FC921433

Overview
NameFC921433
Unique NameFC921433
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length703
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921433 vs. ExPASy Swiss-Prot
Match: METN_FUSNN (Methionine import ATP-binding protein metN OS=Fusobacterium nucleatum subsp. nucleatum GN=metN PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.873e-26
Identity = 73/225 (32.44%), Postives = 121/225 (53.78%), Query Frame = 3
Query:    9 HILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDEEIS-GLRIGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKKGENGLANPGNIASYVVVTHQHSTIRRAVDRLIFLYEGKIVWQXMTH 680
            H ++ V+ K+  G+  GIIG SG GKS+++++I  L  P  G+++I G     L   E +    +IG++FQ   L  S TV ENV F L E +    + I + V E L  VGL       PS+LSGG K+RV++AR++       +  P++LL DE T+ LDP  +  + +LI+ + +K            + +++THQ   ++   +++  + +G+IV Q   H
Sbjct:   16 HAVKDVNLKVNEGDIFGIIGLSGAGKSSLIRLINRLEEPTSGKIFINGENILNLNKTELLERRKKIGMIFQHFNLLSSRTVEENVAFAL-EIANWNKKDIGKRVSELLEIVGLSDKAKYYPSQLSGGQKQRVSIARAL-------ANNPDILLSDEATSALDPKTTKSILELIKEIQQKFS---------LTVLMITHQMEVVKEICNKVAIMSDGRIVEQGGVH 223          
BLAST of FC921433 vs. ExPASy Swiss-Prot
Match: METN_CAUCR (Methionine import ATP-binding protein metN OS=Caulobacter crescentus GN=metN PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.873e-26
Identity = 78/224 (34.82%), Postives = 119/224 (53.12%), Query Frame = 3
Query:   15 LRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGL-ISDEEISGLRIGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKKGENGLANPGNIASYVVVTHQHSTIRRAVDRLIFLYEGKIVWQXMTHE 683
            L GVS  ++ GE  G+IG SG GKST++++I GL  P  G+V + G   A L ++       R+G++FQ   L    TV +NV F L    +   E +     E L  VGL     + P++LSGG K+RV +AR++       +  P+VLL DE T+ LDP  +  + DLI  +++  E GL       + V++TH+   +RR  DR+  L  G++V +    E
Sbjct:   19 LSGVSLSVKAGEVFGVIGASGAGKSTLIRLINGLETPSAGQVIVDGDDVAALGVAGLRALRRRVGMIFQHFNLLSGKTVAQNVAFPLKLAGRPAAE-VKARTAELLERVGLSAHAGKYPAQLSGGQKQRVGIARAL-------ATNPKVLLCDEATSALDPETTEQILDLIAGLNR--ELGL-------TIVLITHEMDVVRRVCDRVAVLDAGRVVEEGAVEE 225          
BLAST of FC921433 vs. ExPASy Swiss-Prot
Match: FBPC_ECOLI (Fe(3+) ions import ATP-binding protein fbpC OS=Escherichia coli (strain K12) GN=fbpC PE=3 SV=3)

HSP 1 Score: 119.398 bits (298), Expect = 1.873e-26
Identity = 76/217 (35.02%), Postives = 122/217 (56.22%), Query Frame = 3
Query:   12 ILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDEEISGLRIGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKKGENGLANPGNIASYVVVTHQHSTIRRAVDRLIFLYEGKIV 662
            ++  ++  I  G+ V ++GPSG GK+TIL+++AGL  P +G+++I G      ++   I    I +VFQS ALF  +++ ENVG+ L      R E +   VKE LA V L+G EDR   ++SGG ++RVALAR++I       ++P+VLL+DEP + LD      + D IR + K+ +          + + VTH  S      D ++ + +G I+
Sbjct:   21 VIDNINLTIPQGQMVTLLGPSGCGKTTILRLVAGLEKPSEGQIFIDGED----VTHRSIQQRDICMVFQSYALFPHMSLGENVGYGLKMLGVPRAE-LKARVKEALAMVDLEGFEDRFVDQISGGQQQRVALARALI-------LKPKVLLFDEPLSNLDANLRRSMRDKIRELQKQFD---------ITSLYVTHDQSEAFAVSDTVLVMNKGHIM 216          
BLAST of FC921433 vs. ExPASy Swiss-Prot
Match: FBPC1_ERWCT (Fe(3+) ions import ATP-binding protein fbpC 1 OS=Erwinia carotovora subsp. atroseptica GN=fbpC1 PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.873e-26
Identity = 79/217 (36.41%), Postives = 128/217 (58.99%), Query Frame = 3
Query:   12 ILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDEEISGLRIGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKKGENGLANPGNIASYVVVTHQHSTIRRAVDRLIFLYEGKIV 662
            ++  ++  I  G+ V ++GPSG GK+T+L+ +AGL  P +G+++I G      +++  I    I +VFQS ALF  +++ EN+G+ L    + + E I++ VKE LA V L+G EDR   ++SGG ++RVALAR++I       ++P+VLL+DEP + LD        +L RS+ +K    L    NI S + VTH  S      D ++ + +GKI+
Sbjct:   25 VIDDLNLAIPQGKMVTLLGPSGCGKTTVLRAVAGLEKPTEGQIFIDGED----VTERSIQQRDICMVFQSYALFPHMSLGENIGYGLKMLGRPKAE-INQRVKEALALVDLEGFEDRYVDQISGGQQQRVALARALI-------LKPKVLLFDEPLSNLD-------ANLRRSMREKIRE-LQQQFNITS-LYVTHDQSEAFAVSDMVLVMNKGKIM 220          
BLAST of FC921433 vs. ExPASy Swiss-Prot
Match: CYSA2_AGRT5 (Sulfate/thiosulfate import ATP-binding protein cysA 2 OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=cysA2 PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.873e-26
Identity = 79/230 (34.35%), Postives = 117/230 (50.87%), Query Frame = 3
Query:   15 LRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDEEISGLRIGLVFQSAALFDSLTVRENVGFLLYENSKMRDE-QISELVKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKKGENGLANPGNIASYVVVTHQHSTIRRAVDRLIFLYEGKIVWQXMTHEFTSSSN 701
            +R VS  I  GE + ++GPSG+GK+TIL+++AGL   D G ++        +     +    +G VFQ  ALF  +T+ EN+ F +  +   RD+  I   VKE L  V L G+ DR P+++SGG ++RVALAR++       SV+P+VLL DEP   LD      +   +R +H     G+         + VTH         DR++ L +G IV Q    E     N
Sbjct:   18 VRDVSLDIESGELLALLGPSGSGKTTILRMVAGLEYSDGGRIFFGDEDATNI----PVRDRGVGFVFQHYALFPHMTLHENIAFGMKVSKVKRDKAAIDARVKELLNLVKLDGLGDRFPAQISGGQRQRVALARAL-------SVDPKVLLLDEPFGALDANVRRDLRRWLREIH--DSLGITT-------IFVTHDQEEALDLADRVVILNQGGIVQQGTPKEVCRQPN 227          
BLAST of FC921433 vs. ExPASy Swiss-Prot
Match: METN_LACSS (Methionine import ATP-binding protein metN OS=Lactobacillus sakei subsp. sakei (strain 23K) GN=metN PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.446e-26
Identity = 79/223 (35.43%), Postives = 125/223 (56.05%), Query Frame = 3
Query:   15 LRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDEEISGLR--IGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKKGENGLANPGNIASYVVVTHQHSTIRRAVDRLIFLYEGKIVWQXMT 677
            L  +S KI  GE  GIIG SG GKST+++++ GL  P  G+V + G+   GL S++ +  +R  IG++FQ   L  S T+ EN+   L      + E++++  KE LA V L  +    PSELSGG K+RVA+AR++I        EP +LL DE T+ LDP  +  +  L+  +++  E G+       + V+VTH+   +RR   R+  +  G+++ +  T
Sbjct:   21 LSDISLKIEAGEIYGIIGYSGAGKSTLIRLLNGLEKPTSGDVLVNGQSIVGL-SEQAMRPIRQKIGMIFQHFNLLWSKTILENIALPLKLAGVGKKERLAK-AKEMLALVELTDLGAAYPSELSGGQKQRVAIARALI-------SEPAILLCDEATSALDPKTTNSILSLLAKINQ--EMGI-------TIVLVTHEMDAVRRICQRIAVMAAGRVIEEGTT 225          
BLAST of FC921433 vs. ExPASy Swiss-Prot
Match: METN_BRUSU (Methionine import ATP-binding protein metN OS=Brucella suis GN=metN PE=3 SV=2)

HSP 1 Score: 119.013 bits (297), Expect = 2.446e-26
Identity = 80/220 (36.36%), Postives = 116/220 (52.73%), Query Frame = 3
Query:    3 EKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDE-EISGLRIGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKKGENGLANPGNIASYVVVTHQHSTIRRAVDRLIFLYEGKI 659
            E   + GVS  +  GE +GIIG SG GKST+++ + GL  PD G ++I GR+   L  D       RIG+VFQ   L  + T  +N+   L      + E+I   V E L  VGL       P++LSGG K+RV +AR++       + EP VLL DE T+ LDP  +  +  L++ ++ K   GL       + +++TH+   IRR  DR+I L  G I
Sbjct:   42 ETAAINGVSLSVARGEILGIIGRSGAGKSTLIRCVNGLEKPDTGSIHIEGREITSLDEDALRPVRRRIGMVFQHFNLLSAKTAAQNIALPLKIAGMPKAERIKR-VAELLELVGLSDKASHYPAQLSGGQKQRVGIARAL-------AAEPAVLLSDEATSALDPETTQSILALLKDINAK--LGL-------TILLITHEMDVIRRIADRVIVLDHGLI 244          
BLAST of FC921433 vs. ExPASy Swiss-Prot
Match: METN_BRUME (Methionine import ATP-binding protein metN OS=Brucella melitensis GN=metN PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.446e-26
Identity = 80/220 (36.36%), Postives = 116/220 (52.73%), Query Frame = 3
Query:    3 EKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDE-EISGLRIGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKKGENGLANPGNIASYVVVTHQHSTIRRAVDRLIFLYEGKI 659
            E   + GVS  +  GE +GIIG SG GKST+++ + GL  PD G ++I GR+   L  D       RIG+VFQ   L  + T  +N+   L      + E+I   V E L  VGL       P++LSGG K+RV +AR++       + EP VLL DE T+ LDP  +  +  L++ ++ K   GL       + +++TH+   IRR  DR+I L  G I
Sbjct:   42 ETAAINGVSLSVARGEILGIIGRSGAGKSTLIRCVNGLEKPDTGSIHIEGREITSLDEDALRPVRRRIGMVFQHFNLLSAKTAAQNIALPLKIAGMPKAERIKR-VAELLELVGLSDKASHYPAQLSGGQKQRVGIARAL-------AAEPAVLLSDEATSALDPETTQSILALLKDINAK--LGL-------TILLITHEMDVIRRIADRVIVLDHGLI 244          
BLAST of FC921433 vs. ExPASy Swiss-Prot
Match: METN_BRUAB (Methionine import ATP-binding protein metN OS=Brucella abortus GN=metN PE=3 SV=2)

HSP 1 Score: 119.013 bits (297), Expect = 2.446e-26
Identity = 80/220 (36.36%), Postives = 116/220 (52.73%), Query Frame = 3
Query:    3 EKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDE-EISGLRIGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKKGENGLANPGNIASYVVVTHQHSTIRRAVDRLIFLYEGKI 659
            E   + GVS  +  GE +GIIG SG GKST+++ + GL  PD G ++I GR+   L  D       RIG+VFQ   L  + T  +N+   L      + E+I   V E L  VGL       P++LSGG K+RV +AR++       + EP VLL DE T+ LDP  +  +  L++ ++ K   GL       + +++TH+   IRR  DR+I L  G I
Sbjct:   42 ETAAINGVSLSVARGEILGIIGRSGAGKSTLIRCVNGLEKPDTGSIHIEGREITSLDEDALRPVRRRIGMVFQHFNLLSAKTAAQNIALPLKIAGMPKAERIKR-VAELLELVGLSDKASHYPAQLSGGQKQRVGIARAL-------AAEPAVLLSDEATSALDPETTQSILALLKDINAK--LGL-------TILLITHEMDVIRRIADRVIVLDHGLI 244          
BLAST of FC921433 vs. ExPASy Swiss-Prot
Match: METN_BRUA2 (Methionine import ATP-binding protein metN OS=Brucella abortus (strain 2308) GN=metN PE=3 SV=2)

HSP 1 Score: 119.013 bits (297), Expect = 2.446e-26
Identity = 80/220 (36.36%), Postives = 116/220 (52.73%), Query Frame = 3
Query:    3 EKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDE-EISGLRIGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKKGENGLANPGNIASYVVVTHQHSTIRRAVDRLIFLYEGKI 659
            E   + GVS  +  GE +GIIG SG GKST+++ + GL  PD G ++I GR+   L  D       RIG+VFQ   L  + T  +N+   L      + E+I   V E L  VGL       P++LSGG K+RV +AR++       + EP VLL DE T+ LDP  +  +  L++ ++ K   GL       + +++TH+   IRR  DR+I L  G I
Sbjct:   42 ETAAINGVSLSVARGEILGIIGRSGAGKSTLIRCVNGLEKPDTGSIHIEGREITSLDEDALRPVRRRIGMVFQHFNLLSAKTAAQNIALPLKIAGMPKAERIKR-VAELLELVGLSDKASHYPAQLSGGQKQRVGIARAL-------AAEPAVLLSDEATSALDPETTQSILALLKDINAK--LGL-------TILLITHEMDVIRRIADRVIVLDHGLI 244          
The following BLAST results are available for this feature:
BLAST of FC921433 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METN_FUSNN1.873e-2632.44Methionine import ATP-binding protein metN OS=Fuso... [more]
METN_CAUCR1.873e-2634.82Methionine import ATP-binding protein metN OS=Caul... [more]
FBPC_ECOLI1.873e-2635.02Fe(3+) ions import ATP-binding protein fbpC OS=Esc... [more]
FBPC1_ERWCT1.873e-2636.41Fe(3+) ions import ATP-binding protein fbpC 1 OS=E... [more]
CYSA2_AGRT51.873e-2634.35Sulfate/thiosulfate import ATP-binding protein cys... [more]
METN_LACSS2.446e-2635.43Methionine import ATP-binding protein metN OS=Lact... [more]
METN_BRUSU2.446e-2636.36Methionine import ATP-binding protein metN OS=Bruc... [more]
METN_BRUME2.446e-2636.36Methionine import ATP-binding protein metN OS=Bruc... [more]
METN_BRUAB2.446e-2636.36Methionine import ATP-binding protein metN OS=Bruc... [more]
METN_BRUA22.446e-2636.36Methionine import ATP-binding protein metN OS=Bruc... [more]

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Properties
Property NameValue
Genbank descriptionC32104H07EF RVDevelopN Citrus clementina cDNA clone C32104H07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921433 ID=FC921433; Name=FC921433; organism=Citrus clementina; type=EST; length=703bp
GGGAAAAGCATATATTGAGAGGTGTGAGCTTCAAGATTAGACATGGTGAA
GCTGTTGGTATAATAGGGCCTTCAGGCACTGGGAAATCAACGATTTTAAA
GATTATTGCTGGGCTTCTTGCTCCAGACAAGGGAGAGGTTTACATTCGAG
GTAGGAAGAGAGCTGGTTTGATTAGCGATGAGGAGATATCTGGTCTTCGG
ATTGGATTGGTTTTCCAAAGTGCGGCTCTTTTTGACTCATTGACTGTCCG
GGAAAATGTTGGTTTCCTTCTGTATGAAAATTCGAAGATGCGTGATGAAC
AAATTTCAGAGCTTGTGAAGGAAAATTTGGCTGCTGTTGGATTAAAGGGA
GTTGAGGATCGCTTACCATCTGAGTTGTCTGGTGGAATGAAGAAAAGAGT
TGCTTTAGCTCGATCCATAATTTTCGATAACACAAAGGAATCAGTGGAGC
CAGAGGTGCTGTTGTATGATGAACCTACGGCTGGCCTTGATCCCATTGCA
TCCACTGTAGTTGAAGATCTGATCCGTTCCGTTCATAAGAAAGGTGAAAA
TGGACTTGCGAACCCTGGTAATATTGCTTCCTACGTGGTTGTTACTCACC
AACATAGTACCATTAGAAGAGCTGTTGACAGGTTGATATTCCTCTACGAG
GGTAAGATTGTTTGGCAGGNAATGACCCATGAATTCACATCATCATCCAA
TCC
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