FC921422

Overview
NameFC921422
Unique NameFC921422
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length701
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921422 vs. ExPASy Swiss-Prot
Match: PER26_ARATH (Probable peroxidase 26 OS=Arabidopsis thaliana GN=PER26 PE=2 SV=2)

HSP 1 Score: 139.813 bits (351), Expect = 1.339e-32
Identity = 82/192 (42.71%), Postives = 118/192 (61.46%), Query Frame = 1
Query:  136 ELRKNFYR--DSCKSAEDIVR---SITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNLSLGGFEVINEIKSELESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNF 696
            +L  ++Y+  ++C++AE+ VR    I +KN  S   +  KL+R+ + DCFV GCDASVL+    G  +E+ A  N  LGGF +I++IK  LE RCPG+VSCADI+ LATRD+V         + V TGRRDG  S     D  LPSP  ++ +    F  +GL V D+  L G H++G +HC++  +RLYN+
Sbjct:   34 KLTWHYYKVYNTCENAENFVRHQVEIFYKNDKS---IAPKLLRLLYSDCFVSGCDASVLLE---GPNSEKMAPQNRGLGGFVLIDKIKIVLEQRCPGVVSCADILNLATRDAV--HLAGAPSYPVFTGRRDGLTSDKQTVD--LPSPSISWDQAMSYFKSRGLNVLDMATLLGSHSMGRTHCSYVVDRLYNY 215          
BLAST of FC921422 vs. ExPASy Swiss-Prot
Match: PER19_ARATH (Peroxidase 19 OS=Arabidopsis thaliana GN=PER19 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.284e-32
Identity = 80/191 (41.88%), Postives = 109/191 (57.07%), Query Frame = 1
Query:  136 ELRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNK--AERDAVPNLSLG--GFEVINEIKSELESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNF 696
            EL  ++Y   C   E +V S+T +     P      IR+ FHDCFV GCD S+LI +  G+K  AER+A  N  L   GF+ I + K+ +ES CP +VSC+DI+A+A RD +         ++V  GR DG  S A      +P   +   +L K F  KGLTV++LVVLSG HTIG +HC  F  RLY++
Sbjct:   41 ELSADYYSKKCPQLETLVGSVTSQRFKEVPISAPATIRLFFHDCFVEGCDGSILIETKKGSKKLAEREAYENKELREEGFDSIIKAKALVESHCPSLVSCSDILAIAARDFI--HLAGGPYYQVKKGRWDGKRSTAKNVPPNIPRSNSTVDQLIKLFASKGLTVEELVVLSGSHTIGFAHCKNFLGRLYDY 229          
BLAST of FC921422 vs. ExPASy Swiss-Prot
Match: PER11_ARATH (Peroxidase 11 OS=Arabidopsis thaliana GN=PER11 PE=1 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.134e-31
Identity = 68/185 (36.76%), Postives = 109/185 (58.92%), Query Frame = 1
Query:  139 LRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNL-SLGGFEVINEIKSELESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLY 690
            L  ++Y+ +C +  D+++         +P   A +IR+HFHDCFV+GCD SVL++ T   + E+ A PN+ SL G+++++ IK+ +ES CPG+VSCAD++ +  RD+          W+V  GR+D   +    A   LP+P      +   F  +GL+V+D+V L G HTIG + C  F +R+Y
Sbjct:   30 LTLDYYKSTCPTVFDVIKKEMECIVKEDPRNAAIIIRLHFHDCFVQGCDGSVLLDETETLQGEKKASPNINSLKGYKIVDRIKNIIESECPGVVSCADLLTIGARDATI--LVGGPYWDVPVGRKDSKTASYELATTNLPTPEEGLISIIAKFYSQGLSVEDMVALIGAHTIGKAQCRNFRSRIY 212          
BLAST of FC921422 vs. ExPASy Swiss-Prot
Match: PER45_ARATH (Peroxidase 45 OS=Arabidopsis thaliana GN=PER45 PE=1 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.481e-31
Identity = 79/200 (39.50%), Postives = 112/200 (56.00%), Query Frame = 1
Query:  112 IIGVCQGGELRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNLSLGG--FEVINEIKSELESR--CPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFT 699
            ++  C   +LR  FY++SC + E IVR+   +            +R+ FHDCFVRGCDAS++I S +    ERD   ++SL G  F+ + + K  ++S   C   VSCADI+ALATR+ V         + V  GRRDG +S  A     LP P  N ++L   F+  GL+  D++ LSG HTIG +HC   S R+YNF+
Sbjct:   18 LLSSCVSAQLRTGFYQNSCPNVETIVRNAVRQKFQQTFVTAPATLRLFFHDCFVRGCDASIMIASPS----ERDHPDDMSLAGDGFDTVVKAKQAVDSNPNCRNKVSCADILALATREVVVLTGGPS--YPVELGRRDGRISTKASVQSQLPQPEFNLNQLNGMFSRHGLSQTDMIALSGAHTIGFAHCGKMSKRIYNFS 211          
BLAST of FC921422 vs. ExPASy Swiss-Prot
Match: PER35_ARATH (Peroxidase 35 OS=Arabidopsis thaliana GN=PER35 PE=1 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.526e-31
Identity = 82/209 (39.23%), Postives = 113/209 (54.07%), Query Frame = 1
Query:   82 LLLVCLVVFGIIGVCQGGELRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNLSLG--GFEVINEIKSELESR--CPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNF 696
            L+ +CL++  +       +L + FY  +C + E IVR+   K            +R+ FHDCFV GCDASV+I ST  NKAE+D   N+SL   GF+V+ + K  L+S   C   VSCADI+ LATRD V         +EV  GR DG VS A+  +  LP P  N  +L   F    LT +D++ LS  HT+G +HC     R++ F
Sbjct:    9 LIGLCLII-SVFPDTTTAQLSRGFYSKTCPNVEQIVRNAVQKKIKKTFVAVPATLRLFFHDCFVNGCDASVMIQSTPKNKAEKDHPDNISLAGDGFDVVIQAKKALDSNPSCRNKVSCADILTLATRDVV--VAAGGPSYEVELGRFDGLVSTASSVEGNLPGPSDNVDKLNALFTKNKLTQEDMIALSAAHTLGFAHCGKVFKRIHKF 214          
BLAST of FC921422 vs. ExPASy Swiss-Prot
Match: PER1_HORVU (Peroxidase 1 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.253e-30
Identity = 87/214 (40.65%), Postives = 120/214 (56.07%), Query Frame = 1
Query:   55 MKKAAGAGSLLLVCLVVFGIIGVCQGGELRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNL-SLGGFEVINEIKSELESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDK-GLTVKDLVVLSGGHTIGVSHCTFFSNRLY 690
            M  ++    L+LV LV           +L   FY  SC  A   ++S       S+P + A L+R+HFHDCFV+GCDASVL++       E++A+PN  SL GF VI+ IK+++E+ C   VSCADI+ +A RDSV      P  W V  GRRD   +   EA+  LP   ++ +EL+  F  K GL   D+V LSG HTIG + C+ F  R+Y
Sbjct:    1 MASSSYTSLLVLVALVT------AASAQLSPTFYDTSCPRALATIKSGVMAAVTSDPRMGASLLRLHFHDCFVQGCDASVLLSG-----MEQNAIPNAGSLRGFGVIDSIKTQIEAICKQTVSCADILTVAARDSV-VALGGPS-WTVPLGRRDSIDANENEANTDLPGFNSSRAELEAAFLKKGGLNTVDMVALSGAHTIGQAQCSTFRARIY 201          
BLAST of FC921422 vs. ExPASy Swiss-Prot
Match: PER16_ARATH (Peroxidase 16 OS=Arabidopsis thaliana GN=PER16 PE=1 SV=2)

HSP 1 Score: 131.339 bits (329), Expect = 4.763e-30
Identity = 80/192 (41.67%), Postives = 107/192 (55.73%), Query Frame = 1
Query:  136 ELRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNLSLGG--FEVINEIKSELES--RCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFT 699
            +L+ NFYR SC + E IVR+   +            +R+ FHDCFVRGCDAS+L+ S +    E+D   + SL G  F+ + + K  L+    C   VSCADI+ALATRD V      P+ + V  GRRDG +S  A     LP P     +L   F   GL+  D++ LSG HTIG +HC  FS R+YNF+
Sbjct:   24 QLQTNFYRKSCPNVETIVRNAVRQKFQQTFVTAPATLRLFFHDCFVRGCDASILLASPS----EKDHPDDKSLAGDGFDTVAKAKQALDRDPNCRNKVSCADILALATRDVVVLT-GGPN-YPVELGRRDGRLSTVASVQHSLPQPSFKLDQLNTMFARHGLSQTDMIALSGAHTIGFAHCGKFSKRIYNFS 209          
BLAST of FC921422 vs. ExPASy Swiss-Prot
Match: PER21_ARATH (Peroxidase 21 OS=Arabidopsis thaliana GN=PER21 PE=1 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.087e-29
Identity = 71/203 (34.98%), Postives = 108/203 (53.20%), Query Frame = 1
Query:   82 LLLVCLVVFGIIGVCQGGELRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNLSLGGFEVINEIKSELESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLY 690
            LLL    +F I      GEL  N+Y++SC  AE+I+R         + +     +R  FHDC V+ CDAS+L+ +  G ++E+ +  +  +  F+ +  IK  LE  CP  VSCADIVAL+ RD +    + P +  + TGRRD   S   + + L+P+   + S +   FN  G+ V+  V L G H++G  HC    +RLY
Sbjct:   15 LLLQLFSIFHI----GNGELEMNYYKESCPKAEEIIRQQVETLYYKHGNTAVSWLRNLFHDCVVKSCDASLLLETARGVESEQKSKRSFGMRNFKYVKIIKDALEKECPSTVSCADIVALSARDGI-VMLKGPKIEMIKTGRRDSRGSYLGDVETLIPNHNDSLSSVISTFNSIGIDVEATVALLGAHSVGRVHCVNLVHRLY 212          
BLAST of FC921422 vs. ExPASy Swiss-Prot
Match: PER1_SORBI (Cationic peroxidase SPC4 (Fragment) OS=Sorghum bicolor PE=1 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 6.878e-29
Identity = 85/209 (40.67%), Postives = 111/209 (53.11%), Query Frame = 1
Query:   67 AGAGSLLLVCLVVFGIIGVCQGGELRK---------NFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNLSL--GGFEVINEIKSELESRCPG-IVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLL--LPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTI 651
            A A ++  V L+          G  R+         +FY+ SC  AE IVRS        +  L A L+R+HFHDCFV+GCDASVL++ +A    E+ A PNL+L    F+ IN+I   L   C G +VSC+D++ALA RDSV         ++V  GRRD S S A + D+L  LP P A    L    +   L   DLV LSGGHTI
Sbjct:    8 AAAAAVAAVVLICSSSTATAADGNARQPPLAPGLSFDFYKRSCPKAESIVRSFVQDAVRRDVGLAAGLLRLHFHDCFVQGCDASVLLDGSATGPGEQQAPPNLTLRPTAFKAINDIHDRLHKECGGTVVSCSDVLALAARDSV--VVSGGPSYKVPLGRRD-SASFATQQDVLSGLPPPTAAVPALLAVLSKINLDATDLVALSGGHTI 213          
BLAST of FC921422 vs. ExPASy Swiss-Prot
Match: PER6_ARATH (Peroxidase 6 OS=Arabidopsis thaliana GN=PER6 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.001e-28
Identity = 75/203 (36.95%), Postives = 106/203 (52.22%), Query Frame = 1
Query:   91 VCLVVFGIIGVCQGGELRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNLSLGG--FEVINEIKSELESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYN 693
            +CL +           L  ++Y  +C   E+ +  I      + P      +R+ FHDC V GCDAS+L+ ST    +ERDA  N SL G  F+VI  IK+ +E +CP IVSC+DI+  ATR  +S     P +  V  GR+D  VS     +  L  P      +   F   GLTV+++V L G HTIG SHC  F++R++N
Sbjct:    6 LCLFILVSSPCLLQANLSSDYYTKTCPEFEETLVQIVTDKQIAAPTTAVGTLRLFFHDCMVDGCDASILVASTPRKTSERDADINRSLPGDAFDVITRIKTAVELKCPNIVSCSDILVGATRSLIS-MVGGPRV-NVKFGRKDSLVSDMNRVEGKLARPNMTMDHIISIFESSGLTVQEMVALVGAHTIGFSHCKEFASRIFN 206          
The following BLAST results are available for this feature:
BLAST of FC921422 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER26_ARATH1.339e-3242.71Probable peroxidase 26 OS=Arabidopsis thaliana GN=... [more]
PER19_ARATH2.284e-3241.88Peroxidase 19 OS=Arabidopsis thaliana GN=PER19 PE=... [more]
PER11_ARATH1.134e-3136.76Peroxidase 11 OS=Arabidopsis thaliana GN=PER11 PE=... [more]
PER45_ARATH1.481e-3139.50Peroxidase 45 OS=Arabidopsis thaliana GN=PER45 PE=... [more]
PER35_ARATH2.526e-3139.23Peroxidase 35 OS=Arabidopsis thaliana GN=PER35 PE=... [more]
PER1_HORVU1.253e-3040.65Peroxidase 1 OS=Hordeum vulgare PE=2 SV=1[more]
PER16_ARATH4.763e-3041.67Peroxidase 16 OS=Arabidopsis thaliana GN=PER16 PE=... [more]
PER21_ARATH3.087e-2934.98Peroxidase 21 OS=Arabidopsis thaliana GN=PER21 PE=... [more]
PER1_SORBI6.878e-2940.67Cationic peroxidase SPC4 (Fragment) OS=Sorghum bic... [more]
PER6_ARATH2.001e-2836.95Peroxidase 6 OS=Arabidopsis thaliana GN=PER6 PE=2 ... [more]

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Properties
Property NameValue
Genbank descriptionC32104G08EF RVDevelopN Citrus clementina cDNA clone C32104G08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921422 ID=FC921422; Name=FC921422; organism=Citrus clementina; type=EST; length=701bp
GAAGTAAGCTTGCAGCGTTAAACTCATTTCTCTTAGTAACTAGTGACATT
AAAGATGAAGAAAGCCGCTGGGGCTGGGTCTCTTTTGTTAGTTTGCTTAG
TAGTTTTTGGTATTATAGGGGTTTGCCAAGGAGGTGAGCTAAGGAAGAAT
TTCTACAGGGACAGCTGTAAATCTGCTGAAGATATCGTCAGGAGCATCAC
CTGGAAAAATGCCGCCAGTAACCCTGACTTGCCGGCCAAGCTTATCAGAA
TGCATTTCCATGACTGCTTTGTTAGGGGTTGCGATGCGTCGGTTTTGATA
AACTCAACTGCAGGTAACAAAGCAGAGAGGGATGCAGTTCCGAATCTATC
TTTGGGAGGTTTCGAAGTTATTAATGAGATTAAATCGGAGCTCGAGAGCA
GGTGTCCAGGAATTGTTTCTTGTGCCGATATCGTAGCTTTGGCTACAAGG
GATTCTGTTTCATTCCAATTTCAAAAACCGGACCTGTGGGAAGTGCTCAC
CGGTAGAAGAGATGGCAGTGTGTCCATAGCTGCTGAGGCCGATCTGCTGC
TTCCTTCACCTTTTGCCAACTTCAGTGAACTCAAGAAAAATTTTAACGAC
AAAGGTCTCACTGTCAAAGATCTTGTAGTCCTTTCAGGTGGCCACACAAT
CGGAGTTTCGCACTGCACCTTCTTCAGCAACAGGCTCTACAATTTCACAG
G
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