FC921433

Overview
NameFC921433
Unique NameFC921433
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length703
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921433 vs. ExPASy Swiss-Prot
Match: METN_THEFY (Methionine import ATP-binding protein metN OS=Thermobifida fusca (strain YX) GN=metN PE=3 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 3.195e-26
Identity = 79/217 (36.41%), Postives = 117/217 (53.92%), Query Frame = 3
Query:   15 LRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDEEISGLR-IGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKKGENGLANPGNIASYVVVTHQHSTIRRAVDRLIFLYEGKIV 662
            LRGVS  +  GE  G++GPSG GKST+L+ I  L  PD+GE+++ GR    L   +  +  R IG++ Q  AL  S TV  NV F L      R E+    V E L  VGL       P++LSGG K+RV +AR++       +  P VLL DE T+ LDP  +  + DL+R +++  E GL       + +++TH+   ++R  D +  +  G +V
Sbjct:   21 LRGVSLHVPQGEIYGVVGPSGAGKSTLLRCINLLERPDRGEIWVDGRNLTALPPPQLRAARRGIGMIHQHFALLSSRTVAGNVAFPLEIAGVPRAER-RRRVAELLELVGLADKAAAYPAQLSGGQKQRVGIARAL-------APRPTVLLSDEATSALDPATTASILDLLRDLNR--ELGL-------TILLITHEMDVVKRICDAVAIMDRGSVV 220          
BLAST of FC921433 vs. ExPASy Swiss-Prot
Match: METN_RHILO (Methionine import ATP-binding protein metN OS=Rhizobium loti GN=metN PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.195e-26
Identity = 76/218 (34.86%), Postives = 122/218 (55.96%), Query Frame = 3
Query:   21 GVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDEEISGL--RIGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKKGENGLANPGNIASYVVVTHQHSTIRRAVDRLIFLYEGKIVWQ 668
            G+S  +R GE +GIIG SG GKST+++ + GL  PD GEV+I GR+  G + + ++  L  RIG++FQ   L  + TV +NV   L    + + E+++    E L  VGL       P+ LSGG K+RV +AR++       +  P +LL DE T+ LDP  +  +  L++ +++  + GL       + +++TH+   IR   DR+  +  G+IV Q
Sbjct:   43 GISLTVRKGEILGIIGRSGAGKSTLIRCLNGLERPDSGEVFIEGRE-IGRLGERDLQPLRRRIGMIFQHFNLLSAKTVEDNVALPLKIEGRPKAERLAR-AAELLDLVGLSEKARAYPASLSGGQKQRVGIARAL-------AARPALLLSDEATSALDPETTRSILALLKDINR--QLGL-------TILLITHEMEVIRSIADRVAVIDAGRIVEQ 242          
BLAST of FC921433 vs. ExPASy Swiss-Prot
Match: METN_BACHD (Methionine import ATP-binding protein metN OS=Bacillus halodurans GN=metN PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.195e-26
Identity = 79/218 (36.24%), Postives = 124/218 (56.88%), Query Frame = 3
Query:   21 GVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLIS-DEEISGLRIGLVFQSAALFDSLTVRENVGFLLY---ENSKMRDEQISELVKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKKGENGLANPGNIASYVVVTHQHSTIRRAVDRLIFLYEGKIV 662
            GV+ KI  GE  G+IG SG GKST+++++  L  P +G V + G+  + L   D  I   +IG++FQ   L  S TVR+N+ F L       K R++++ EL+      VGL+G E+  PS+LSGG K+RV +AR++       +  P+VLL DE T+ LDP  +  + DL+  +++K   GL       + V++TH+   IR+   R+  +  GK+V
Sbjct:   23 GVNLKINEGEIFGVIGYSGAGKSTLIRMLNMLERPTEGSVIVAGKDLSKLSDRDLRIERQKIGMIFQHFNLLWSRTVRKNIAFPLEIAGVPKKEREKRVDELIN----LVGLEGREEAYPSQLSGGQKQRVGIARAL-------ANNPKVLLCDEATSALDPKTTDSILDLLVDINEK--LGL-------TIVLITHEMHVIRKICHRVAVMEAGKVV 220          
BLAST of FC921433 vs. ExPASy Swiss-Prot
Match: FBPC_PASMU (Fe(3+) ions import ATP-binding protein fbpC OS=Pasteurella multocida GN=fbpC PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.195e-26
Identity = 71/217 (32.72%), Postives = 125/217 (57.60%), Query Frame = 3
Query:   12 ILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDEEISGLRIGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKKGENGLANPGNIASYVVVTHQHSTIRRAVDRLIFLYEGKIV 662
            ++  +   I+ G  V ++GPSG GK+T+L+++AGL +P  G+++I G      ++   I    I +VFQS ALF  +++ +NVG+ L      ++E+ ++ VKE L  V L G EDR   ++SGG ++RVALAR+++       ++P+VLL+DEP + LD      + + IR + ++   G+ +       + VTH  +      D +I +++GKI+
Sbjct:   21 VIDNLDLSIKRGTMVTLLGPSGCGKTTVLRLVAGLESPTSGQIFIDGED----VTKSSIQNRDICIVFQSYALFPHMSIGDNVGYGLKMQGVSKEER-AKRVKEALELVDLAGFEDRYVDQISGGQQQRVALARALV-------LKPKVLLFDEPLSNLDANLRRSMREKIRELQQR--LGITS-------LYVTHDQTEAFAVSDEVIVMHKGKIM 216          
BLAST of FC921433 vs. ExPASy Swiss-Prot
Match: FBPC1_RHIME (Fe(3+) ions import ATP-binding protein fbpC 1 OS=Rhizobium meliloti GN=fbpC1 PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.195e-26
Identity = 81/220 (36.82%), Postives = 119/220 (54.09%), Query Frame = 3
Query:   24 VSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDEEISGLRIGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKKGENGLANPGNIASYVVVTHQHSTIRRAVDRLIFLYEGKIVWQXMTHE 683
            +S  I  G  V ++GPSG GK+T L+++AGL  P  G + I G+    L ++E      + +VFQS ALF  +   +NV + L E+S MR ++  E  +E LA VGL G+  RLP+ELSGG ++RVA+AR+++       +EP+VLL DEP + LD      V   IR + ++        G  A Y  VTH         DR+I + +G I  +    E
Sbjct:   27 LSLTIEPGTLVTLLGPSGCGKTTTLRMLAGLEHPTSGRILIGGKDVTMLPANER----DVSMVFQSYALFPHMNALDNVAYGL-ESSGMRRKEARERAEEGLALVGLPGMGQRLPAELSGGQQQRVAVARALV-------LEPQVLLLDEPLSNLDARLRRRVRTEIRELQQR-------LGFTAVY--VTHDQDEALAVSDRIIVMKDGNIAQEGPPRE 225          
BLAST of FC921433 vs. ExPASy Swiss-Prot
Match: CYSA_PSEPK (Sulfate/thiosulfate import ATP-binding protein cysA OS=Pseudomonas putida (strain KT2440) GN=cysA PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.195e-26
Identity = 79/218 (36.24%), Postives = 120/218 (55.05%), Query Frame = 3
Query:   15 LRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDEEISGLRIGLVFQSAALFDSLTVRENVGFLLY---ENSKMRDEQISELVKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKKGENGLANPGNIASYVVVTHQHSTIRRAVDRLIFLYEGKI 659
            L  ++  I  GE V ++GPSG GK+T+L+IIAGL  PD+G +   G      +S  ++    +G VFQ  ALF  ++V +NV F L    +  +  + +I+E V E L  V L  + DR P +LSGG ++R+ALAR++       +VEP+VLL DEP   LD   + V ++L R + +  E+      N+ S V VTH         DR++ + +G I
Sbjct:   18 LNAINLDINSGELVALLGPSGCGKTTLLRIIAGLETPDQGNIVFHGED----VSGHDVRDRNVGFVFQHYALFRHMSVFDNVAFGLRMKPKGERPSESKIAEKVHELLNMVQLDWLSDRYPEQLSGGQRQRIALARAL-------AVEPKVLLLDEPFGALD---AKVRKELRRWLARLHED-----INLTS-VFVTHDQEEAMEVADRIVVMNKGVI 215          
BLAST of FC921433 vs. ExPASy Swiss-Prot
Match: CYSA_BRUSU (Sulfate/thiosulfate import ATP-binding protein cysA OS=Brucella suis GN=cysA PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.195e-26
Identity = 76/218 (34.86%), Postives = 117/218 (53.67%), Query Frame = 3
Query:   15 LRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDEEISGLRIGLVFQSAALFDSLTVRENVGFLLY---ENSKMRDEQISELVKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKKGENGLANPGNIASYVVVTHQHSTIRRAVDRLIFLYEGKI 659
            L  VS  I+ GE + ++GPSG+GK+T+L++IAGL  P +G ++  G + A   S + +    +G VFQ  ALF  +TV +N+GF L      ++    +I     E L  V L G+E R P++LSGG ++RVALAR++       ++EP VLL DEP   LD      +   +R +H K  +         + V VTH         DR++ + +G+I
Sbjct:   18 LHNVSLTIQSGELIALLGPSGSGKTTLLRLIAGLETPTEGMIFF-GDEDA---SQKSVQERNVGFVFQHYALFRHMTVADNIGFGLKVRPGGTRPSTAEIRRRALELLDLVQLSGLEKRYPAQLSGGQRQRVALARAM-------AIEPRVLLLDEPFGALDAQVRKELRRWLREIHDKTGH---------TTVFVTHDQDEALELADRVVVMSQGRI 215          
BLAST of FC921433 vs. ExPASy Swiss-Prot
Match: CYSA_BRUME (Sulfate/thiosulfate import ATP-binding protein cysA OS=Brucella melitensis GN=cysA PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.195e-26
Identity = 76/218 (34.86%), Postives = 117/218 (53.67%), Query Frame = 3
Query:   15 LRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDEEISGLRIGLVFQSAALFDSLTVRENVGFLLY---ENSKMRDEQISELVKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKKGENGLANPGNIASYVVVTHQHSTIRRAVDRLIFLYEGKI 659
            L  VS  I+ GE + ++GPSG+GK+T+L++IAGL  P +G ++  G + A   S + +    +G VFQ  ALF  +TV +N+GF L      ++    +I     E L  V L G+E R P++LSGG ++RVALAR++       ++EP VLL DEP   LD      +   +R +H K  +         + V VTH         DR++ + +G+I
Sbjct:   18 LHNVSLTIQSGELIALLGPSGSGKTTLLRLIAGLETPTEGMIFF-GDEDA---SQKSVQERNVGFVFQHYALFRHMTVADNIGFGLKVRPGGTRPSTAEIRRRALELLDLVQLSGLEKRYPAQLSGGQRQRVALARAM-------AIEPRVLLLDEPFGALDAQVRKELRRWLREIHDKTGH---------TTVFVTHDQDEALELADRVVVMSQGRI 215          
BLAST of FC921433 vs. ExPASy Swiss-Prot
Match: FBPC_PHOLL (Fe(3+) ions import ATP-binding protein fbpC OS=Photorhabdus luminescens subsp. laumondii GN=fbpC PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 4.173e-26
Identity = 80/217 (36.87%), Postives = 123/217 (56.68%), Query Frame = 3
Query:   12 ILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDEEISGLRIGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKKGENGLANPGNIASYVVVTHQHSTIRRAVDRLIFLYEGKIV 662
            ++  +   I  G  V ++GPSG GK+T+L+++AGL  P  G+++I G      ++D  I    I +VFQS ALF  +++ EN+G+ L    + + E I E VKE L  V L G EDR   ++SGG ++RVALAR++I       ++P+VLL+DEP + LD        +L RS+ +K    L    NI S + VTH  S      D ++ + +GKI+
Sbjct:   21 VIDNLELSIPQGHMVTLLGPSGCGKTTVLRLVAGLEKPSAGKIFIDGED----VTDRSIQQRDICMVFQSYALFPHMSLGENIGYGLKMLGQPKAE-IRERVKEALELVDLGGFEDRYVDQISGGQQQRVALARALI-------LKPKVLLFDEPLSNLD-------ANLRRSMREKIRE-LQQQFNITS-LYVTHDQSEAFAVSDAVLVMNKGKIM 216          
BLAST of FC921433 vs. ExPASy Swiss-Prot
Match: POTA_TRIEI (Spermidine/putrescine import ATP-binding protein potA OS=Trichodesmium erythraeum (strain IMS101) GN=potA PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 5.449e-26
Identity = 75/215 (34.88%), Postives = 118/215 (54.88%), Query Frame = 3
Query:   15 LRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDEEISGLRIGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKKGENGLANPGNIASYVVVTHQHSTIRRAVDRLIFLYEGKI 659
            ++GV F IR GE   I+GPSG GK+T L++IAG   P  GE+ IRG+     +S        +  VFQS ALF+ L+V++N+ F L    ++   +  E V + L  V ++   DR P+++SGG ++RVALAR+++         P VLL DEP   LD      ++  + ++HK  + G+       ++V+VTH         DR+  ++EG+I
Sbjct:   34 VKGVDFNIRQGEFFSILGPSGCGKTTTLRLIAGFETPSAGEIIIRGQS----MSQTPAYRRPVNTVFQSYALFNHLSVKDNIAFGL-RIKRLGKTETEEKVAQALQLVKMEKFADRYPNQISGGQQQRVALARALV-------NRPAVLLLDEPLGALDLKLRKQMQMELSNIHK--DLGV-------TFVMVTHDQQEAMSMSDRIAVMHEGRI 227          
The following BLAST results are available for this feature:
BLAST of FC921433 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METN_THEFY3.195e-2636.41Methionine import ATP-binding protein metN OS=Ther... [more]
METN_RHILO3.195e-2634.86Methionine import ATP-binding protein metN OS=Rhiz... [more]
METN_BACHD3.195e-2636.24Methionine import ATP-binding protein metN OS=Baci... [more]
FBPC_PASMU3.195e-2632.72Fe(3+) ions import ATP-binding protein fbpC OS=Pas... [more]
FBPC1_RHIME3.195e-2636.82Fe(3+) ions import ATP-binding protein fbpC 1 OS=R... [more]
CYSA_PSEPK3.195e-2636.24Sulfate/thiosulfate import ATP-binding protein cys... [more]
CYSA_BRUSU3.195e-2634.86Sulfate/thiosulfate import ATP-binding protein cys... [more]
CYSA_BRUME3.195e-2634.86Sulfate/thiosulfate import ATP-binding protein cys... [more]
FBPC_PHOLL4.173e-2636.87Fe(3+) ions import ATP-binding protein fbpC OS=Pho... [more]
POTA_TRIEI5.449e-2634.88Spermidine/putrescine import ATP-binding protein p... [more]

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Properties
Property NameValue
Genbank descriptionC32104H07EF RVDevelopN Citrus clementina cDNA clone C32104H07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921433 ID=FC921433; Name=FC921433; organism=Citrus clementina; type=EST; length=703bp
GGGAAAAGCATATATTGAGAGGTGTGAGCTTCAAGATTAGACATGGTGAA
GCTGTTGGTATAATAGGGCCTTCAGGCACTGGGAAATCAACGATTTTAAA
GATTATTGCTGGGCTTCTTGCTCCAGACAAGGGAGAGGTTTACATTCGAG
GTAGGAAGAGAGCTGGTTTGATTAGCGATGAGGAGATATCTGGTCTTCGG
ATTGGATTGGTTTTCCAAAGTGCGGCTCTTTTTGACTCATTGACTGTCCG
GGAAAATGTTGGTTTCCTTCTGTATGAAAATTCGAAGATGCGTGATGAAC
AAATTTCAGAGCTTGTGAAGGAAAATTTGGCTGCTGTTGGATTAAAGGGA
GTTGAGGATCGCTTACCATCTGAGTTGTCTGGTGGAATGAAGAAAAGAGT
TGCTTTAGCTCGATCCATAATTTTCGATAACACAAAGGAATCAGTGGAGC
CAGAGGTGCTGTTGTATGATGAACCTACGGCTGGCCTTGATCCCATTGCA
TCCACTGTAGTTGAAGATCTGATCCGTTCCGTTCATAAGAAAGGTGAAAA
TGGACTTGCGAACCCTGGTAATATTGCTTCCTACGTGGTTGTTACTCACC
AACATAGTACCATTAGAAGAGCTGTTGACAGGTTGATATTCCTCTACGAG
GGTAAGATTGTTTGGCAGGNAATGACCCATGAATTCACATCATCATCCAA
TCC
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