FC921382

Overview
NameFC921382
Unique NameFC921382
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length705
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC921382 vs. ExPASy Swiss-Prot
Match: CAPP_ECOLI (Phosphoenolpyruvate carboxylase OS=Escherichia coli (strain K12) GN=ppc PE=1 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 3.338e-47
Identity = 108/227 (47.58%), Postives = 138/227 (60.79%), Query Frame = 1 
Query:   10 DLIRRVVTFGMVLMKLDLRQESGRHAEALDAITRYLDMGTYSEWDEDKKLEFLTRELKGKRPLVPPTIEVPSDVKEVLDTFRVAAELGSDSLGAYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGTLRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIK-*LFSWAKREYGRGG 687
            D +RRV  FG+ L+++D+RQES RH EAL  +TRYL +G Y  W E  K  FL REL  KRPL+P   +  ++ +EVLDT +V AE    S+ AYVISMA   SDVLAV LL K+A +           G  + V PLFET+ DL  A  V+ +LL+IDWYR  I     G Q VM+GYSDS KDAG   A+W  Y+AQ+ ++  C + GI+  LF       GRGG
Sbjct:  378 DTLRRVKCFGVPLVRIDIRQESTRHTEALGELTRYLGIGDYESWSEADKQAFLIRELNSKRPLLPRNWQPSAETREVLDTCQVIAEAPQGSIAAYVISMAKTPSDVLAVHLLLKEAGI-----------GFAMPVAPLFETLDDLNNANDVMTQLLNIDWYRGLI----QGKQMVMIGYSDSAKDAGVMAASWAQYQAQDALIKTCEKAGIELTLFHGRGGSIGRGG 589
[Close]
BLAST of FC921382 vs. ExPASy Swiss-Prot
Match: CAPP_ECOLC (Phosphoenolpyruvate carboxylase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=ppc PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 3.338e-47
Identity = 108/227 (47.58%), Postives = 138/227 (60.79%), Query Frame = 1 
Query:   10 DLIRRVVTFGMVLMKLDLRQESGRHAEALDAITRYLDMGTYSEWDEDKKLEFLTRELKGKRPLVPPTIEVPSDVKEVLDTFRVAAELGSDSLGAYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGTLRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIK-*LFSWAKREYGRGG 687
            D +RRV  FG+ L+++D+RQES RH EAL  +TRYL +G Y  W E  K  FL REL  KRPL+P   +  ++ +EVLDT +V AE    S+ AYVISMA   SDVLAV LL K+A +           G  + V PLFET+ DL  A  V+ +LL+IDWYR  I     G Q VM+GYSDS KDAG   A+W  Y+AQ+ ++  C + GI+  LF       GRGG
Sbjct:  378 DTLRRVKCFGVPLVRIDIRQESTRHTEALGELTRYLGIGDYESWSEADKQAFLIRELNSKRPLLPRNWQPSAETREVLDTCQVIAEAPQGSIAAYVISMAKTPSDVLAVHLLLKEAGI-----------GFAMPVAPLFETLDDLNNANDVMTQLLNIDWYRGLI----QGKQMVMIGYSDSAKDAGVMAASWAQYQAQDALIKTCEKAGIELTLFHGRGGSIGRGG 589
[Close]
BLAST of FC921382 vs. ExPASy Swiss-Prot
Match: CAPP_ECOL6 (Phosphoenolpyruvate carboxylase OS=Escherichia coli O6 GN=ppc PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 3.338e-47
Identity = 108/227 (47.58%), Postives = 138/227 (60.79%), Query Frame = 1 
Query:   10 DLIRRVVTFGMVLMKLDLRQESGRHAEALDAITRYLDMGTYSEWDEDKKLEFLTRELKGKRPLVPPTIEVPSDVKEVLDTFRVAAELGSDSLGAYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGTLRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIK-*LFSWAKREYGRGG 687
            D +RRV  FG+ L+++D+RQES RH EAL  +TRYL +G Y  W E  K  FL REL  KRPL+P   +  ++ +EVLDT +V AE    S+ AYVISMA   SDVLAV LL K+A +           G  + V PLFET+ DL  A  V+ +LL+IDWYR  I     G Q VM+GYSDS KDAG   A+W  Y+AQ+ ++  C + GI+  LF       GRGG
Sbjct:  378 DTLRRVKCFGVPLVRIDIRQESTRHTEALGELTRYLGIGDYESWSEADKQAFLIRELNSKRPLLPRNWQPSAETREVLDTCQVIAEAPQGSIAAYVISMAKTPSDVLAVHLLLKEAGI-----------GFAMPVAPLFETLDDLNNANDVMTQLLNIDWYRGLI----QGKQMVMIGYSDSAKDAGVMAASWAQYQAQDALIKTCEKAGIELTLFHGRGGSIGRGG 589
[Close]
BLAST of FC921382 vs. ExPASy Swiss-Prot
Match: CAPP_ECOL5 (Phosphoenolpyruvate carboxylase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=ppc PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 3.338e-47
Identity = 108/227 (47.58%), Postives = 138/227 (60.79%), Query Frame = 1 
Query:   10 DLIRRVVTFGMVLMKLDLRQESGRHAEALDAITRYLDMGTYSEWDEDKKLEFLTRELKGKRPLVPPTIEVPSDVKEVLDTFRVAAELGSDSLGAYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGTLRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIK-*LFSWAKREYGRGG 687
            D +RRV  FG+ L+++D+RQES RH EAL  +TRYL +G Y  W E  K  FL REL  KRPL+P   +  ++ +EVLDT +V AE    S+ AYVISMA   SDVLAV LL K+A +           G  + V PLFET+ DL  A  V+ +LL+IDWYR  I     G Q VM+GYSDS KDAG   A+W  Y+AQ+ ++  C + GI+  LF       GRGG
Sbjct:  378 DTLRRVKCFGVPLVRIDIRQESTRHTEALGELTRYLGIGDYESWSEADKQAFLIRELNSKRPLLPRNWQPSAETREVLDTCQVIAEAPQGSIAAYVISMAKTPSDVLAVHLLLKEAGI-----------GFAMPVAPLFETLDDLNNANDVMTQLLNIDWYRGLI----QGKQMVMIGYSDSAKDAGVMAASWAQYQAQDALIKTCEKAGIELTLFHGRGGSIGRGG 589
[Close]
BLAST of FC921382 vs. ExPASy Swiss-Prot
Match: CAPP_ECOK1 (Phosphoenolpyruvate carboxylase OS=Escherichia coli O1:K1 / APEC GN=ppc PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 3.338e-47
Identity = 108/227 (47.58%), Postives = 138/227 (60.79%), Query Frame = 1 
Query:   10 DLIRRVVTFGMVLMKLDLRQESGRHAEALDAITRYLDMGTYSEWDEDKKLEFLTRELKGKRPLVPPTIEVPSDVKEVLDTFRVAAELGSDSLGAYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGTLRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIK-*LFSWAKREYGRGG 687
            D +RRV  FG+ L+++D+RQES RH EAL  +TRYL +G Y  W E  K  FL REL  KRPL+P   +  ++ +EVLDT +V AE    S+ AYVISMA   SDVLAV LL K+A +           G  + V PLFET+ DL  A  V+ +LL+IDWYR  I     G Q VM+GYSDS KDAG   A+W  Y+AQ+ ++  C + GI+  LF       GRGG
Sbjct:  378 DTLRRVKCFGVPLVRIDIRQESTRHTEALGELTRYLGIGDYESWSEADKQAFLIRELNSKRPLLPRNWQPSAETREVLDTCQVIAEAPQGSIAAYVISMAKTPSDVLAVHLLLKEAGI-----------GFAMPVAPLFETLDDLNNANDVMTQLLNIDWYRGLI----QGKQMVMIGYSDSAKDAGVMAASWAQYQAQDALIKTCEKAGIELTLFHGRGGSIGRGG 589
[Close]
BLAST of FC921382 vs. ExPASy Swiss-Prot
Match: CAPP_ECOHS (Phosphoenolpyruvate carboxylase OS=Escherichia coli O9:H4 (strain HS) GN=ppc PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 3.338e-47
Identity = 108/227 (47.58%), Postives = 138/227 (60.79%), Query Frame = 1 
Query:   10 DLIRRVVTFGMVLMKLDLRQESGRHAEALDAITRYLDMGTYSEWDEDKKLEFLTRELKGKRPLVPPTIEVPSDVKEVLDTFRVAAELGSDSLGAYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGTLRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIK-*LFSWAKREYGRGG 687
            D +RRV  FG+ L+++D+RQES RH EAL  +TRYL +G Y  W E  K  FL REL  KRPL+P   +  ++ +EVLDT +V AE    S+ AYVISMA   SDVLAV LL K+A +           G  + V PLFET+ DL  A  V+ +LL+IDWYR  I     G Q VM+GYSDS KDAG   A+W  Y+AQ+ ++  C + GI+  LF       GRGG
Sbjct:  378 DTLRRVKCFGVPLVRIDIRQESTRHTEALGELTRYLGIGDYESWSEADKQAFLIRELNSKRPLLPRNWQPSAETREVLDTCQVIAEAPQGSIAAYVISMAKTPSDVLAVHLLLKEAGI-----------GFAMPVAPLFETLDDLNNANDVMTQLLNIDWYRGLI----QGKQMVMIGYSDSAKDAGVMAASWAQYQAQDALIKTCEKAGIELTLFHGRGGSIGRGG 589
[Close]
BLAST of FC921382 vs. ExPASy Swiss-Prot
Match: CAPP_ECODH (Phosphoenolpyruvate carboxylase OS=Escherichia coli (strain K12 / DH10B) GN=ppc PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 3.338e-47
Identity = 108/227 (47.58%), Postives = 138/227 (60.79%), Query Frame = 1 
Query:   10 DLIRRVVTFGMVLMKLDLRQESGRHAEALDAITRYLDMGTYSEWDEDKKLEFLTRELKGKRPLVPPTIEVPSDVKEVLDTFRVAAELGSDSLGAYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGTLRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIK-*LFSWAKREYGRGG 687
            D +RRV  FG+ L+++D+RQES RH EAL  +TRYL +G Y  W E  K  FL REL  KRPL+P   +  ++ +EVLDT +V AE    S+ AYVISMA   SDVLAV LL K+A +           G  + V PLFET+ DL  A  V+ +LL+IDWYR  I     G Q VM+GYSDS KDAG   A+W  Y+AQ+ ++  C + GI+  LF       GRGG
Sbjct:  378 DTLRRVKCFGVPLVRIDIRQESTRHTEALGELTRYLGIGDYESWSEADKQAFLIRELNSKRPLLPRNWQPSAETREVLDTCQVIAEAPQGSIAAYVISMAKTPSDVLAVHLLLKEAGI-----------GFAMPVAPLFETLDDLNNANDVMTQLLNIDWYRGLI----QGKQMVMIGYSDSAKDAGVMAASWAQYQAQDALIKTCEKAGIELTLFHGRGGSIGRGG 589
[Close]
BLAST of FC921382 vs. ExPASy Swiss-Prot
Match: CAPP_ECOBW (Phosphoenolpyruvate carboxylase OS=Escherichia coli (strain K12 / BW2952) GN=ppc PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 3.338e-47
Identity = 108/227 (47.58%), Postives = 138/227 (60.79%), Query Frame = 1 
Query:   10 DLIRRVVTFGMVLMKLDLRQESGRHAEALDAITRYLDMGTYSEWDEDKKLEFLTRELKGKRPLVPPTIEVPSDVKEVLDTFRVAAELGSDSLGAYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGTLRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIK-*LFSWAKREYGRGG 687
            D +RRV  FG+ L+++D+RQES RH EAL  +TRYL +G Y  W E  K  FL REL  KRPL+P   +  ++ +EVLDT +V AE    S+ AYVISMA   SDVLAV LL K+A +           G  + V PLFET+ DL  A  V+ +LL+IDWYR  I     G Q VM+GYSDS KDAG   A+W  Y+AQ+ ++  C + GI+  LF       GRGG
Sbjct:  378 DTLRRVKCFGVPLVRIDIRQESTRHTEALGELTRYLGIGDYESWSEADKQAFLIRELNSKRPLLPRNWQPSAETREVLDTCQVIAEAPQGSIAAYVISMAKTPSDVLAVHLLLKEAGI-----------GFAMPVAPLFETLDDLNNANDVMTQLLNIDWYRGLI----QGKQMVMIGYSDSAKDAGVMAASWAQYQAQDALIKTCEKAGIELTLFHGRGGSIGRGG 589
[Close]
BLAST of FC921382 vs. ExPASy Swiss-Prot
Match: CAPP_ECO8A (Phosphoenolpyruvate carboxylase OS=Escherichia coli O8 (strain IAI1) GN=ppc PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 3.338e-47
Identity = 108/227 (47.58%), Postives = 138/227 (60.79%), Query Frame = 1 
Query:   10 DLIRRVVTFGMVLMKLDLRQESGRHAEALDAITRYLDMGTYSEWDEDKKLEFLTRELKGKRPLVPPTIEVPSDVKEVLDTFRVAAELGSDSLGAYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGTLRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIK-*LFSWAKREYGRGG 687
            D +RRV  FG+ L+++D+RQES RH EAL  +TRYL +G Y  W E  K  FL REL  KRPL+P   +  ++ +EVLDT +V AE    S+ AYVISMA   SDVLAV LL K+A +           G  + V PLFET+ DL  A  V+ +LL+IDWYR  I     G Q VM+GYSDS KDAG   A+W  Y+AQ+ ++  C + GI+  LF       GRGG
Sbjct:  378 DTLRRVKCFGVPLVRIDIRQESTRHTEALGELTRYLGIGDYESWSEADKQAFLIRELNSKRPLLPRNWQPSAETREVLDTCQVIAEAPQGSIAAYVISMAKTPSDVLAVHLLLKEAGI-----------GFAMPVAPLFETLDDLNNANDVMTQLLNIDWYRGLI----QGKQMVMIGYSDSAKDAGVMAASWAQYQAQDALIKTCEKAGIELTLFHGRGGSIGRGG 589
[Close]
BLAST of FC921382 vs. ExPASy Swiss-Prot
Match: CAPP_ECO81 (Phosphoenolpyruvate carboxylase OS=Escherichia coli O81 (strain ED1a) GN=ppc PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 3.338e-47
Identity = 108/227 (47.58%), Postives = 138/227 (60.79%), Query Frame = 1 
Query:   10 DLIRRVVTFGMVLMKLDLRQESGRHAEALDAITRYLDMGTYSEWDEDKKLEFLTRELKGKRPLVPPTIEVPSDVKEVLDTFRVAAELGSDSLGAYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGTLRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIK-*LFSWAKREYGRGG 687
            D +RRV  FG+ L+++D+RQES RH EAL  +TRYL +G Y  W E  K  FL REL  KRPL+P   +  ++ +EVLDT +V AE    S+ AYVISMA   SDVLAV LL K+A +           G  + V PLFET+ DL  A  V+ +LL+IDWYR  I     G Q VM+GYSDS KDAG   A+W  Y+AQ+ ++  C + GI+  LF       GRGG
Sbjct:  378 DTLRRVKCFGVPLVRIDIRQESTRHTEALGELTRYLGIGDYESWSEADKQAFLIRELNSKRPLLPRNWQPSAETREVLDTCQVIAEAPQGSIAAYVISMAKTPSDVLAVHLLLKEAGI-----------GFAMPVAPLFETLDDLNNANDVMTQLLNIDWYRGLI----QGKQMVMIGYSDSAKDAGVMAASWAQYQAQDALIKTCEKAGIELTLFHGRGGSIGRGG 589
The following BLAST results are available for this feature:
BLAST of FC921382 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 229
Match NameE-valueIdentityDescription
CAPP_ECOLI3.338e-4747.58Phosphoenolpyruvate carboxylase OS=Escherichia col... [more]
CAPP_ECOLC3.338e-4747.58Phosphoenolpyruvate carboxylase OS=Escherichia col... [more]
CAPP_ECOL63.338e-4747.58Phosphoenolpyruvate carboxylase OS=Escherichia col... [more]
CAPP_ECOL53.338e-4747.58Phosphoenolpyruvate carboxylase OS=Escherichia col... [more]
CAPP_ECOK13.338e-4747.58Phosphoenolpyruvate carboxylase OS=Escherichia col... [more]
CAPP_ECOHS3.338e-4747.58Phosphoenolpyruvate carboxylase OS=Escherichia col... [more]
CAPP_ECODH3.338e-4747.58Phosphoenolpyruvate carboxylase OS=Escherichia col... [more]
CAPP_ECOBW3.338e-4747.58Phosphoenolpyruvate carboxylase OS=Escherichia col... [more]
CAPP_ECO8A3.338e-4747.58Phosphoenolpyruvate carboxylase OS=Escherichia col... [more]
CAPP_ECO813.338e-4747.58Phosphoenolpyruvate carboxylase OS=Escherichia col... [more]

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Properties
Property NameValue
Genbank descriptionC32104C12EF RVDevelopN Citrus clementina cDNA clone C32104C12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921382 ID=FC921382; Name=FC921382; organism=Citrus clementina; type=EST; length=705bp
CGGCTCGGTGATCTTATTAGGAGAGTTGTCACCTTTGGAATGGTGTTGAT
GAAGCTTGACTTGCGTCAGGAATCTGGTAGACATGCTGAAGCGCTAGATG
CAATTACGAGATATTTGGATATGGGTACATACAGTGAGTGGGACGAAGAC
AAAAAACTGGAATTTCTAACGAGGGAGTTGAAAGGAAAGCGGCCTTTAGT
TCCGCCTACTATTGAGGTTCCTTCTGATGTTAAAGAAGTCTTGGATACCT
TCCGTGTTGCTGCTGAGCTAGGGAGTGATTCACTTGGGGCATACGTCATT
TCTATGGCTTCTAATGCAAGTGATGTCCTTGCCGTAGAGCTTTTGCAGAA
AGACGCCCGACTTGCTGTTAGTGGTGAGTTAGGGAGACCATGTCCTGGTG
GAACGCTACGTGTGGTTCCTCTGTTTGAGACTGTGACGGACTTGAGAGGA
GCTGGTTTGGTGATCAGGAAATTGTTATCAATTGACTGGTATAGAAAGCA
CATTATAAAAAACCATAACGGGCATCAAGAGGTGATGGTTGGATATTCTG
ATTCTGGTAAAGATGCTGGACGCTTCACTGCTGCATGGGAACTATACAAA
GCCCAAGAGGATGTTGTGGCTGCCTGCAATGAGTTTGGTATTAAGTGACT
CTTCTCATGGGCGAAGAGGGAGTATGGCCGTGGTGGTGGCCTACATATCT
TGCAT
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