FC921422

Overview
NameFC921422
Unique NameFC921422
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length701
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921422 vs. ExPASy Swiss-Prot
Match: PER70_MAIZE (Peroxidase 70 OS=Zea mays GN=PER70 PE=1 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 5.254e-37
Identity = 87/207 (42.03%), Postives = 122/207 (58.94%), Query Frame = 1
Query:   82 LLLVCLVVFGIIGVCQGGELRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNL-SLGGFEVINEIKSELESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFT 699
            ++L+CL    +       +L   FY  SC  A   +++      A    + A L+R+HFHDCFV+GCD SVL+N TA    E+ A PN+ S+ GF V++ IK+++E+ CPG+VSCADI+A+A RDSV      P  W VL GRRD + +  A A+  LP+P  + + L   F  K L+  DLV LSG HTIG++ C  F   +YN T
Sbjct:   12 MVLLCLAAAAVASA----QLSPTFYSRSCPRALATIKAAVTAAVAQEARMGASLLRLHFHDCFVQGCDGSVLLNDTATFTGEQTANPNVGSIRGFGVVDNIKAQVEAVCPGVVSCADILAVAARDSV-VALGGPS-WRVLLGRRDSTTASLALANSDLPAPSLDLANLTAAFAKKRLSRTDLVALSGAHTIGLAQCKNFRAHIYNDT 212          
BLAST of FC921422 vs. ExPASy Swiss-Prot
Match: PER59_ARATH (Peroxidase 59 OS=Arabidopsis thaliana GN=PER59 PE=1 SV=2)

HSP 1 Score: 154.066 bits (388), Expect = 6.862e-37
Identity = 91/206 (44.17%), Postives = 120/206 (58.25%), Query Frame = 1
Query:   91 VCLVVFGIIGVCQG--GELRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNL-SLGGFEVINEIKSELESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFT 699
            V L VF +  +C G   +L  + Y  SC +   IVR        +   + A LIR+HFHDCFV GCDAS+L++   G  +E+ A+PN+ S  GFEVI+ IK+ +E+ CPG+VSCADI+ LA RDSV         W V  GR+DG V+    A+  LPSPF     +   F    L + D+V LSG HT G + C  FSNRL+NFT
Sbjct:   12 VLLTVFTLCMLCSGVRAQLSPDIYAKSCPNLVQIVRKQVAIALKAEIRMAASLIRLHFHDCFVNGCDASLLLD---GADSEKLAIPNINSARGFEVIDTIKAAVENACPGVVSCADILTLAARDSVVLSGGPG--WRVALGRKDGLVANQNSAN-NLPSPFEPLDAIIAKFVAVNLNITDVVALSGAHTFGQAKCAVFSNRLFNFT 211          
BLAST of FC921422 vs. ExPASy Swiss-Prot
Match: PER42_MAIZE (Peroxidase 42 OS=Zea mays GN=PER42 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 8.962e-37
Identity = 87/218 (39.91%), Postives = 125/218 (57.34%), Query Frame = 1
Query:   64 AAGAGSLLLVCLVVFGIIGVCQGG----ELRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNLSLG--GFEVINEIKSELESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFT 699
            A  +GS L++ L+V  +           +L   FY  SC SA   + S      A    + A L+R+HFHDCF++GCDAS+L+N T+G   E+   PNL+L    F+V+N IK+++E+ CPG+VSCADI+A+A RD V      P  W VL GRRD + S  ++    LP P ++   L   ++ K L   D+V LSG HTIG + C+ F+  +YN T
Sbjct:    2 ATSSGSCLIISLLVVVVAAALSASTASAQLSSTFYDTSCPSAMSTISSGVNSAVAQQARVGASLLRLHFHDCFIQGCDASILLNDTSG---EQTQPPNLTLNPRAFDVVNSIKAQVEAACPGVVSCADILAVAARDGV-VALGGPS-WTVLLGRRDSTGSFPSQTS-DLPPPTSSLQALLAAYSKKNLDATDMVALSGAHTIGQAQCSSFNGHIYNDT 213          
BLAST of FC921422 vs. ExPASy Swiss-Prot
Match: PER63_ARATH (Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.170e-36
Identity = 88/204 (43.14%), Postives = 117/204 (57.35%), Query Frame = 1
Query:   82 LLLVCLVVFGIIGVCQGGELRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNLSL--GGFEVINEIKSELESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRL 687
            LLL+CL  F  +       L  +FY  SC    DI+R        S P   A  +R+ FHDCF  GCDASVL++STA N AERD+  NLSL   GF+V+   K+ LE  CP  VSC+DI+A+A RD +         +E+  GRRD   S ++    LLP P    S+L   F+ +G +V+++V LSG HTIG SHC  F+NR+
Sbjct:   14 LLLLCLS-FQSLSFAAESHLTVDFYSKSCPKFLDIIRETITNKQISTPTTAAAALRLFFHDCFPNGCDASVLVSSTAFNTAERDSSINLSLPGDGFDVVIRAKTALELACPNTVSCSDIIAVAVRDLL--VTVGGPYYEISLGRRDSRTSKSSLVSDLLPLPSMQISKLIDQFSSRGFSVQEMVALSGAHTIGFSHCKEFTNRV 214          
BLAST of FC921422 vs. ExPASy Swiss-Prot
Match: PER44_ARATH (Peroxidase 44 OS=Arabidopsis thaliana GN=PER44 PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.170e-36
Identity = 85/185 (45.95%), Postives = 112/185 (60.54%), Query Frame = 1
Query:  136 ELRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNLSLGGFEVINEIKSELESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVL-SGGHTIGVSHCTFFSNRL 687
            +LR  FY  SC  AE IV S+      S+  + A  +RM FHDCFVRGCDAS+LI+   G  +E+   PN S+ G+E+I+E K +LE+ CP  VSCADIV LATRDSV+        + V TGRRDG  S     D+ LP P    S   + F  +G+   D+V L  GGH++GV+HC+ F +RL
Sbjct:   21 QLRTGFYSRSCPRAESIVASVVANRFRSDKSITAAFLRMQFHDCFVRGCDASLLIDPRPGRPSEKSTGPNASVRGYEIIDEAKRQLEAACPRTVSCADIVTLATRDSVA--LAGGPRFSVPTGRRDGLRS--NPNDVNLPGPTIPVSASIQLFAAQGMNTNDMVTLIGGGHSVGVAHCSLFQDRL 201          
BLAST of FC921422 vs. ExPASy Swiss-Prot
Match: PER4_ARATH (Peroxidase 4 OS=Arabidopsis thaliana GN=PER4 PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.529e-36
Identity = 82/187 (43.85%), Postives = 119/187 (63.64%), Query Frame = 1
Query:  136 ELRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNL-SLGGFEVINEIKSELESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYN 693
            +L   FY  +C++A   +RS      +    + A LIR+HFHDCFV GCDASV++ +T   ++ERD++ N  S  GFEVI++ KS +ES CPG+VSCADI+A+A RD  + ++     ++V  GRRD + +  A AD  LP+  A+ ++L + F  KGL  +DLV LSG HT+G + C  F  RLY+
Sbjct:   20 QLSPTFYDQTCQNALSTIRSSIRTAISRERRMAASLIRLHFHDCFVNGCDASVMLVATPTMESERDSLANFQSARGFEVIDQAKSAVESVCPGVVSCADIIAVAARD--ASEYVGGPRYDVKVGRRDSTNAFRAIADRDLPNFRASLNDLSELFLRKGLNTRDLVALSGAHTLGQAQCLTFKGRLYD 204          
BLAST of FC921422 vs. ExPASy Swiss-Prot
Match: PER41_ARATH (Peroxidase 41 OS=Arabidopsis thaliana GN=PER41 PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.529e-36
Identity = 89/206 (43.20%), Postives = 117/206 (56.80%), Query Frame = 1
Query:   79 SLLLVCLVVFGIIGVCQGGELRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNLSLGG--FEVINEIKSELESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLY 690
            ++L V LV    I       L K++Y+ +C     IVR          P   A  +R+ FHDCF+ GCDASVLI + + NKAERD   N SL G  F+++  IK+ LE  CPG+VSCADI+A ATRD V+        +EV  GR+DG  S A +    LP    +  ++   F   G T+K+LV LSGGHTIG SHC  FSNR++
Sbjct:    6 NVLFVVLVFVPSIYSAPPPNLTKDYYQKTCPDFNKIVRETVTPKQGQQPTTAAGTLRLFFHDCFMEGCDASVLIATNSFNKAERDDDLNESLPGDAFDIVTRIKTALELSCPGVVSCADILAQATRDLVT--MVGGPFYEVKLGRKDGFESKAHKVKGNLPLANQSVPDMLSIFKKNGFTLKELVALSGGHTIGFSHCKEFSNRIF 209          
BLAST of FC921422 vs. ExPASy Swiss-Prot
Match: PER2_CUCSA (Peroxidase 2 (Fragment) OS=Cucumis sativus PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.529e-36
Identity = 81/179 (45.25%), Postives = 106/179 (59.22%), Query Frame = 1
Query:  151 FYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNLSLGGFEVINEIKSELESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRL 687
            FY +SC    +IVR +  +   S+    A+LIR+HFHDCFV GCD SVL+    G  +E  A  N ++ GF ++N IK+ +E  CPG+VSCADI+A+A+  SV+        WEV  GRRD   +    A   LPSPF N ++LK+ F+   L   DLV LSG HT G S C FF  RL
Sbjct:    2 FYDESCPDVSNIVRRVVQQALVSDERAGARLIRLHFHDCFVNGCDGSVLLEDQPGVVSELAAPGNANITGFNIVNNIKAAVEKACPGVVSCADILAIASVGSVN--LAGGPCWEVQLGRRDSRRANLQGAIDGLPSPFENVTQLKRKFDRVDLDSTDLVALSGAHTFGKSRCQFFDRRL 178          
BLAST of FC921422 vs. ExPASy Swiss-Prot
Match: PER1C_ARMRU (Peroxidase C1C (Fragment) OS=Armoracia rusticana GN=PRXC1C PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 1.996e-36
Identity = 81/190 (42.63%), Postives = 112/190 (58.95%), Query Frame = 1
Query:  136 ELRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNL-SLGGFEVINEIKSELESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLT-VKDLVVLSGGHTIGVSHCTFFSNRLYNFT 699
            +L   FY +SC +  +IVR I      S+P + A ++R+HFHDCFV GCDAS+L+++T   + E+DA  N  S  GF V++ IK+ +E  CP  VSCAD++ +A + SV+        W V  GRRD   +    A+  LP+P     ELK  F + GL    DLV LSGGHT G + C F  +RLYNF+
Sbjct:   10 QLTPTFYDNSCPNVSNIVRDIIINELRSDPSIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFPVVDRIKAAVERACPRTVSCADVLTIAAQQSVN--LAGGPSWRVPLGRRDSRQAFLDLANANLPAPSFTLPELKAAFANVGLNRPSDLVALSGGHTFGKNQCRFIMDRLYNFS 197          
BLAST of FC921422 vs. ExPASy Swiss-Prot
Match: PER12_ARATH (Peroxidase 12 OS=Arabidopsis thaliana GN=PER12 PE=1 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 1.996e-36
Identity = 83/185 (44.86%), Postives = 122/185 (65.95%), Query Frame = 1
Query:  148 NFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNLSL--GGFEVINEIKSELESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLL--LPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLY 690
            NFY+ +C   E+I+R    K    +  L A ++R+HFHDCFV+GC+ASVL+  +A    E+ ++PNL+L    F VIN +++ ++ +C  +VSC+DI+ALA RDSV      PD + V  GRRD S++ A++   L  LP PF N S+L  +F ++ L + DLV LSGGHTIG++HC  F++RLY
Sbjct:   47 NFYQKACPKVENIIRKELKKVFKRDIGLAAAILRIHFHDCFVQGCEASVLLAGSASGPGEQSSIPNLTLRQQAFVVINNLRALVQKKCGQVVSCSDILALAARDSVVLS-GGPD-YAVPLGRRD-SLAFASQETTLNNLPPPFFNASQLIADFANRNLNITDLVALSGGHTIGIAHCPSFTDRLY 228          
The following BLAST results are available for this feature:
BLAST of FC921422 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER70_MAIZE5.254e-3742.03Peroxidase 70 OS=Zea mays GN=PER70 PE=1 SV=1[more]
PER59_ARATH6.862e-3744.17Peroxidase 59 OS=Arabidopsis thaliana GN=PER59 PE=... [more]
PER42_MAIZE8.962e-3739.91Peroxidase 42 OS=Zea mays GN=PER42 PE=2 SV=1[more]
PER63_ARATH1.170e-3643.14Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=... [more]
PER44_ARATH1.170e-3645.95Peroxidase 44 OS=Arabidopsis thaliana GN=PER44 PE=... [more]
PER4_ARATH1.529e-3643.85Peroxidase 4 OS=Arabidopsis thaliana GN=PER4 PE=2 ... [more]
PER41_ARATH1.529e-3643.20Peroxidase 41 OS=Arabidopsis thaliana GN=PER41 PE=... [more]
PER2_CUCSA1.529e-3645.25Peroxidase 2 (Fragment) OS=Cucumis sativus PE=2 SV... [more]
PER1C_ARMRU1.996e-3642.63Peroxidase C1C (Fragment) OS=Armoracia rusticana G... [more]
PER12_ARATH1.996e-3644.86Peroxidase 12 OS=Arabidopsis thaliana GN=PER12 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC32104G08EF RVDevelopN Citrus clementina cDNA clone C32104G08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921422 ID=FC921422; Name=FC921422; organism=Citrus clementina; type=EST; length=701bp
GAAGTAAGCTTGCAGCGTTAAACTCATTTCTCTTAGTAACTAGTGACATT
AAAGATGAAGAAAGCCGCTGGGGCTGGGTCTCTTTTGTTAGTTTGCTTAG
TAGTTTTTGGTATTATAGGGGTTTGCCAAGGAGGTGAGCTAAGGAAGAAT
TTCTACAGGGACAGCTGTAAATCTGCTGAAGATATCGTCAGGAGCATCAC
CTGGAAAAATGCCGCCAGTAACCCTGACTTGCCGGCCAAGCTTATCAGAA
TGCATTTCCATGACTGCTTTGTTAGGGGTTGCGATGCGTCGGTTTTGATA
AACTCAACTGCAGGTAACAAAGCAGAGAGGGATGCAGTTCCGAATCTATC
TTTGGGAGGTTTCGAAGTTATTAATGAGATTAAATCGGAGCTCGAGAGCA
GGTGTCCAGGAATTGTTTCTTGTGCCGATATCGTAGCTTTGGCTACAAGG
GATTCTGTTTCATTCCAATTTCAAAAACCGGACCTGTGGGAAGTGCTCAC
CGGTAGAAGAGATGGCAGTGTGTCCATAGCTGCTGAGGCCGATCTGCTGC
TTCCTTCACCTTTTGCCAACTTCAGTGAACTCAAGAAAAATTTTAACGAC
AAAGGTCTCACTGTCAAAGATCTTGTAGTCCTTTCAGGTGGCCACACAAT
CGGAGTTTCGCACTGCACCTTCTTCAGCAACAGGCTCTACAATTTCACAG
G
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