyphi C (strain RKS4594) GN=ppc PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 8.784e-48
Identity = 110/227 (48.46%), Postives = 138/227 (60.79%), Query Frame = 1 
Query:   10 DLIRRVVTFGMVLMKLDLRQESGRHAEALDAITRYLDMGTYSEWDEDKKLEFLTRELKGKRPLVPPTIEVPSDVKEVLDTFRVAAELGSDSLGAYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGTLRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIK-*LFSWAKREYGRGG 687
            D +RRV  FG+ L+++D+RQES RH EAL  ITRYL +G Y  W E  K  FL REL  KRPL+P   E  +D +EVL+T +V AE    S+ AYVISMA   SDVLAV LL K+A +           G  + V PLFET+ DL  A  V+ +LL+IDWYR  I     G Q VM+GYSDS KDAG   A+W  Y+AQ+ ++  C + GI+  LF       GRGG
Sbjct:  378 DTLRRVKCFGVPLVRIDIRQESTRHTEALGEITRYLGIGDYESWSEADKQAFLIRELNSKRPLLPRNWEPSNDTREVLETCKVIAEAPKGSIAAYVISMAKTPSDVLAVHLLLKEAGI-----------GFAMPVAPLFETLDDLNNADDVMTQLLNIDWYRGLI----QGKQMVMIGYSDSAKDAGVMAASWAQYQAQDALIKTCEKAGIELTLFHGRGGSIGRGG 589
[Close]
BLAST of FC921382 vs. ExPASy Swiss-Prot
Match: CAPP_SALPB (Phosphoenolpyruvate carboxylase OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=ppc PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 8.784e-48
Identity = 110/227 (48.46%), Postives = 138/227 (60.79%), Query Frame = 1 
Query:   10 DLIRRVVTFGMVLMKLDLRQESGRHAEALDAITRYLDMGTYSEWDEDKKLEFLTRELKGKRPLVPPTIEVPSDVKEVLDTFRVAAELGSDSLGAYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGTLRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIK-*LFSWAKREYGRGG 687
            D +RRV  FG+ L+++D+RQES RH EAL  ITRYL +G Y  W E  K  FL REL  KRPL+P   E  +D +EVL+T +V AE    S+ AYVISMA   SDVLAV LL K+A +           G  + V PLFET+ DL  A  V+ +LL+IDWYR  I     G Q VM+GYSDS KDAG   A+W  Y+AQ+ ++  C + GI+  LF       GRGG
Sbjct:  378 DTLRRVKCFGVPLVRIDIRQESTRHTEALGEITRYLGIGDYESWSEADKQAFLIRELNSKRPLLPRNWEPSNDTREVLETCKVIAEAPKGSIAAYVISMAKTPSDVLAVHLLLKEAGI-----------GFAMPVAPLFETLDDLNNADDVMTQLLNIDWYRGLI----QGKQMVMIGYSDSAKDAGVMAASWAQYQAQDALIKTCEKAGIELTLFHGRGGSIGRGG 589
[Close]
BLAST of FC921382 vs. ExPASy Swiss-Prot
Match: CAPP_SALPA (Phosphoenolpyruvate carboxylase OS=Salmonella paratyphi A GN=ppc PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 8.784e-48
Identity = 110/227 (48.46%), Postives = 138/227 (60.79%), Query Frame = 1 
Query:   10 DLIRRVVTFGMVLMKLDLRQESGRHAEALDAITRYLDMGTYSEWDEDKKLEFLTRELKGKRPLVPPTIEVPSDVKEVLDTFRVAAELGSDSLGAYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGTLRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIK-*LFSWAKREYGRGG 687
            D +RRV  FG+ L+++D+RQES RH EAL  ITRYL +G Y  W E  K  FL REL  KRPL+P   E  +D +EVL+T +V AE    S+ AYVISMA   SDVLAV LL K+A +           G  + V PLFET+ DL  A  V+ +LL+IDWYR  I     G Q VM+GYSDS KDAG   A+W  Y+AQ+ ++  C + GI+  LF       GRGG
Sbjct:  378 DTLRRVKCFGVPLVRIDIRQESTRHTEALGEITRYLGIGDYESWSEADKQAFLIRELNSKRPLLPRNWEPSNDTREVLETCKVIAEAPKGSIAAYVISMAKTPSDVLAVHLLLKEAGI-----------GFAMPVAPLFETLDDLNNADDVMTQLLNIDWYRGLI----QGKQMVMIGYSDSAKDAGVMAASWAQYQAQDALIKTCEKAGIELTLFHGRGGSIGRGG 589
The following BLAST results are available for this feature:
BLAST of FC921382 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 229
Match NameE-valueIdentityDescription
CAPP_EDWI95.150e-4850.00Phosphoenolpyruvate carboxylase OS=Edwardsiella ic... [more]
CAPP_MARAV6.726e-4846.93Phosphoenolpyruvate carboxylase OS=Marinobacter aq... [more]
CAPP_KLEP36.726e-4848.46Phosphoenolpyruvate carboxylase OS=Klebsiella pneu... [more]
CAPP_SALTY8.784e-4848.46Phosphoenolpyruvate carboxylase OS=Salmonella typh... [more]
CAPP_SALTI8.784e-4848.46Phosphoenolpyruvate carboxylase OS=Salmonella typh... [more]
CAPP_SALSV8.784e-4848.46Phosphoenolpyruvate carboxylase OS=Salmonella schw... [more]
CAPP_SALPK8.784e-4848.46Phosphoenolpyruvate carboxylase OS=Salmonella para... [more]
CAPP_SALPC8.784e-4848.46Phosphoenolpyruvate carboxylase OS=Salmonella para... [more]
CAPP_SALPB8.784e-4848.46Phosphoenolpyruvate carboxylase OS=Salmonella para... [more]
CAPP_SALPA8.784e-4848.46Phosphoenolpyruvate carboxylase OS=Salmonella para... [more]

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Properties
Property NameValue
Genbank descriptionC32104C12EF RVDevelopN Citrus clementina cDNA clone C32104C12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921382 ID=FC921382; Name=FC921382; organism=Citrus clementina; type=EST; length=705bp
CGGCTCGGTGATCTTATTAGGAGAGTTGTCACCTTTGGAATGGTGTTGAT
GAAGCTTGACTTGCGTCAGGAATCTGGTAGACATGCTGAAGCGCTAGATG
CAATTACGAGATATTTGGATATGGGTACATACAGTGAGTGGGACGAAGAC
AAAAAACTGGAATTTCTAACGAGGGAGTTGAAAGGAAAGCGGCCTTTAGT
TCCGCCTACTATTGAGGTTCCTTCTGATGTTAAAGAAGTCTTGGATACCT
TCCGTGTTGCTGCTGAGCTAGGGAGTGATTCACTTGGGGCATACGTCATT
TCTATGGCTTCTAATGCAAGTGATGTCCTTGCCGTAGAGCTTTTGCAGAA
AGACGCCCGACTTGCTGTTAGTGGTGAGTTAGGGAGACCATGTCCTGGTG
GAACGCTACGTGTGGTTCCTCTGTTTGAGACTGTGACGGACTTGAGAGGA
GCTGGTTTGGTGATCAGGAAATTGTTATCAATTGACTGGTATAGAAAGCA
CATTATAAAAAACCATAACGGGCATCAAGAGGTGATGGTTGGATATTCTG
ATTCTGGTAAAGATGCTGGACGCTTCACTGCTGCATGGGAACTATACAAA
GCCCAAGAGGATGTTGTGGCTGCCTGCAATGAGTTTGGTATTAAGTGACT
CTTCTCATGGGCGAAGAGGGAGTATGGCCGTGGTGGTGGCCTACATATCT
TGCAT
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