FC921422

Overview
NameFC921422
Unique NameFC921422
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length701
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921422 vs. ExPASy Swiss-Prot
Match: PER3_ARMRU (Peroxidase C3 OS=Armoracia rusticana GN=PRXC3 PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 5.613e-39
Identity = 89/209 (42.58%), Postives = 125/209 (59.81%), Query Frame = 1
Query:   76 GSLLLVCLVVFGIIGVCQGGELRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNL-SLGGFEVINEIKSELESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLT-VKDLVVLSGGHTIGVSHCTFFSNRLYNF 696
            G+L+L CL+   +       +LR +FY  +C S  +I+  I      ++P + A L+R+HFHDCFVRGCDAS+L++++   + E+DA PN  S  GF VI+ +K+ LE  CP  VSCAD++ +A++  +S        W V  GRRD   +    A+  LPSPF   ++LKK F D GL    DLV LSGGHT G + C F + RLYNF
Sbjct:   13 GALILSCLL---LQASNSNAQLRPDFYFRTCPSVFNIIGDIIVDELRTDPRIAASLLRLHFHDCFVRGCDASILLDNSTSFRTEKDAAPNANSARGFGVIDRMKTSLERACPRTVSCADVLTIASQ--ISVLLSGGPWWPVPLGRRDSVEAFFDLANTALPSPFFTLAQLKKAFADVGLNRPSDLVALSGGHTFGRAQCQFVTPRLYNF 216          
BLAST of FC921422 vs. ExPASy Swiss-Prot
Match: PER2_MAIZE (Peroxidase 2 OS=Zea mays GN=PER2 PE=2 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 5.613e-39
Identity = 98/217 (45.16%), Postives = 133/217 (61.29%), Query Frame = 1
Query:   55 MKKAAGAGSLLLVCLVVFGIIGVCQGGE---LRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKA-ERDAVPNL-SLGGFEVINEIKSELESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHC-TFFSNRL 687
            M  +  A +LLL+          CQ      L   +YR +C  AE IV++   K  A NP   A +IRM FHDCFV GCDASVL++ T  +   E+ A PN  SL GFE+I+ IK  LE+ CPG+VSCADI+A A RD+  F  Q    +++ +GR DG+ S A+E+   L  P +N S+L  +F  KG++++DLVVLSG HT+G SHC +F S+RL
Sbjct:   10 MPSSVFAAALLLLAAAA------CQASPYYPLELGYYRYTCPQAEAIVKASMEKAIAQNPGNGAAVIRMLFHDCFVEGCDASVLLDPTPFSPTPEKLAAPNNPSLRGFELIDAIKDALEAACPGVVSCADIIAFAARDASCFLSQGKVSFDMPSGRLDGTFSNASESVKFLVPPTSNLSDLASSFAVKGMSLEDLVVLSGAHTVGRSHCSSFVSDRL 220          
BLAST of FC921422 vs. ExPASy Swiss-Prot
Match: PER20_ARATH (Peroxidase 20 OS=Arabidopsis thaliana GN=PER20 PE=2 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 5.613e-39
Identity = 90/204 (44.12%), Postives = 125/204 (61.27%), Query Frame = 1
Query:   79 SLLLVCLVVFGIIGVCQGGELRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNL-SLGGFEVINEIKSELESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRL 687
            SL+++  +   ++G   G  L K FY++SC  AE+IV+         +P + A L+R+ FHDCFV GCDASVL+++     +E+ A PNL SL GFEVI+ IK  LE  CP  VSC+DI+ALA RDSV    +    WEVL GRRD   +  A A+  +P+P ++   L  NF  +GL ++DL+ LSG HTIG + C  F  R+
Sbjct:   11 SLIVLYAITTSVLGDF-GEPLLKGFYKESCPLAEEIVKHNIEVAVLKDPRMAASLLRLQFHDCFVLGCDASVLLDTHGDMLSEKQATPNLNSLRGFEVIDYIKYLLEEACPLTVSCSDILALAARDSVF--LRGGPWWEVLLGRRDSLKASFAGANQFIPAPNSSLDSLIINFKQQGLNIQDLIALSGAHTIGKARCVSFKQRI 211          
BLAST of FC921422 vs. ExPASy Swiss-Prot
Match: PER14_ARATH (Peroxidase 14 OS=Arabidopsis thaliana GN=PER14 PE=2 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 5.613e-39
Identity = 94/219 (42.92%), Postives = 130/219 (59.36%), Query Frame = 1
Query:   67 AGAGSLLLVCLVVFGI-IGVCQ-----GGELRK---NFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPN-LSLGGFEVINEIKSELESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYN 693
            A  GS L++  + + + + +C      GG  R    +FYR SC  AE+IVRS+  K       + A L+R+HFHDCFV+GCD S+L++++     E+++ PN  S  GFEV++EIK+ LE+ CP  VSCAD + LA RDS S     P  W V  GRRD + +  A+ +  LP P   F  +   F+++GL + DLV LSG HTIG S CT F  RLYN
Sbjct:    2 ARIGSFLILLSLTYALTLCICDNASNFGGNKRNLFPDFYRSSCPRAEEIVRSVVAKAFERETRMAASLMRLHFHDCFVQGCDGSLLLDTSGSIVTEKNSNPNSRSARGFEVVDEIKAALENECPNTVSCADALTLAARDS-SVLTGGPS-WTVPLGRRDSATASRAKPNKDLPEPDNLFDTIFLRFSNEGLNLTDLVALSGSHTIGFSRCTSFRQRLYN 218          
BLAST of FC921422 vs. ExPASy Swiss-Prot
Match: PERE5_ARMRU (Peroxidase E5 OS=Armoracia rusticana GN=HRPE5 PE=1 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 9.575e-39
Identity = 83/189 (43.92%), Postives = 119/189 (62.96%), Query Frame = 1
Query:  136 ELRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNL-SLGGFEVINEIKSELESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLT-VKDLVVLSGGHTIGVSHCTFFSNRLYNF 696
            +LR +FY  +C S  +I++++      ++P + A ++R+HFHDCFVRGCDAS+L++++   + E+DA PN+ S  GF VI+ +K+ LE  CP  VSCADI+ +A++  +S        W V  GRRD   +    A+  LPSPF   ++LKK F D GL    DLV LSGGHT G + C F + RLYNF
Sbjct:    1 QLRPDFYSRTCPSVFNIIKNVIVDELQTDPRIAASILRLHFHDCFVRGCDASILLDTSKSFRTEKDAAPNVNSARGFNVIDRMKTALERACPRTVSCADILTIASQ--ISVLLSGGPSWAVPLGRRDSVEAFFDLANTALPSPFFTLAQLKKAFADVGLNRPSDLVALSGGHTFGRARCLFVTARLYNF 187          
BLAST of FC921422 vs. ExPASy Swiss-Prot
Match: PER66_MAIZE (Peroxidase 66 OS=Zea mays GN=PER66 PE=1 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 9.575e-39
Identity = 90/202 (44.55%), Postives = 120/202 (59.41%), Query Frame = 1
Query:  100 VVFGIIGVCQGGELRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNLSLG--GFEVINEIKSELESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFT 699
            VV   +      +L   FY  SC +A   +RS         P + A L+R+HFHDCFVRGCDAS+L+N T+G   E+   PNL+L   GF V+N IK+++ES CPGIVSCADI+A+A RD V      P  W VL GRRD + S A +    LP P ++  +L   +N K L   D+V LSG HTIG + C+ F++ +YN T
Sbjct:   18 VVLVALASAASAQLSSTFYDRSCPNALSTIRSGVNSAVRQEPRVGASLLRLHFHDCFVRGCDASLLLNDTSG---EQSQGPNLTLNPRGFVVVNSIKAQVESVCPGIVSCADILAVAARDGV-VALGGPS-WTVLLGRRDSTASFAGQTS-DLPPPTSSLGQLLSAYNKKNLNPTDMVALSGAHTIGQAQCSSFNDHIYNDT 213          
BLAST of FC921422 vs. ExPASy Swiss-Prot
Match: PER54_ARATH (Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.250e-38
Identity = 88/207 (42.51%), Postives = 122/207 (58.94%), Query Frame = 1
Query:   79 SLLLVCLVVFGIIGVCQGGELRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNL-SLGGFEVINEIKSELESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNF 696
            SL+++   +FG        +L   FY  +C +A  IVRS   +   S+  +   LIR+HFHDCFV GCD S+L++ T+  ++E++A  N  S  GF V++ IK+ LE+ CPGIVSC+DI+ALA+  SVS        W VL GRRDG  +  + A+  LPSPF   + +   F   GL   D+V LSG HT G   C  F+NRL+NF
Sbjct:   17 SLIVIVSSLFGT----SSAQLNATFYSGTCPNASAIVRSTIQQALQSDARIGGSLIRLHFHDCFVNGCDGSLLLDDTSSIQSEKNAPANANSTRGFNVVDSIKTALENACPGIVSCSDILALASEASVS--LAGGPSWTVLLGRRDGLTANLSGANSSLPSPFEGLNNITSKFVAVGLKTTDVVSLSGAHTFGRGQCVTFNNRLFNF 217          
BLAST of FC921422 vs. ExPASy Swiss-Prot
Match: PER2_ORYSJ (Peroxidase 2 OS=Oryza sativa subsp. japonica GN=PRX112 PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.633e-38
Identity = 93/212 (43.87%), Postives = 129/212 (60.85%), Query Frame = 1
Query:   67 AGAGSLLLVCLVVFGIIGVCQGGELRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNL-SLGGFEVINEIKSELESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFT 699
            A A S+ L+ LV   +       +L   FY  SC +A   ++S       S P + A L+R+HFHDCFV+GCDASVL++       E++A PN  SL GF V++ IK+++E+ C   VSCADI+A+A RDSV      P  W VL GRRD + +  ++A+  LP+P ++ +EL  NF+ KGL V D+V LSG HTIG + C  F +RLYN T
Sbjct:    2 ASASSVSLMLLVAAAMASAASA-QLSATFYDTSCPNALSTIKSAVTAAVNSEPRMGASLVRLHFHDCFVQGCDASVLLSGQ-----EQNAGPNAGSLRGFNVVDNIKTQVEAICSQTVSCADILAVAARDSV-VALGGPS-WTVLLGRRDSTTANESQANTDLPAPSSSLAELIGNFSRKGLDVTDMVALSGAHTIGQAQCQNFRDRLYNET 205          
BLAST of FC921422 vs. ExPASy Swiss-Prot
Match: PER2_ORYSI (Peroxidase 2 OS=Oryza sativa subsp. indica GN=PRX112 PE=3 SV=2)

HSP 1 Score: 159.458 bits (402), Expect = 1.633e-38
Identity = 93/212 (43.87%), Postives = 129/212 (60.85%), Query Frame = 1
Query:   67 AGAGSLLLVCLVVFGIIGVCQGGELRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNL-SLGGFEVINEIKSELESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFT 699
            A A S+ L+ LV   +       +L   FY  SC +A   ++S       S P + A L+R+HFHDCFV+GCDASVL++       E++A PN  SL GF V++ IK+++E+ C   VSCADI+A+A RDSV      P  W VL GRRD + +  ++A+  LP+P ++ +EL  NF+ KGL V D+V LSG HTIG + C  F +RLYN T
Sbjct:    2 ASASSVSLMLLVAAAMASAASA-QLSATFYDTSCPNALSTIKSAVTAAVNSEPRMGASLVRLHFHDCFVQGCDASVLLSGQ-----EQNAGPNAGSLRGFNVVDNIKTQVEAICSQTVSCADILAVAARDSV-VALGGPS-WTVLLGRRDSTTANESQANTDLPAPSSSLAELIGNFSRKGLDVTDMVALSGAHTIGQAQCQNFRDRLYNET 205          
BLAST of FC921422 vs. ExPASy Swiss-Prot
Match: PERN_ARMRU (Peroxidase N OS=Armoracia rusticana GN=HRPN PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.133e-38
Identity = 93/206 (45.15%), Postives = 122/206 (59.22%), Query Frame = 1
Query:   91 VCLVVFGIIGVCQG--GELRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNL-SLGGFEVINEIKSELESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFT 699
            V L VF +  +C     +L  + Y  SC +   IVR        +   + A LIR+HFHDCFV GCDASVL++   G  +E+ A+PN+ S+ GFEVI+ IK+ +E+ CPG+VSCADI+ LA RDSV         W V  GR+DG V+  + A+ L PSPF     +   F   GL V D+V LSG HT G + C  FSNRL+NFT
Sbjct:   12 VLLTVFTLCMLCSAVRAQLSPDIYAKSCPNLLQIVRDQVKIALKAEIRMAASLIRLHFHDCFVNGCDASVLLD---GTNSEKLAIPNVNSVRGFEVIDTIKAAVENACPGVVSCADILTLAARDSV--YLSGGPQWRVALGRKDGLVANQSSANNL-PSPFEPLDAIIAKFAAVGLNVTDVVALSGAHTFGQAKCDLFSNRLFNFT 211          
The following BLAST results are available for this feature:
BLAST of FC921422 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER3_ARMRU5.613e-3942.58Peroxidase C3 OS=Armoracia rusticana GN=PRXC3 PE=3... [more]
PER2_MAIZE5.613e-3945.16Peroxidase 2 OS=Zea mays GN=PER2 PE=2 SV=1[more]
PER20_ARATH5.613e-3944.12Peroxidase 20 OS=Arabidopsis thaliana GN=PER20 PE=... [more]
PER14_ARATH5.613e-3942.92Peroxidase 14 OS=Arabidopsis thaliana GN=PER14 PE=... [more]
PERE5_ARMRU9.575e-3943.92Peroxidase E5 OS=Armoracia rusticana GN=HRPE5 PE=1... [more]
PER66_MAIZE9.575e-3944.55Peroxidase 66 OS=Zea mays GN=PER66 PE=1 SV=1[more]
PER54_ARATH1.250e-3842.51Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=... [more]
PER2_ORYSJ1.633e-3843.87Peroxidase 2 OS=Oryza sativa subsp. japonica GN=PR... [more]
PER2_ORYSI1.633e-3843.87Peroxidase 2 OS=Oryza sativa subsp. indica GN=PRX1... [more]
PERN_ARMRU2.133e-3845.15Peroxidase N OS=Armoracia rusticana GN=HRPN PE=2 S... [more]

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Properties
Property NameValue
Genbank descriptionC32104G08EF RVDevelopN Citrus clementina cDNA clone C32104G08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921422 ID=FC921422; Name=FC921422; organism=Citrus clementina; type=EST; length=701bp
GAAGTAAGCTTGCAGCGTTAAACTCATTTCTCTTAGTAACTAGTGACATT
AAAGATGAAGAAAGCCGCTGGGGCTGGGTCTCTTTTGTTAGTTTGCTTAG
TAGTTTTTGGTATTATAGGGGTTTGCCAAGGAGGTGAGCTAAGGAAGAAT
TTCTACAGGGACAGCTGTAAATCTGCTGAAGATATCGTCAGGAGCATCAC
CTGGAAAAATGCCGCCAGTAACCCTGACTTGCCGGCCAAGCTTATCAGAA
TGCATTTCCATGACTGCTTTGTTAGGGGTTGCGATGCGTCGGTTTTGATA
AACTCAACTGCAGGTAACAAAGCAGAGAGGGATGCAGTTCCGAATCTATC
TTTGGGAGGTTTCGAAGTTATTAATGAGATTAAATCGGAGCTCGAGAGCA
GGTGTCCAGGAATTGTTTCTTGTGCCGATATCGTAGCTTTGGCTACAAGG
GATTCTGTTTCATTCCAATTTCAAAAACCGGACCTGTGGGAAGTGCTCAC
CGGTAGAAGAGATGGCAGTGTGTCCATAGCTGCTGAGGCCGATCTGCTGC
TTCCTTCACCTTTTGCCAACTTCAGTGAACTCAAGAAAAATTTTAACGAC
AAAGGTCTCACTGTCAAAGATCTTGTAGTCCTTTCAGGTGGCCACACAAT
CGGAGTTTCGCACTGCACCTTCTTCAGCAACAGGCTCTACAATTTCACAG
G
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