FC921422

Overview
NameFC921422
Unique NameFC921422
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length701
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921422 vs. ExPASy Swiss-Prot
Match: PER23_ARATH (Peroxidase 23 OS=Arabidopsis thaliana GN=PER23 PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.133e-38
Identity = 86/209 (41.15%), Postives = 126/209 (60.29%), Query Frame = 1
Query:   76 GSLLLVCLVVFGIIGVCQGGELRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNL-SLGGFEVINEIKSELESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLT-VKDLVVLSGGHTIGVSHCTFFSNRLYNF 696
            G+L++ CL+   +       +LR +FY  +C    +I+         ++P + A L+R+HFHDCFVRGCDAS+L++++   + E+DA PN  S+ GF+VI+ +K+ +E  CP  VSCADI+ +A++  +S        W V  GRRD   +  A A+  LPSPF+  ++LK  F D GL    DLV LSGGHT G + C F + RLYNF
Sbjct:   13 GALIVGCLL---LQASNSNAQLRPDFYFRTCPPIFNIIGDTIVNELRTDPRIAASLLRLHFHDCFVRGCDASILLDNSTSFRTEKDAAPNKNSVRGFDVIDRMKAAIERACPRTVSCADIITIASQ--ISVLLSGGPWWPVPLGRRDSVEAFFALANTALPSPFSTLTQLKTAFADVGLNRPSDLVALSGGHTFGKAQCQFVTPRLYNF 216          
BLAST of FC921422 vs. ExPASy Swiss-Prot
Match: PER52_ARATH (Peroxidase 52 OS=Arabidopsis thaliana GN=PER52 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.786e-38
Identity = 87/207 (42.03%), Postives = 124/207 (59.90%), Query Frame = 1
Query:   82 LLLVCLVVFGIIGVCQGGELRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNL-SLGGFEVINEIKSELESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFT 699
            +L+V L++ G        +L  NFY  SC +    V++       S   + A ++R+ FHDCFV GCD S+L++ T+    E++A PN  S  GF VI+ IKS +E  CPG+VSCADI+A+A RDSV      P+ W V  GRRD   +  A A+  +P+P ++ S+L  +F+  GL+ +D+V LSG HTIG S CT F  R+YN T
Sbjct:   11 VLVVTLLLQGDNNYVVEAQLTTNFYSTSCPNLLSTVQTAVKSAVNSEARMGASILRLFFHDCFVNGCDGSILLDDTSSFTGEQNAAPNRNSARGFNVIDNIKSAVEKACPGVVSCADILAIAARDSV-VALGGPN-WNVKVGRRDARTASQAAANSNIPAPTSSLSQLISSFSAVGLSTRDMVALSGAHTIGQSRCTNFRARIYNET 215          
BLAST of FC921422 vs. ExPASy Swiss-Prot
Match: PER13_ARATH (Peroxidase 13 OS=Arabidopsis thaliana GN=PER13 PE=1 SV=2)

HSP 1 Score: 158.688 bits (400), Expect = 2.786e-38
Identity = 94/204 (46.08%), Postives = 124/204 (60.78%), Query Frame = 1
Query:   79 SLLLVCLVVFGIIGVCQGGELRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNLSLGGFEVINEIKSELESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLS-GGHTIGVSHCTFFSNRL 687
            +L LV L     +G     +L+  FY ++C SAE IVR +  +   ++P   A L+R+ FHDCFV GCD S+LI    GN  ER A  N  + GF+VI+E KSELE  CPG+VSCADIVALA RD+++    K   +EV TGRRDG ++    A   LP    + + LK  F +KGL+ +DLV+LS G HTIG + C F   RL
Sbjct:    5 ALFLVLLYFHDQLGY-SAAQLQFGFYSETCPSAESIVRDVVQQAVTNDPGKAAVLLRLQFHDCFVEGCDGSILIKH-GGNDDERFAAGNAGVAGFDVIDEAKSELERFCPGVVSCADIVALAARDAIA--EAKGPFYEVPTGRRDGLIANVDHAK-NLPDVQDSINTLKSKFREKGLSDQDLVLLSAGAHTIGTTACFFVIPRL 203          
BLAST of FC921422 vs. ExPASy Swiss-Prot
Match: PER67_ARATH (Peroxidase 67 OS=Arabidopsis thaliana GN=PER67 PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 4.752e-38
Identity = 86/206 (41.75%), Postives = 124/206 (60.19%), Query Frame = 1
Query:   82 LLLVCLVVFGIIGVCQGGELRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVP-NLSLGGFEVINEIKSELESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDG-SVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYN 693
            L +V L++  ++      +L ++FY++SC S   +VR +  +  A  P + A L+R+ FHDCFV GCD S+L++ T     E+ + P N S+ GFEVI++IK ++E  CPGIVSCADI+A+  RDSV      P  W V  GRRD  + + AA    ++P P    S L   F  +GL+ +D+V LSG HTIG + C  F NR+YN
Sbjct:    2 LKVVLLMMIMMLASQSEAQLNRDFYKESCPSLFLVVRRVVKRAVAREPRMGASLLRLFFHDCFVNGCDGSLLLDDTPSFLGEKTSGPSNNSVRGFEVIDKIKFKVEKMCPGIVSCADILAITARDSV-LLLGGPG-WSVKLGRRDSTTANFAAANSGVIPPPITTLSNLINRFKAQGLSTRDMVALSGAHTIGRAQCVTFRNRIYN 205          
BLAST of FC921422 vs. ExPASy Swiss-Prot
Match: PER32_ARATH (Peroxidase 32 OS=Arabidopsis thaliana GN=PER32 PE=1 SV=3)

HSP 1 Score: 157.918 bits (398), Expect = 4.752e-38
Identity = 87/208 (41.83%), Postives = 122/208 (58.65%), Query Frame = 1
Query:   82 LLLVCLVVFGIIGVCQGGELRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNL-SLGGFEVINEIKSELESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGL-TVKDLVVLSGGHTIGVSHCTFFSNRLYNFT 699
            + L CL++   I   Q   L   FY ++C S   IVR        S+P + A ++R+HFHDCFV GCDAS+L+++T   + E+DA PN  S  GF VI+ +K+ +E+ CP  VSCADI+ +A + +V+        W V  GRRD   +  A A+  LP+PF    +LK +F + GL    DLV LSGGHT G + C F  +RLYNF+
Sbjct:   15 MTLGCLLLHSSISSAQ---LTPTFYDNTCPSVFTIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAAPNANSARGFPVIDRMKAAVETACPRTVSCADILTIAAQQAVN--LAGGPSWRVPLGRRDSLQAFFALANTNLPAPFFTLPQLKASFQNVGLDRPSDLVALSGGHTFGKNQCQFIMDRLYNFS 217          
BLAST of FC921422 vs. ExPASy Swiss-Prot
Match: PER1A_ARMRU (Peroxidase C1A OS=Armoracia rusticana GN=PRXC1A PE=1 SV=2)

HSP 1 Score: 157.918 bits (398), Expect = 4.752e-38
Identity = 86/206 (41.75%), Postives = 121/206 (58.74%), Query Frame = 1
Query:   88 LVCLVVFGIIGVCQGGELRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNL-SLGGFEVINEIKSELESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLT-VKDLVVLSGGHTIGVSHCTFFSNRLYNFT 699
            LVCL++   +   Q   L   FY +SC +  +IVR        S+P + A ++R+HFHDCFV GCDAS+L+++T   + E+DA  N  S  GF VI+ +K+ +ES CP  VSCAD++ +A + SV+        W V  GRRD   +    A+  LP+PF    +LK +F + GL    DLV LSGGHT G + C F  +RLYNF+
Sbjct:   18 LVCLILHASLSDAQ---LTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVT--LAGGPSWRVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFIMDRLYNFS 218          
BLAST of FC921422 vs. ExPASy Swiss-Prot
Match: PER1_MAIZE (Peroxidase 1 OS=Zea mays GN=PER1 PE=1 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 8.105e-38
Identity = 91/188 (48.40%), Postives = 116/188 (61.70%), Query Frame = 1
Query:  136 ELRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLIN-STAGNKAERDAVP-NLSLGGFEVINEIKSELESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYN 693
            +LR  FY  SC +AE +VR       A +  + A LIR+HFHDCFVRGCD SVL+  +  G + ERDA+P N SL GF+VI+  K+ +E  CP  VSCADIVA A RDS+S        ++V  GRRDG VS A E  + LP P +    L   F  K L+V+D+VVLSG HT+G S C  F  R++N
Sbjct:   34 QLRVGFYDTSCPNAEALVRQAVAAAFAKDAGIAAGLIRLHFHDCFVRGCDGSVLLTVNPGGGQTERDALPNNPSLRGFDVIDAAKTAVEQSCPRTVSCADIVAFAARDSISLTGSVS--YQVPAGRRDGRVSNATET-VDLPPPTSTAQSLTDLFKAKELSVEDMVVLSGAHTVGRSFCASFFKRVWN 218          
BLAST of FC921422 vs. ExPASy Swiss-Prot
Match: PER18_ARATH (Peroxidase 18 OS=Arabidopsis thaliana GN=PER18 PE=2 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 8.105e-38
Identity = 94/202 (46.53%), Postives = 121/202 (59.90%), Query Frame = 1
Query:   79 SLLLVCLVVFGIIGVCQGGELRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNLSLGGFEVINEIKSELESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNR 684
            SLLL+ L+   +       EL  NFY  SC  AE IVR+     ++S+P +  KL+R+ FHDCFV+GCD SVLI    GN  ER    N SLGGF VI  +K+ LE  CPG VSCADI+ LA RD+V  +     +  + TGRRDG VS+AA     +        ++   F+ KGL+V DLVVLSG HTIG +HC  F++R
Sbjct:   17 SLLLLLLLSSSV------AELSFNFYAGSCPGAELIVRNTVRSASSSDPSVLGKLLRLIFHDCFVQGCDGSVLIR---GNGTERSDPGNASLGGFAVIESVKNILEIFCPGTVSCADILVLAARDAV--EALGGPVVPIPTGRRDGRVSMAANVRPNIIDTDFTVDKMINIFSSKGLSVHDLVVLSGAHTIGAAHCNTFNSR 207          
BLAST of FC921422 vs. ExPASy Swiss-Prot
Match: PERX_NICSY (Lignin-forming anionic peroxidase OS=Nicotiana sylvestris PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.383e-37
Identity = 87/212 (41.04%), Postives = 126/212 (59.43%), Query Frame = 1
Query:   61 KAAGAGSLLLVCLVVFGIIGVCQGGELRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNL-SLGGFEVINEIKSELESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYN 693
            KAA    LLL C+            +L   FY ++C +A + +R+   +  +S   + A LIR+HFHDCFV+GCDAS+L++ T   ++E+ A+PNL S  GF +I + K E+E  CPG+VSCADI+ +A RD+ S     P  W V  GRRD + +    A+  LP PF   + L  +F  KGL+ +D+V LSG HTIG + C  F +R+Y+
Sbjct:   11 KAAIFSLLLLSCMQCHA--------QLSATFYDNTCPNALNTIRTSVRQAISSERRMAASLIRLHFHDCFVQGCDASILLDETPSIESEKTALPNLGSARGFGIIEDAKREVEKICPGVVSCADILTVAARDA-SAAVGGPS-WTVKLGRRDSTTASKTLAETDLPGPFDPLNRLISSFASKGLSTRDMVALSGAHTIGQAQCFLFRDRIYS 212          
BLAST of FC921422 vs. ExPASy Swiss-Prot
Match: PER68_ARATH (Peroxidase 68 OS=Arabidopsis thaliana GN=PER68 PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.358e-37
Identity = 86/205 (41.95%), Postives = 118/205 (57.56%), Query Frame = 1
Query:   91 VCLVVFGIIGVCQGGELRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVP-NLSLGGFEVINEIKSELESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDG-SVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFT 699
            V L+   ++G     +LR +FY DSC S    VR +  +  A    + A L+R+ FHDCFV GCDAS+L++ T     E+ A P N S+ G+EVI+ IKS +E  CPG+VSCADI+A+  RDSV     +   W V  GRRD  + S +     +LP P +    L   F   GL+ +D+V LSG HTIG + C  F +R+YN T
Sbjct:   14 VVLLFIVMLGSQAQAQLRTDFYSDSCPSLLPTVRRVVQREVAKERRIAASLLRLFFHDCFVNGCDASILLDDTRSFLGEKTAGPNNNSVRGYEVIDAIKSRVERLCPGVVSCADILAITARDSVLLMGGRG--WSVKLGRRDSITASFSTANSGVLPPPTSTLDNLINLFRANGLSPRDMVALSGAHTIGQARCVTFRSRIYNST 216          
The following BLAST results are available for this feature:
BLAST of FC921422 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER23_ARATH2.133e-3841.15Peroxidase 23 OS=Arabidopsis thaliana GN=PER23 PE=... [more]
PER52_ARATH2.786e-3842.03Peroxidase 52 OS=Arabidopsis thaliana GN=PER52 PE=... [more]
PER13_ARATH2.786e-3846.08Peroxidase 13 OS=Arabidopsis thaliana GN=PER13 PE=... [more]
PER67_ARATH4.752e-3841.75Peroxidase 67 OS=Arabidopsis thaliana GN=PER67 PE=... [more]
PER32_ARATH4.752e-3841.83Peroxidase 32 OS=Arabidopsis thaliana GN=PER32 PE=... [more]
PER1A_ARMRU4.752e-3841.75Peroxidase C1A OS=Armoracia rusticana GN=PRXC1A PE... [more]
PER1_MAIZE8.105e-3848.40Peroxidase 1 OS=Zea mays GN=PER1 PE=1 SV=1[more]
PER18_ARATH8.105e-3846.53Peroxidase 18 OS=Arabidopsis thaliana GN=PER18 PE=... [more]
PERX_NICSY1.383e-3741.04Lignin-forming anionic peroxidase OS=Nicotiana syl... [more]
PER68_ARATH2.358e-3741.95Peroxidase 68 OS=Arabidopsis thaliana GN=PER68 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC32104G08EF RVDevelopN Citrus clementina cDNA clone C32104G08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921422 ID=FC921422; Name=FC921422; organism=Citrus clementina; type=EST; length=701bp
GAAGTAAGCTTGCAGCGTTAAACTCATTTCTCTTAGTAACTAGTGACATT
AAAGATGAAGAAAGCCGCTGGGGCTGGGTCTCTTTTGTTAGTTTGCTTAG
TAGTTTTTGGTATTATAGGGGTTTGCCAAGGAGGTGAGCTAAGGAAGAAT
TTCTACAGGGACAGCTGTAAATCTGCTGAAGATATCGTCAGGAGCATCAC
CTGGAAAAATGCCGCCAGTAACCCTGACTTGCCGGCCAAGCTTATCAGAA
TGCATTTCCATGACTGCTTTGTTAGGGGTTGCGATGCGTCGGTTTTGATA
AACTCAACTGCAGGTAACAAAGCAGAGAGGGATGCAGTTCCGAATCTATC
TTTGGGAGGTTTCGAAGTTATTAATGAGATTAAATCGGAGCTCGAGAGCA
GGTGTCCAGGAATTGTTTCTTGTGCCGATATCGTAGCTTTGGCTACAAGG
GATTCTGTTTCATTCCAATTTCAAAAACCGGACCTGTGGGAAGTGCTCAC
CGGTAGAAGAGATGGCAGTGTGTCCATAGCTGCTGAGGCCGATCTGCTGC
TTCCTTCACCTTTTGCCAACTTCAGTGAACTCAAGAAAAATTTTAACGAC
AAAGGTCTCACTGTCAAAGATCTTGTAGTCCTTTCAGGTGGCCACACAAT
CGGAGTTTCGCACTGCACCTTCTTCAGCAACAGGCTCTACAATTTCACAG
G
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