FC921431

Overview
NameFC921431
Unique NameFC921431
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length651
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC921431 vs. ExPASy Swiss-Prot
Match: THI4_YEAST (Thiazole biosynthetic enzyme, mitochondrial OS=Saccharomyces cerevisiae GN=THI4 PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 3.269e-32
Identity = 48/76 (63.16%), Postives = 64/76 (84.21%), Query Frame = 1 
Query:  409 AKN-PNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIGYDEQDSHVVIKHAALFTSTIMSKLLARP 633
            AKN P++++ IIE SV+PGGG+WL GQLFSAMV+RKPAH+FL EL I Y+++  +VV+KHAALF ST++SK+L  P
Sbjct:   85 AKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYEDEGDYVVVKHAALFISTVLSKVLQLP 160

HSP 2 Score: 56.6102 bits (135), Expect = 3.269e-32
Identity = 28/53 (52.83%), Postives = 36/53 (67.92%), Query Frame = 3 
Query:  255 DLNTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSK 413
            D + FKF PI+ES VSR MT RY  D+  +A +D    GAGS+GLS AY ++K
Sbjct:   34 DWSDFKFAPIRESTVSRAMTSRYFKDLDKFAVSDVIIVGAGSSGLSAAYVIAK 86
The following BLAST results are available for this feature:
BLAST of FC921431 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
THI4_YEAST3.269e-3263.16Thiazole biosynthetic enzyme, mitochondrial OS=Sac... [more]

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Properties
Property NameValue
Genbank descriptionC32104H05EF RVDevelopN Citrus clementina cDNA clone C32104H05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921431 ID=FC921431; Name=FC921431; organism=Citrus clementina; type=EST; length=651bp
TCATCACTGCTGCAAATCAAATTACTTCTCATTATCAAACTTCTAAGCAG
CAGGGGAAGGAGGGGTAAAAAAAAAAAAACATGGCAGCCATAGCTTCTAC
AGCTTTCGCTCCTTCAGTTTCGTCTACCACCAATAAGCTCTTTGACTCAT
CCTTTCATGGGGCTCCCATGTCACCTTCTCTTCTACGTCTTCAACCCATC
AAATCTTCTCGTCCCAACAACTTGTCCATTTCTGCTTCTGCTTCTCCTCC
TTATGACTTGAACACTTTCAAGTTTGACCCCATCAAAGAATCCATTGTTT
CTCGTGAAATGACGCGCAGGTACATGACGGACATGATCACTTATGCTGAC
ACTGATGTGGTAGTGGTTGGTGCTGGCTCTGCTGGCCTCTCTTGTGCTTA
TGAGCTCAGCAAAAAACCCCAACATTCAGATTGCTATTATCGAACAGTCT
GTTAGCCCCGGCGGTGGCGCGTGGCTCAGTGGACAGCTCTTCTCTGCCAT
GGTTGTGCGCAAACCAGCCCACATCTTCCTTGACGAGCTTGGCATCGGCT
ACGATGAGCAAGACAGCCATGTTGTGATCAAGCATGCAGCGCTGTTCACC
TCCACTATAATGAGCAAGCTCCTGGCCCGCCCCACGTCAAGCTCTTTATG
C
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