FC921411

Overview
NameFC921411
Unique NameFC921411
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length685
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921411 vs. ExPASy Swiss-Prot
Match: TCMO_PETCR (Trans-cinnamate 4-monooxygenase OS=Petroselinum crispum GN=CYP73A10 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.058e-14
Identity = 47/157 (29.94%), Postives = 81/157 (51.59%), Query Frame = 1
Query:  139 RYRLPPGPYPWPIIGNLLDVKPD-RCRCFAEWSKIYGPIMSVWIGSSLNVIVSNSELAKQVLKDCDQQLANRHRPKAVAIISKGGTDLVWADYGAHYVKVRRVCTLELFSPKRTEALRPIREEEVRAMIASIFKDSTNSSNSLVLRKYLGSVAFTTL 606
            + +LPPGP P P+ GN L V  D   R   +++K +G +  + +G    V+VS+ ELAK VL     +  +R R     I +  G D+V+  Y  H+ K+RR+ T+  F+ K  +  R   E+E   ++  +  +   ++N +VLR  L  + +  +
Sbjct:   31 KLKLPPGPIPVPVFGNWLQVGDDLNQRNLVDYAKKFGDLFMLRMGQRNLVVVSSPELAKDVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYSEHWRKMRRIMTVPFFTNKVVQQYRFGWEDEAARVVEDVKANPEAATNGIVLRNRLQLLMYNNM 187          
BLAST of FC921411 vs. ExPASy Swiss-Prot
Match: C71BD_ARATH (Cytochrome P450 71B13 OS=Arabidopsis thaliana GN=CYP71B13 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.058e-14
Identity = 54/153 (35.29%), Postives = 81/153 (52.94%), Query Frame = 1
Query:  148 LPPGPYPWPIIGNLLDVKPDRCRCFAEWSKIYGPIMSVWIGSSLNVIVSNSELAKQVLKDCDQQLANRHRPKAVAIISKGGTDLVWADYGAHYVKVRRVCTLELFSPKRTEALRPIREEEVRAMIASI-----FKDSTNSSNSLVLRKYLGSV 591
            LPPGP   PIIGNL  +     R   + S+ YGP++ + +G   +V+ S  E  K VLK  D+   +R      A IS    DL +A Y  ++  VR++  +EL++ KR ++ R IREEEV + +  I      ++  N + +LV  K  GSV
Sbjct:   29 LPPGPPRLPIIGNLHQLGSKPHRSMFKLSEKYGPLVYLKLGKVPSVVASTPETVKDVLKTFDKDCCSRAFLTYPARISYNLKDLAFAPYSKYWKAVRKMTVVELYTAKRVKSFRNIREEEVASFVEFIKHSASLEEIVNLNQTLV--KLSGSV 179          
BLAST of FC921411 vs. ExPASy Swiss-Prot
Match: C71AQ_ARATH (Cytochrome P450 71A26 OS=Arabidopsis thaliana GN=CYP71A26 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.688e-14
Identity = 54/158 (34.18%), Postives = 79/158 (50.00%), Query Frame = 1
Query:  154 PGPYPWPIIGNLLDVKPDRCRCFAEWSKIYGPIMSVWIGSSLNVIVSNSELAKQVLKDCDQQLANRHRPKAVAIISKGGTDLVWADYGAHYVKVRRVCTLELFSPKRTEALRPIREEEVRAMIASIFKDSTNSSNSLVLRKYLGSVAFTTLQD*CLGR 627
            P P   P+IGNL  +     R     S  YGP+M +  G    ++VS++ELA+ VLK  D+  A+R R K    +     D+  A YG ++ +++ VC L LFS K   + R +REEE+  M+  I K  +   N   L K L S+    +    LGR
Sbjct:   33 PSPPGLPLIGNLHQLGRHPHRSLCSLSHRYGPLMLLHFGRVPVLVVSSAELARDVLKTHDRVFASRPRSKIFEKLLYDKHDVASAPYGEYWRQMKSVCVLHLFSNKMVRSFREVREEEISLMMEKIRKSISLPVN---LSKILVSLTNDVICKVALGR 187          
BLAST of FC921411 vs. ExPASy Swiss-Prot
Match: C71AM_ARATH (Cytochrome P450 71A22 OS=Arabidopsis thaliana GN=CYP71A22 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.586e-14
Identity = 50/159 (31.45%), Postives = 80/159 (50.31%), Query Frame = 1
Query:  151 PPGPYPWPIIGNLLDVKPDRCRCFAEWSKIYGPIMSVWIGSSLNVIVSNSELAKQVLKDCDQQLANRHRPKAVAIISKGGTDLVWADYGAHYVKVRRVCTLELFSPKRTEALRPIREEEVRAMIASIFKDSTNSSNSLVLRKYLGSVAFTTLQD*CLGR 627
            P  P   P+IGNL  +     R     S  YGP+M +  G    ++VS++++A+ +LK  D+  A+R R K    I     D+  A YG ++ +++ VC L L + K   + R +R+EE+  M+  I K S+   N   L + LGS+    +    LGR
Sbjct:   33 PASPPRLPLIGNLHQLGRHPHRSLCSLSNRYGPLMLLRFGLVPVLVVSSADVARDILKTYDRVFASRPRSKIFEKIFYEARDVALAPYGEYWRQMKSVCVLHLLTNKMVRSFRNVRQEEISLMMEKIQKSSSLQVN---LSELLGSLTNDVISRVALGR 188          
BLAST of FC921411 vs. ExPASy Swiss-Prot
Match: C99A2_ORYSJ (Cytochrome P450 99A2 OS=Oryza sativa subsp. japonica GN=CYP99A2 PE=2 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 5.989e-14
Identity = 43/130 (33.08%), Postives = 71/130 (54.62%), Query Frame = 1
Query:  145 RLPPGPYPWPIIGNLLDVKPDRCR-CFAEWSKIYGPIMSVWIGSSLNVIVSNSELAKQVLKDCDQQLANRHRPKAVAIISKGGTDLVWADYGAHYVKVRRVCTLELFSPKRTEALRPIREEEVRAMIASI 531
            R PPGP+  P++G LL +     +    E +  YGP+M + +G    V+VS+   A++VL+D D   A+R       I      D+ +A YGA++  +R++CT+EL S K    L P+R +E   ++ +I
Sbjct:   58 RRPPGPWNLPLVGGLLHLLRSHPQVALRELASKYGPVMFLRMGQIDTVVVSSPAAAQEVLRDKDVMFASRPSLLVSEIFCYDNLDVGFAPYGAYWRMLRKLCTVELLSTKVVRQLAPVRNDETLTLVRNI 187          
BLAST of FC921411 vs. ExPASy Swiss-Prot
Match: C76A2_SOLME (Cytochrome P450 76A2 OS=Solanum melongena GN=CYP76A2 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.989e-14
Identity = 46/166 (27.71%), Postives = 85/166 (51.20%), Query Frame = 1
Query:  142 YRLPPGPYPWPIIGNLLDVKPDRCRCFAEWSKIYGPIMSVWIGSSLNVIVSNSELAKQVLKDCDQQLANRHRPKAVAIISKGGTDLVWADYGAHYVKVRRVCTLELFSPKRTEALRPIREEEVRAMIASIFKD--STNSSNSLVLRKYLGSVAFTTLQD*CLGRDL 633
            Y+ PPGP   PI GN+ ++  +  +  A   + YGP++ + +GS+  ++V  ++ ++++ K+ D   ANR  P      S     L  A YG  +   RR+CT+E+F  K+     P+R + V  M+  I K+  S    + + + +++   +F  L +  L +DL
Sbjct:   33 YKFPPGPPGLPIFGNMFELGTEPYKKMAVLRQKYGPVLWLKLGSTYTMVVQTAQASEELFKNHDISFANRVIPDVNQAHSYYQGSLAIAPYGPFWRFQRRICTIEMFVHKKISETEPVRRKCVDNMLKWIEKEANSAEKGSGIEVTRFVFLASFNMLGNLILSKDL 198          
BLAST of FC921411 vs. ExPASy Swiss-Prot
Match: C71BU_ARATH (Cytochrome P450 71B31 OS=Arabidopsis thaliana GN=CYP71B31 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.989e-14
Identity = 53/166 (31.93%), Postives = 86/166 (51.81%), Query Frame = 1
Query:  139 RYRLPPGPYPWPIIGNLLDVKPDRCRCFAEWSKIYGPIMSVWIGSSLNVIVSNSELAKQVLKDCDQQLANRHRPKAVAIISKGGTDLVWADYGAHYVKVRRVCTLELFSPKRTEALRPIREEEVRAMIASIFKDSTNSSNSLVLRKYLGSVAFTTLQD*CLGRDLR 636
            R +LPPGP   P+IGNL  +         + S  +GP+M V  G     + S++E AK+VLK  D +  NR +  A  + + G  D+ +  YG  + ++++   LELFSPK+ ++ R IREEE   ++  I  +   +   + LRK L S   + +     G++ R
Sbjct:   25 RKKLPPGPTGLPLIGNLHQLGRLLHSSLHKLSLEHGPVMLVRWGVVPMAVFSSNEAAKEVLKTHDLETCNRPKLVANGLFTHGYKDIGFTQYGEEWREMKKFVGLELFSPKKHKSFRYIREEEGDLLVKKI-SNYAQTQTLVDLRKSLFSYTASIIFREAFGQNFR 189          
BLAST of FC921411 vs. ExPASy Swiss-Prot
Match: C71E1_SORBI (4-hydroxyphenylacetaldehyde oxime monooxygenase OS=Sorghum bicolor GN=CYP71E1 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 7.822e-14
Identity = 51/159 (32.08%), Postives = 89/159 (55.97%), Query Frame = 1
Query:  145 RLPPGPYPWPIIGNLLDVKPDRCRCFAEWSKIYGPIMSVWIGSSLNVIVSNSELAKQVLKDCDQQLANRHRPKAVAIISKGGTDLVWADYGAHYVKVRRVCTLELFSPKRTEALRPIREEEVRAMIASIFKDSTNSSNSLVLRKY--------LGSVAF 597
            RLPPGP   PI+GNL  + P   +   E ++ YGP+M + +G+   V+VS++E A++VLK  D    +R        +S    ++ +A YG ++ ++R++  LEL S +R +A    RE+E+  ++A + + +  S  S+VL  +        +G+VAF
Sbjct:   54 RLPPGPAQLPILGNLHLLGPLPHKNLRELARRYGPVMQLRLGTVPTVVVSSAEAAREVLKVHDVDCCSRPASPGPKRLSYDLKNVGFAPYGEYWREMRKLFALELLSMRRVKAACYAREQEMDRLVADLDR-AAASKASIVLNDHVFALTDGIIGTVAF 211          
BLAST of FC921411 vs. ExPASy Swiss-Prot
Match: C71A4_SOLME (Cytochrome P450 71A4 OS=Solanum melongena GN=CYP71A4 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.022e-13
Identity = 43/128 (33.59%), Postives = 68/128 (53.12%), Query Frame = 1
Query:  148 LPPGPYPWPIIGNLLDVKPDRCRCFAEWSKIYGPIMSVWIGSSLNVIVSNSELAKQVLKDCDQQLANRHRPKAVAIISKGGTDLVWADYGAHYVKVRRVCTLELFSPKRTEALRPIREEEVRAMIASI 531
            LPP P   PIIGNL  +     R   + S+ YGP+M + +GS   ++ S+ + A+ +LK  D   A R +      +  G  D+ ++ +G ++ +VR +  L L S KR ++ R +REEE   MI  I
Sbjct:   36 LPPSPRKLPIIGNLHQLGSHPHRSLRKLSQKYGPVMLLHLGSKPVIVASSVDAARDILKTHDHVWATRPKYSIADSLLYGSKDVGFSPFGEYWWQVRSIVVLHLLSNKRVQSYRDVREEETANMIEKI 163          
BLAST of FC921411 vs. ExPASy Swiss-Prot
Match: TCMO_CICAR (Trans-cinnamate 4-monooxygenase OS=Cicer arietinum GN=CYP73A19 PE=2 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 1.092e-13
Identity = 49/149 (32.89%), Postives = 80/149 (53.69%), Query Frame = 1
Query:  139 RYRLPPGPYPWPIIGNLLDVKPD-RCRCFAEWSKIYGPIMSVWIGSSLNVIVSNSELAKQVLKDCDQQLANRHRPKAVAIISKGGTDLVWADYGAHYVKVRRVCTLELFSPKRTEALRPIREEEVRAMIASIFKDSTNSSNSLVLRKYL 582
            R++LPPGP P P+ GN L V  D   R   + +K +G I  + +G    V+VS+ ELAK+VL     +  +R R     I +  G D+V+  YG    ++RR+ T+  F+ K  +  R   E E ++++  + K+    S+ +VLR+ L
Sbjct:   30 RFKLPPGPIPVPVFGNWLQVGDDLNHRNLTDLAKRFGDIFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGT-LAEMRRIMTVPFFTNKVVQQYRFGWEFEAQSVVDDVKKNPEACSSGIVLRRRL 177          

HSP 2 Score: 21.9422 bits (45), Expect = 1.092e-13
Identity = 8/12 (66.67%), Postives = 11/12 (91.67%), Query Frame = 3
Query:  609 RLVFGKRFESEE 644
            R++F +RFESEE
Sbjct:  187 RIMFDRRFESEE 198          
The following BLAST results are available for this feature:
BLAST of FC921411 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 114
Match NameE-valueIdentityDescription
TCMO_PETCR2.058e-1429.94Trans-cinnamate 4-monooxygenase OS=Petroselinum cr... [more]
C71BD_ARATH2.058e-1435.29Cytochrome P450 71B13 OS=Arabidopsis thaliana GN=C... [more]
C71AQ_ARATH2.688e-1434.18Cytochrome P450 71A26 OS=Arabidopsis thaliana GN=C... [more]
C71AM_ARATH4.586e-1431.45Cytochrome P450 71A22 OS=Arabidopsis thaliana GN=C... [more]
C99A2_ORYSJ5.989e-1433.08Cytochrome P450 99A2 OS=Oryza sativa subsp. japoni... [more]
C76A2_SOLME5.989e-1427.71Cytochrome P450 76A2 OS=Solanum melongena GN=CYP76... [more]
C71BU_ARATH5.989e-1431.93Cytochrome P450 71B31 OS=Arabidopsis thaliana GN=C... [more]
C71E1_SORBI7.822e-1432.084-hydroxyphenylacetaldehyde oxime monooxygenase OS... [more]
C71A4_SOLME1.022e-1333.59Cytochrome P450 71A4 OS=Solanum melongena GN=CYP71... [more]
TCMO_CICAR1.092e-1332.89Trans-cinnamate 4-monooxygenase OS=Cicer arietinum... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC32104F09EF RVDevelopN Citrus clementina cDNA clone C32104F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921411 ID=FC921411; Name=FC921411; organism=Citrus clementina; type=EST; length=685bp
GAATGCAACCTATAAAGTTTACGGATGCAATCACATTATAATTCACCTAT
AATTTAATTTCTTTAAATGGAACTCTTTCTCTTTATCATATCGATCATCA
TCTTCATCTTATTCGTTTACAGGCTGTATCCATGGCTGAGATACAGGCTC
CCACCAGGTCCATATCCATGGCCAATCATAGGAAACCTGTTGGATGTAAA
ACCAGACAGATGCCGGTGTTTTGCTGAGTGGTCAAAGATTTACGGTCCAA
TCATGTCCGTATGGATAGGCTCATCATTGAATGTTATAGTGTCAAATTCA
GAACTGGCCAAGCAAGTGCTCAAAGACTGTGACCAGCAGTTAGCCAATAG
GCACCGACCCAAGGCAGTGGCTATCATTTCCAAAGGTGGTACAGATCTTG
TATGGGCCGATTATGGGGCCCACTATGTTAAGGTGCGAAGAGTATGCACC
CTTGAACTCTTCTCCCCAAAAAGGACGGAGGCCCTTAGGCCCATTAGAGA
AGAGGAAGTTAGAGCCATGATTGCTTCTATTTTCAAAGACTCCACCAATA
GCAGTAACAGTTTGGTTCTGAGGAAGTATTTGGGTTCCGTGGCTTTCACA
ACATTACAAGACTAGTGTTTGGGAAGAGATTTGAGAGCGAAGAAGGGTAG
TGGATGGCCAGGACTGGAATTCAGGCAATTGTGCT
back to top