FC921388

Overview
NameFC921388
Unique NameFC921388
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length696
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921388 vs. ExPASy Swiss-Prot
Match: PEPT1_PSOOV (Peptidase 1 OS=Psoroptes ovis PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.017e-13
Identity = 50/153 (32.68%), Postives = 72/153 (47.06%), Query Frame = 1
Query:  217 FSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYL-------GLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLXTGKLVSLSEQQLVDC--DHEC 648
            F  FKK FNK Y + E        F A+L      + ++ +    + QFSD++  EF+  YL        L+++  L   A    I   N +P + D R  G V  +K+Q +CGSCW+FS    +E          + LSEQ+LVDC   H C
Sbjct:   26 FEEFKKAFNKHYVTPEAEQEARQNFLASL------EHIEKAGKGRINQFSDMSLEEFKNQYLMSDQAYEALKKEFDLDAGAQACQIGAVN-IPNEIDLRALGYVTKIKNQVACGSCWAFSGVATVESNYLSYDNVSLDLSEQELVDCASQHGC 171          
BLAST of FC921388 vs. ExPASy Swiss-Prot
Match: PEPT1_DERPT (Peptidase 1 OS=Dermatophagoides pteronyssinus GN=DERP1 PE=1 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 2.604e-12
Identity = 47/151 (31.13%), Postives = 71/151 (47.02%), Query Frame = 1
Query:  217 FSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRR-----KLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLXTGKLVSLSEQQLVDC--DHEC 648
            F  +KK FNK+YA+ E+ +     F  ++       K   S    +   SDL+  EF+  +L         K +   +A+        + PA+ D R+   V P++ QG CGSCW+FS   A E A      + + L+EQ+LVDC   H C
Sbjct:   26 FEEYKKAFNKSYATFEDEEAARKNFLESV-------KYVQSNGGAINHLSDLSLDEFKNRFLMSAEAFEHLKTQFDLNAETNACSINGNAPAEIDLRQMRTVTPIRMQGGCGSCWAFSGVAATESAYLAYRNQSLDLAEQELVDCASQHGC 169          
BLAST of FC921388 vs. ExPASy Swiss-Prot
Match: CYSP_PLAVN (Cysteine proteinase OS=Plasmodium vinckei PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.576e-12
Identity = 54/189 (28.57%), Postives = 82/189 (43.39%), Query Frame = 1
Query:  178 ESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKL----DPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILP----------------TNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLXTGKL-VSLSEQQLVDCDHECDPEETGSCDSG 681
            ES  +++  A   F   K+  NK Y + +E  +RF  FK    +  +  ++      +    V Q+SD +  EF   +   ++ L +P D     I+P                + D P   D+R K    P KDQG+CGSCW+F+  G  E        ++ +S SEQQ+VDC       E   CD G
Sbjct:  150 ESMQDNIKYASKFFKYMKEN-NKKYENMDEQLQRFENFKIRYMKTQKHNEMVGKNGLTYVQKVNQYSDFSKEEFDNYF---KKLLSVPMDLKSKYIVPLKKHLANTNLISVDNKSKDFPDSRDYRSKFNFLPPKDQGNCGSCWAFAAIGNFEYLYVHTRHEMPISFSEQQMVDCS-----TENYGCDGG 329          
BLAST of FC921388 vs. ExPASy Swiss-Prot
Match: CYSP_PLAVS (Cysteine proteinase OS=Plasmodium vivax (strain Salvador I) PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.292e-11
Identity = 45/162 (27.78%), Postives = 75/162 (46.30%), Query Frame = 1
Query:  217 FSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTN---------------------DLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLXTGK-LVSLSEQQLVDC 636
            F  F  K+ ++Y    E   ++  FK N  +  +  + +      V QFSD +  +F   +   R+ + +P    +  ++P +                     D+P   D+REKG V   KDQG CGSCW+F++ G +E        K +++LSEQ++VDC
Sbjct:  237 FFNFMNKYKRSYKDINEQMEKYKNFKMNYLKIKKHNETNQMYKMKVNQFSDYSKKDFESYF---RKLVPIPDHLKKKYVVPFSSMNNGKGKNVVTSSSGANLLADVPEILDYREKGIVHEPKDQGLCGSCWAFASVGNVECMYAKEHNKTILTLSEQEVVDC 395          
BLAST of FC921388 vs. ExPASy Swiss-Prot
Match: PEPT1_EURMA (Peptidase 1 OS=Euroglyphus maynei GN=EURM1 PE=1 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 2.879e-11
Identity = 47/146 (32.19%), Postives = 69/146 (47.26%), Query Frame = 1
Query:  217 FSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYL---GLRRKLRLPKDADQ---APILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLXTGKLVSLSEQQLVDC 636
            F  FKK FNK YA+ E+ +     F  +L       K   S    +   SDL+  EF+  +L       +L+   D +    A  + +  LP++ D R    V P++ QG CGSCW+FS   + E A        + L+EQ+LVDC
Sbjct:   26 FEEFKKAFNKTYATPEKEEVARKNFLESL-------KYVESNKGAINHLSDLSLDEFKNQFLMNANAFEQLKTQFDLNAETYACSINSVSLPSELDLRSLRTVTPIRMQGGCGSCWAFSGVASTESAYLAYRNMSLDLAEQELVDC 164          
The following BLAST results are available for this feature:
BLAST of FC921388 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
PEPT1_PSOOV4.017e-1332.68Peptidase 1 OS=Psoroptes ovis PE=1 SV=1[more]
PEPT1_DERPT2.604e-1231.13Peptidase 1 OS=Dermatophagoides pteronyssinus GN=D... [more]
CYSP_PLAVN7.576e-1228.57Cysteine proteinase OS=Plasmodium vinckei PE=3 SV=... [more]
CYSP_PLAVS1.292e-1127.78Cysteine proteinase OS=Plasmodium vivax (strain Sa... [more]
PEPT1_EURMA2.879e-1132.19Peptidase 1 OS=Euroglyphus maynei GN=EURM1 PE=1 SV... [more]

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Properties
Property NameValue
Genbank descriptionC32104D06EF RVDevelopN Citrus clementina cDNA clone C32104D06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921388 ID=FC921388; Name=FC921388; organism=Citrus clementina; type=EST; length=696bp
GAACGAACGCTTCTATTGATATCAGCATTGTCTAAAAGCATGGGATCTAA
AACAGTAGTTTTCTTTCTGGTCTCTCTCGTCGTCGTCTCCGCCGTTTCAT
CAGGGACGTTGATCGACGATGTTGATCAGCTGATCAGGCAAGTAACGGAC
GGCGGTGACGAGATCCTAAGCCACCACGAGAGCACCAACAACGACCTCTT
GGGCGCAGAGCACCACTTCTCCCTATTCAAGAAGAAGTTCAATAAAGCGT
ACGCTTCGCAGGAGGAGCACGACCGTAGGTTCACTATTTTCAAGGCCAAC
TTGCGACGCGCCGCGCGTCGCCAGAAGCTCGACCCGAGCGCCACCCACGG
CGTCACTCAGTTCTCCGACTTGACTCCGGCCGAGTTCCGCCGGACGTACC
TTGGCCTCAGGAGGAAGCTGAGGCTGCCTAAGGATGCGGATCAGGCGCCG
ATCTTGCCTACGAATGATTTGCCGGCGGATTTTGATTGGAGAGAGAAGGG
CGCTGTAGGCCCTGTTAAAGATCAGGGTTCATGCGGATCATGCTGGAGTT
TCAGTACAACAGGGGCCTTGGAAGGTGCTAACTTCCTGGNCACTGGAAAG
CTTGTGAGCCTCAGTGAGCAACAGCTTGTGGATTGCGATCATGAGTGTGA
TCCTGAGGAAACAGGTTCTTGTGATTCTGGGATGCATGGTGGGCTT
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