FC921388

Overview
NameFC921388
Unique NameFC921388
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length696
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921388 vs. ExPASy Swiss-Prot
Match: CATS_BOVIN (Cathepsin S OS=Bos taurus GN=CTSS PE=1 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 2.350e-21
Identity = 59/147 (40.14%), Postives = 74/147 (50.34%), Query Frame = 1
Query:  208 EHHFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATH----GVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLXTGKLVSLSEQQLVDC 636
            +HH+ L+KK + K Y  + E   R  I++ NL+             H    G+    D+T  E       LR   + P++       P   LP   DWREKG V  VK QG+CGSCW+FS  GALE    L TGKLVSLS Q LVDC
Sbjct:   25 DHHWDLWKKTYGKQYKEKNEEVARRLIWEKNLKTVTLHNLEHSMGMHSYELGMNHLGDMTSEEVISLMSSLRVPSQWPRNVTYKSD-PNQKLPDSMDWREKGCVTEVKYQGACGSCWAFSAVGALEAQVKLKTGKLVSLSAQNLVDC 170          
BLAST of FC921388 vs. ExPASy Swiss-Prot
Match: CATL1_PIG (Cathepsin L1 OS=Sus scrofa GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.350e-21
Identity = 62/158 (39.24%), Postives = 86/158 (54.43%), Query Frame = 1
Query:  226 FKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQ----FSDLTPAEFRRTYLGLR-RKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLXTGKLVSLSEQQLVDCDHECDPEETGSCDSGM 684
            +K    + Y   EE  RR  +++ N++      +      HG +     F D+T  EFR+   G + +K +  K   ++ +L   ++P   DWREKG V  VK+QG CGSCW+FS TGALEG  F  TGKLVSLSEQ LVDC     P+    C+ G+
Sbjct:   32 WKATHGRLYGMNEEGWRR-AVWEKNMKMIELHNQEYSQGKHGFSMAMNAFGDMTNEEFRQVMNGFQNQKHKKGKVFHESLVL---EVPKSVDWREKGYVTAVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSR---PQGNQGCNGGL 182          
BLAST of FC921388 vs. ExPASy Swiss-Prot
Match: CATH_BOVIN (Cathepsin H OS=Bos taurus GN=CTSH PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.350e-21
Identity = 62/145 (42.76%), Postives = 81/145 (55.86%), Query Frame = 1
Query:  214 HFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAP---ILPTNDLPADFDWREKGA-VGPVKDQGSCGSCWSFSTTGALEGANFLXTGKLVSLSEQQLVDC 636
            HF  +  +  K Y+S EE+  R   F +NLR        + +   G+ QFSD++  E +R YL        P++        +  T   P   DWR+KG  V PVK+QGSCGSCW+FSTTGALE A  + TGKL  L+EQQLVDC
Sbjct:   34 HFQSWMVQHQKKYSS-EEYYHRLQAFASNLREINAHNARNHTFKMGLNQFSDMSFDELKRKYLWSE-----PQNCSATKSNYLRGTGPYPPSMDWRKKGNFVTPVKNQGSCGSCWTFSTTGALESAVAIATGKLPFLAEQQLVDC 172          
BLAST of FC921388 vs. ExPASy Swiss-Prot
Match: CPR4_ARATH (Probable cysteine proteinase At4g11320 OS=Arabidopsis thaliana GN=At4g11320 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.069e-21
Identity = 62/147 (42.18%), Postives = 82/147 (55.78%), Query Frame = 1
Query:  217 FSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLR-RKLRLPKDADQAPILPTND---LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLXTGKLVSLSEQQLVDCDHE 645
            F  +  K  K Y S  E +RR TIF+ NLR    R   + S   G+ +F+DL+  E+     G   R  R       +    T+D   LP   DWR +GAV  VKDQG C SCW+FST GA+EG N + TG+LV+LSEQ L++C+ E
Sbjct:   56 FESWMVKHGKVYDSVAEKERRLTIFEDNLRFITNRNAENLSYRLGLNRFADLSLHEYGEICHGADPRPPRNHVFMTSSNRYKTSDGDVLPKSVDWRNEGAVTEVKDQGLCRSCWAFSTVGAVEGLNKIVTGELVTLSEQDLINCNKE 202          
BLAST of FC921388 vs. ExPASy Swiss-Prot
Match: CATL_DROME (Cathepsin L OS=Drosophila melanogaster GN=Cp1 PE=1 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 3.069e-21
Identity = 71/179 (39.66%), Postives = 95/179 (53.07%), Query Frame = 1
Query:  193 DLLGAEHHFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKL----DPSATHGVTQFSDLTPAEFRRTYLG----LRRKLRLPKDADQAP--ILPTN-DLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLXTGKLVSLSEQQLVDCDHECDPEETGSCDSGMHGGL 696
            D++  E H   FK +  K Y  + E   R  IF  N  + A+  +       S    V +++DL   EFR+   G    L ++LR   ++ +    I P +  LP   DWR KGAV  VKDQG CGSCW+FS+TGALEG +F  +G LVSLSEQ LVDC        T   ++G +GGL
Sbjct:   53 DVVMEEWH--TFKLEHRKNYQDETEERFRLKIFNENKHKIAKHNQRFAEGKVSFKLAVNKYADLLHHEFRQLMNGFNYTLHKQLRAADESFKGVTFISPAHVTLPKSVDWRTKGAVTAVKDQGHCGSCWAFSSTGALEGQHFRKSGVLVSLSEQNLVDC-------STKYGNNGCNGGL 222          
BLAST of FC921388 vs. ExPASy Swiss-Prot
Match: CYSP4_DICDI (Cysteine proteinase 4 OS=Dictyostelium discoideum GN=cprD PE=2 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 4.008e-21
Identity = 61/160 (38.12%), Postives = 87/160 (54.37%), Query Frame = 1
Query:  217 FSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPAD-FDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLXTG---KLVSLSEQQLVDCDHECDPEETGSCDSGM 684
            F+ + +   + Y+S EE + R+ IFK+N+    +          G+  F+D+T  E+R TYLG           ++  I  T   PA   DWR +GAV P+K+QG CG CWSFSTTG+ EGA+F+ +G    LVSLSEQ L+DC           C+ G+
Sbjct:   30 FTNWMQAHQRTYSS-EEFNARYQIFKSNMDYVHQWNSKGGETVLGLNVFADITNQEYRTTYLGTPFDGSALIGTEEEKIFST---PAPTVDWRAQGAVTPIKNQGQCGGCWSFSTTGSTEGAHFIASGTKKDLVSLSEQNLIDCSKSYG---NNGCEGGL 182          
BLAST of FC921388 vs. ExPASy Swiss-Prot
Match: CATS_CANFA (Cathepsin S OS=Canis familiaris GN=CTSS PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.008e-21
Identity = 61/153 (39.87%), Postives = 79/153 (51.63%), Query Frame = 1
Query:  208 EHHFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATH----GVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTND---LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLXTGKLVSLSEQQLVDCDHE 645
            +HH++L+KK ++K Y  + E   R  I++ NL+             H    G+    D+T  E     + L   LR+P    +     +N    LP   DWREKG V  VK QGSCG+CW+FS  GALE    L TGKLVSLS Q LVDC  E
Sbjct:   25 DHHWNLWKKTYSKQYKEENEEVARRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTGEEV----ISLMGSLRVPSQWQRNVTYRSNSNQKLPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTE 173          
BLAST of FC921388 vs. ExPASy Swiss-Prot
Match: CATV_NPVHZ (Viral cathepsin OS=Heliothis zea nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.234e-21
Identity = 62/179 (34.64%), Postives = 88/179 (49.16%), Query Frame = 1
Query:  205 AEHHFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQK------------LDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPIL---PTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLXTGKLVSLSEQQLVDCDHECDPEETGSCDSGMHGGL 696
            +E +F  F +++NK+Y   +E+  R+ +FK NL +   + +            L  SA  GV +FSD TP E   +  G    L       +  I+   P   LP  +DWR+   V P+KDQG CGSCW+F   G +E    +   KL+ LSEQQL+DCD           D G +GGL
Sbjct:   53 SEIYFKHFLQQYNKSYDDPKEYQYRYNVFKDNLNKINSQNRENLLNNKNNNDSLSTSAQFGVNKFSDKTPDEVLHSNTGFFLNLSQHYTLCENRIVKGAPDIRLPDYYDWRDTNKVTPIKDQGVCGSCWAFVAIGNIESQYAIRHNKLIDLSEQQLLDCD---------EVDLGCNGGL 222          
BLAST of FC921388 vs. ExPASy Swiss-Prot
Match: CATL2_HUMAN (Cathepsin L2 OS=Homo sapiens GN=CTSL2 PE=1 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 5.234e-21
Identity = 65/157 (41.40%), Postives = 82/157 (52.23%), Query Frame = 1
Query:  226 FKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQ----FSDLTPAEFRRTYLGLR-RKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLXTGKLVSLSEQQLVDCDHECDPEETGSCDSG 681
            +K    + Y + EE  RR  +++ N++             HG T     F D+T  EFR+     R +K R  K   +   L   DLP   DWR+KG V PVK+Q  CGSCW+FS TGALEG  F  TGKLVSLSEQ LVDC     P+    C+ G
Sbjct:   32 WKATHRRLYGANEEGWRR-AVWEKNMKMIELHNGEYSQGKHGFTMAMNAFGDMTNEEFRQMMGCFRNQKFRKGKVFREPLFL---DLPKSVDWRKKGYVTPVKNQKQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSR---PQGNQGCNGG 181          
BLAST of FC921388 vs. ExPASy Swiss-Prot
Match: CATS_SAIBB (Cathepsin S OS=Saimiri boliviensis boliviensis GN=CTSS PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.166e-20
Identity = 60/153 (39.22%), Postives = 78/153 (50.98%), Query Frame = 1
Query:  208 EHHFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATH----GVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTND---LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLXTGKLVSLSEQQLVDCDHE 645
            +HH++L+KK + K Y  + E   R  I++ NL+             H    G+    D+T  E     + L   LR+P    +     +N    LP   DWREKG V  VK QGSCG+CW+FS  GALE    L TGKLVSLS Q LVDC  +
Sbjct:   25 DHHWNLWKKTYGKQYKEKNEEAVRRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTSEEV----MSLMSSLRVPNQWQRNITYKSNPNQMLPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSEK 173          
The following BLAST results are available for this feature:
BLAST of FC921388 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
CATS_BOVIN2.350e-2140.14Cathepsin S OS=Bos taurus GN=CTSS PE=1 SV=2[more]
CATL1_PIG2.350e-2139.24Cathepsin L1 OS=Sus scrofa GN=CTSL1 PE=2 SV=1[more]
CATH_BOVIN2.350e-2142.76Cathepsin H OS=Bos taurus GN=CTSH PE=2 SV=1[more]
CPR4_ARATH3.069e-2142.18Probable cysteine proteinase At4g11320 OS=Arabidop... [more]
CATL_DROME3.069e-2139.66Cathepsin L OS=Drosophila melanogaster GN=Cp1 PE=1... [more]
CYSP4_DICDI4.008e-2138.13Cysteine proteinase 4 OS=Dictyostelium discoideum ... [more]
CATS_CANFA4.008e-2139.87Cathepsin S OS=Canis familiaris GN=CTSS PE=2 SV=1[more]
CATV_NPVHZ5.234e-2134.64Viral cathepsin OS=Heliothis zea nuclear polyhedro... [more]
CATL2_HUMAN5.234e-2141.40Cathepsin L2 OS=Homo sapiens GN=CTSL2 PE=1 SV=2[more]
CATS_SAIBB1.166e-2039.22Cathepsin S OS=Saimiri boliviensis boliviensis GN=... [more]

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Properties
Property NameValue
Genbank descriptionC32104D06EF RVDevelopN Citrus clementina cDNA clone C32104D06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921388 ID=FC921388; Name=FC921388; organism=Citrus clementina; type=EST; length=696bp
GAACGAACGCTTCTATTGATATCAGCATTGTCTAAAAGCATGGGATCTAA
AACAGTAGTTTTCTTTCTGGTCTCTCTCGTCGTCGTCTCCGCCGTTTCAT
CAGGGACGTTGATCGACGATGTTGATCAGCTGATCAGGCAAGTAACGGAC
GGCGGTGACGAGATCCTAAGCCACCACGAGAGCACCAACAACGACCTCTT
GGGCGCAGAGCACCACTTCTCCCTATTCAAGAAGAAGTTCAATAAAGCGT
ACGCTTCGCAGGAGGAGCACGACCGTAGGTTCACTATTTTCAAGGCCAAC
TTGCGACGCGCCGCGCGTCGCCAGAAGCTCGACCCGAGCGCCACCCACGG
CGTCACTCAGTTCTCCGACTTGACTCCGGCCGAGTTCCGCCGGACGTACC
TTGGCCTCAGGAGGAAGCTGAGGCTGCCTAAGGATGCGGATCAGGCGCCG
ATCTTGCCTACGAATGATTTGCCGGCGGATTTTGATTGGAGAGAGAAGGG
CGCTGTAGGCCCTGTTAAAGATCAGGGTTCATGCGGATCATGCTGGAGTT
TCAGTACAACAGGGGCCTTGGAAGGTGCTAACTTCCTGGNCACTGGAAAG
CTTGTGAGCCTCAGTGAGCAACAGCTTGTGGATTGCGATCATGAGTGTGA
TCCTGAGGAAACAGGTTCTTGTGATTCTGGGATGCATGGTGGGCTT
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