FC921411

Overview
NameFC921411
Unique NameFC921411
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length685
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921411 vs. ExPASy Swiss-Prot
Match: TCMO_ARATH (Trans-cinnamate 4-monooxygenase OS=Arabidopsis thaliana GN=CYP73A5 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.438e-16
Identity = 48/157 (30.57%), Postives = 84/157 (53.50%), Query Frame = 1
Query:  139 RYRLPPGPYPWPIIGNLLDVKPD-RCRCFAEWSKIYGPIMSVWIGSSLNVIVSNSELAKQVLKDCDQQLANRHRPKAVAIISKGGTDLVWADYGAHYVKVRRVCTLELFSPKRTEALRPIREEEVRAMIASIFKDSTNSSNSLVLRKYLGSVAFTTL 606
            + +LPPGP P PI GN L V  D   R   +++K +G +  + +G    V+VS+ +L K+VL     +  +R R     I +  G D+V+  YG H+ K+RR+ T+  F+ K  +  R   E E  +++  + K+  +++  +VLRK L  + +  +
Sbjct:   30 KLKLPPGPIPIPIFGNWLQVGDDLNHRNLVDYAKKFGDLFLLRMGQRNLVVVSSPDLTKEVLLTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQNREGWEFEAASVVEDVKKNPDSATKGIVLRKRLQLMMYNNM 186          

HSP 2 Score: 24.2534 bits (51), Expect = 3.438e-16
Identity = 8/17 (47.06%), Postives = 15/17 (88.24%), Query Frame = 3
Query:  594 FHNITRLVFGKRFESEE 644
            ++N+ R++F +RFESE+
Sbjct:  183 YNNMFRIMFDRRFESED 199          
BLAST of FC921411 vs. ExPASy Swiss-Prot
Match: C81E1_GLYEC (Isoflavone 2'-hydroxylase OS=Glycyrrhiza echinata GN=CYP81E1 PE=1 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 3.439e-16
Identity = 52/153 (33.99%), Postives = 76/153 (49.67%), Query Frame = 1
Query:  148 LPPGPYPWPIIGNLLDVKPDRCRCFAEWSKIYGPIMSVWIGSSLNVIVSNSELAKQVLKDCDQQLANRHRPKAVAIISKGGTDLVWADYGAHYVKVRRVCTLELFSPKRTEALRPIREEEVRAMIASIFKDSTNSSNSLVLRKYLGSVAFTTL 606
            LPPGP   PIIGNL  +K    R F   S+ YG + S+W GS L V+VS++   +Q     D  LANR R  +   I    T L    YG H+  +RR+  L++ S  R  +   IR +E + +I  +  DS+ +   + L   L  + F  +
Sbjct:   32 LPPGPPSLPIIGNLHHLKRPLHRTFKGLSEKYGHVFSLWFGSRLVVVVSSASEFQQCFTKNDVVLANRPRFLSGKYIFYNYTTLGSTSYGEHWRNLRRITALDVLSNHRINSFSGIRRDETQRLITRLADDSSTNFAEMELSSRLYDMTFNNI 184          

HSP 2 Score: 23.0978 bits (48), Expect = 3.439e-16
Identity = 8/17 (47.06%), Postives = 13/17 (76.47%), Query Frame = 3
Query:  594 FHNITRLVFGKRFESEE 644
            F+NI R++ GKR+  E+
Sbjct:  181 FNNIMRMISGKRYYGED 197          
BLAST of FC921411 vs. ExPASy Swiss-Prot
Match: C71DA_SOYBN (Cytochrome P450 71D10 OS=Glycine max GN=CYP71D10 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.899e-16
Identity = 43/142 (30.28%), Postives = 83/142 (58.45%), Query Frame = 1
Query:  145 RLPPGPYPWPIIGNLLDVKPDRCRCF--AEWSKIYGPIMSVWIGSSLNVIVSNSELAKQVLKDCDQQLANRHRPKAVAIISKGGTDLVWADYGAHYVKVRRVCTLELFSPKRTEALRPIREEEVRAMIASIFKDSTNSSNSL 564
            +LPPGP   P+IGN+  +       +     +  YGP+M + +G   N+IV++ E+A++++K  D   ++R       I+S  G+ +V++ +G ++ ++R++CT+EL + KR ++ R IREEEV  ++  I   ++    S+
Sbjct:   42 KLPPGPRTLPLIGNIHQIVGSLPVHYYLKNLADKYGPLMHLKLGEVSNIIVTSPEMAQEIMKTHDLNFSDRPDFVLSRIVSYNGSGIVFSQHGDYWRQLRKICTVELLTAKRVQSFRSIREEEVAELVKKIAATASEEGGSI 183          
BLAST of FC921411 vs. ExPASy Swiss-Prot
Match: C71BX_ARATH (Cytochrome P450 71B36 OS=Arabidopsis thaliana GN=CYP71B36 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.899e-16
Identity = 48/137 (35.04%), Postives = 78/137 (56.93%), Query Frame = 1
Query:  145 RLPPGPYPWPIIGNLLDVKPDRCRCFAEWSKIYGPIMSVWIGSSLNVIVSNSELAKQVLKDCDQQLANRHRPKAVAIISKGGTDLVWADYGAHYVKVRRVCTLELFSPKRTEALRPIREEEVRAMIASIFKDSTNSS 555
            R PP P  +PIIGNL  +     +     SK YG +M +  GS   V+VS+SE AKQVLK  D    +R        +S    D+ ++ +  ++ ++RR+C  ELFS KR ++ +PI+E+EV+ +I S+ + ++  +
Sbjct:   30 RKPPSPPGFPIIGNLHQLGELPHQSLWRLSKKYGHVMLLKFGSIPTVVVSSSETAKQVLKIHDLHCCSRPSLAGPRALSYNYLDIAFSPFDDYWKELRRICVQELFSVKRVQSFQPIKEDEVKKLIDSVSESASQGT 166          
BLAST of FC921411 vs. ExPASy Swiss-Prot
Match: C71A1_PERAE (Cytochrome P450 71A1 OS=Persea americana GN=CYP71A1 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 5.816e-16
Identity = 52/146 (35.62%), Postives = 79/146 (54.11%), Query Frame = 1
Query:  148 LPPGPYPWPIIGNLLDVKPDRCRCFAEWSKIYGPIMSVWIGSSLNVIVSNSELAKQVLKDCDQQLANRHRPKAVAIISKGGTDLVWADYGAHYVKVRRVCTLELFSPKRTEALRPIREEEVRAMIASIFK-----DSTNSSNSLVL 570
            LPP P   PIIGNL  +     R     +   GP++ + +G    +IVS +E+A+++LK  D   A+R    A   I    TD+ ++ YG ++ +VR++C LEL S KR  + R IREEEV  M+  I +     ++ N S  L+L
Sbjct:   31 LPPSPPNLPIIGNLHQLGNLPHRSLRSLANELGPLILLHLGHIPTLIVSTAEIAEEILKTHDLIFASRPSTTAARRIFYDCTDVAFSPYGEYWRQVRKICVLELLSIKRVNSYRSIREEEVGLMMERISQSCSTGEAVNLSELLLL 176          

HSP 2 Score: 24.6386 bits (52), Expect = 5.816e-16
Identity = 9/14 (64.29%), Postives = 12/14 (85.71%), Query Frame = 3
Query:  603 ITRLVFGKRFESEE 644
            ITR+ FGK++E EE
Sbjct:  182 ITRVAFGKKYEGEE 195          
BLAST of FC921411 vs. ExPASy Swiss-Prot
Match: C71BW_ARATH (Cytochrome P450 71B35 OS=Arabidopsis thaliana GN=CYP71B35 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.399e-16
Identity = 47/139 (33.81%), Postives = 80/139 (57.55%), Query Frame = 1
Query:  139 RYRLPPGPYPWPIIGNLLDVKPDRCRCFAEWSKIYGPIMSVWIGSSLNVIVSNSELAKQVLKDCDQQLANRHRPKAVAIISKGGTDLVWADYGAHYVKVRRVCTLELFSPKRTEALRPIREEEVRAMIASIFKDSTNSS 555
            +YR  P P  +PIIGNL  +     +   + SK YGP+M + +G    V+VS+S+ A+QVL+  D     R        +S    D+ ++ Y  ++ +VR++C  ELFS K+  +++PI++EEV+ MI SI + ++  +
Sbjct:   27 KYRQFPCPPGFPIIGNLHQIGELPHQTLWKLSKKYGPVMHLMLGRVPTVVVSSSDTARQVLRVHDLHCCTRPSLSGPRELSYNYLDIAFSPYDDYWKEVRKLCVQELFSTKQVHSIQPIKDEEVKKMIDSIAESASQKN 165          
BLAST of FC921411 vs. ExPASy Swiss-Prot
Match: C76C2_ARATH (Cytochrome P450 76C2 OS=Arabidopsis thaliana GN=CYP76C2 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.357e-16
Identity = 47/132 (35.61%), Postives = 79/132 (59.85%), Query Frame = 1
Query:  151 PPGPYPWPIIGNLLDVKPDRCRCFAEWSKIYGPIMSVWIGSSLNVIVSNSELAKQVLKDCDQQLANRHRPKAVAIISKGGTDLVW-ADYGAHYVKVRRVCTLELFSPKRTEALRPIREEEVRAMIASIFKDS 543
            PPGP   PIIGN+  V  +    FA+ SK YGPIMS+  GS   V+V++ E A++VL+  DQ L++R    ++  I+     +VW     + +  +R++   +LFSP+R EA + +RE +V+ +++ + + S
Sbjct:   39 PPGPPRLPIIGNIHLVGRNPHHSFADLSKTYGPIMSLKFGSLNTVVVTSPEAAREVLRTYDQILSSRTPTNSIRSINHDKVSVVWLPPSSSRWRLLRKLSATQLFSPQRIEATKTLRENKVKELVSFMSESS 170          
BLAST of FC921411 vs. ExPASy Swiss-Prot
Match: C71D6_SOLCH (Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71D6 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.357e-16
Identity = 52/159 (32.70%), Postives = 89/159 (55.97%), Query Frame = 1
Query:  115 VYRLYPWLRY-------RLPPGPYPWPIIGNLLDVKPDRC-RCFAEWSKIYGPIMSVWIGSSLNVIVSNSELAKQVLKDCDQQLANRHRPKAVAIISKGGTDLVWADYGAHYVKVRRVCTLELFSPKRTEALRPIREEEVRAMIASIFKDSTNSSNSLV 567
            ++ L  W +Y       +LPPGP+  P IG++  +   R  R   + +K YGP+M + +G    V+V++ ++AK+VLK  D   A+R +  A+ II     D+ ++ YG ++ ++R++C  E+ S K   +   IR +EV  +I SI   S++SS  LV
Sbjct:   13 LFLLRKWKKYSKNSQTKKLPPGPWKLPFIGSMHHLAGGRPHRVLRDLAKKYGPLMHLQLGEVSAVVVTSPDMAKEVLKTHDIAFASRPKLLAMDIICYDRCDIAFSPYGEYWKQMRKICVTEVLSAKSVRSFSSIRCDEVVRLIDSI--QSSSSSGELV 169          
BLAST of FC921411 vs. ExPASy Swiss-Prot
Match: C71B8_ARATH (Cytochrome P450 71B8 OS=Arabidopsis thaliana GN=CYP71B8 PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.091e-15
Identity = 47/135 (34.81%), Postives = 78/135 (57.78%), Query Frame = 1
Query:  139 RYRLPPGPYPWPIIGNLLDVKPDRCRCFAEWSKIYGPIMSVWIGSSLNVIVSNSELAKQVLKDCDQQLANRHRPKAVAIISKGGTDLVWADYGAHYVKVRRVCTLELFSPKRTEALRPIREEEVRAMIASIFKDS 543
            +++LPPGP   PIIGNL  +       F + S  +GP+M +  G    V++S+ E AKQVLK  D +  +R +  A  + ++   D+ +A YG  + +++++  LELF+PK+ +  R IREEE   ++  + K S
Sbjct:   27 KWKLPPGPTGLPIIGNLHQLGRLLHSSFHKLSLEHGPVMLLRFGVVPMVVISSKEAAKQVLKSRDLETCSRPKLVANGLFTRNFKDIAFAQYGEDWREMKKLVGLELFNPKKHKFFRYIREEEGDLLVKKLSKSS 161          
BLAST of FC921411 vs. ExPASy Swiss-Prot
Match: TCMO_PEA (Trans-cinnamate 4-monooxygenase OS=Pisum sativum GN=CYP73A9 PE=2 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 1.275e-15
Identity = 48/148 (32.43%), Postives = 81/148 (54.73%), Query Frame = 1
Query:  142 YRLPPGPYPWPIIGNLLDVKPD-RCRCFAEWSKIYGPIMSVWIGSSLNVIVSNSELAKQVLKDCDQQLANRHRPKAVAIISKGGTDLVWADYGAHYVKVRRVCTLELFSPKRTEALRPIREEEVRAMIASIFKDSTNSSNSLVLRKYL 582
            ++LPPGP+P P+ GN L V  D   R   + +K +  I+ + +     V++S+ ELAK+VL     +  +R R     I +  G D+V+  YG H+ K+RR+ T+  F+ K  +  R   E E  +++  + K+S  S N +V+R+ L
Sbjct:   31 FKLPPGPFPVPVFGNWLQVGDDLNHRNLTDLAKRFAEILLLRMEQRNLVVISSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDIVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRFGWESEAASVVDDVKKNSKASVNGIVIRRRL 178          

HSP 2 Score: 21.9422 bits (45), Expect = 1.275e-15
Identity = 8/12 (66.67%), Postives = 11/12 (91.67%), Query Frame = 3
Query:  609 RLVFGKRFESEE 644
            R++F +RFESEE
Sbjct:  188 RIMFDRRFESEE 199          
The following BLAST results are available for this feature:
BLAST of FC921411 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 114
Match NameE-valueIdentityDescription
TCMO_ARATH3.438e-1630.57Trans-cinnamate 4-monooxygenase OS=Arabidopsis tha... [more]
C81E1_GLYEC3.439e-1633.99Isoflavone 2'-hydroxylase OS=Glycyrrhiza echinata ... [more]
C71DA_SOYBN4.899e-1630.28Cytochrome P450 71D10 OS=Glycine max GN=CYP71D10 P... [more]
C71BX_ARATH4.899e-1635.04Cytochrome P450 71B36 OS=Arabidopsis thaliana GN=C... [more]
C71A1_PERAE5.816e-1635.62Cytochrome P450 71A1 OS=Persea americana GN=CYP71A... [more]
C71BW_ARATH6.399e-1633.81Cytochrome P450 71B35 OS=Arabidopsis thaliana GN=C... [more]
C76C2_ARATH8.357e-1635.61Cytochrome P450 76C2 OS=Arabidopsis thaliana GN=CY... [more]
C71D6_SOLCH8.357e-1632.70Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71... [more]
C71B8_ARATH1.091e-1534.81Cytochrome P450 71B8 OS=Arabidopsis thaliana GN=CY... [more]
TCMO_PEA1.275e-1532.43Trans-cinnamate 4-monooxygenase OS=Pisum sativum G... [more]

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Properties
Property NameValue
Genbank descriptionC32104F09EF RVDevelopN Citrus clementina cDNA clone C32104F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921411 ID=FC921411; Name=FC921411; organism=Citrus clementina; type=EST; length=685bp
GAATGCAACCTATAAAGTTTACGGATGCAATCACATTATAATTCACCTAT
AATTTAATTTCTTTAAATGGAACTCTTTCTCTTTATCATATCGATCATCA
TCTTCATCTTATTCGTTTACAGGCTGTATCCATGGCTGAGATACAGGCTC
CCACCAGGTCCATATCCATGGCCAATCATAGGAAACCTGTTGGATGTAAA
ACCAGACAGATGCCGGTGTTTTGCTGAGTGGTCAAAGATTTACGGTCCAA
TCATGTCCGTATGGATAGGCTCATCATTGAATGTTATAGTGTCAAATTCA
GAACTGGCCAAGCAAGTGCTCAAAGACTGTGACCAGCAGTTAGCCAATAG
GCACCGACCCAAGGCAGTGGCTATCATTTCCAAAGGTGGTACAGATCTTG
TATGGGCCGATTATGGGGCCCACTATGTTAAGGTGCGAAGAGTATGCACC
CTTGAACTCTTCTCCCCAAAAAGGACGGAGGCCCTTAGGCCCATTAGAGA
AGAGGAAGTTAGAGCCATGATTGCTTCTATTTTCAAAGACTCCACCAATA
GCAGTAACAGTTTGGTTCTGAGGAAGTATTTGGGTTCCGTGGCTTTCACA
ACATTACAAGACTAGTGTTTGGGAAGAGATTTGAGAGCGAAGAAGGGTAG
TGGATGGCCAGGACTGGAATTCAGGCAATTGTGCT
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